CmoCh04G013730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G013730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box family protein
LocationCmo_Chr04 : 7003901 .. 7004867 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTCCTTGAAACGAAAATCTCAAGCTCTTGACTCTCAAATTTCACGGTACGTTAACTTAATTTTTGCATGCATGTTTTTTTTATTAATAAAAATTATTTGATTATTTTTCGTCAATGAGTTTTGAATAATAAATTTATTACGGCGGTTGTGACATGTTTTTGCCAATTTGGTGGCGGCTCGAGCTCTTCTTTAAGTTTGTTTCCCTCTAATTTATGATGTGTAGGATAACCAAGATGGCGCGTTTCAGTGATTTCCCACCAACCATAGAATCACTCCCAAACGATTTATTGATCGAAGTTCTGGCAAAAGTGGCCGCTTTTTCATTCACGGATTTAGTCCAAGCCAAATTAGCCACCAAGGAATTTCTCGAAGTATCAAGTCATGGCTACATATTCCAGCACGCGTCCCTTAGAAACTTTCAGAAACTTCTATGGAACAACAACCCAGAGTTTTGGTCGTTCATGGAAAAATGCAACAACAACGGAAATCCAGAGACTCTATACCAGAAGGGAATGTTGGAATTCTTCACCCATTGTAAAGAAGCTTCTGGAATGGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAGCGAGTTCGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGGAGAGTTAAAGAACTTGTTCGTTATCTTTGGGTTAAGAACAAAATTTCTTTGTCGGAAAAGGATTCCAGTGATCAGAGGGGCTGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATGGGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGTGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGAAGTTATGATATGCTGTAG

mRNA sequence

ATGGCCGGTTCCTTGAAACGAAAATCTCAAGCTCTTGACTCTCAAATTTCACGGATAACCAAGATGGCGCGTTTCAGTGATTTCCCACCAACCATAGAATCACTCCCAAACGATTTATTGATCGAAGTTCTGGCAAAAGTGGCCGCTTTTTCATTCACGGATTTAGTCCAAGCCAAATTAGCCACCAAGGAATTTCTCGAAGTATCAAGTCATGGCTACATATTCCAGCACGCGTCCCTTAGAAACTTTCAGAAACTTCTATGGAACAACAACCCAGAGTTTTGGTCGTTCATGGAAAAATGCAACAACAACGGAAATCCAGAGACTCTATACCAGAAGGGAATGTTGGAATTCTTCACCCATTGTAAAGAAGCTTCTGGAATGGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAGCGAGTTCGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGGAGAGTTAAAGAACTTGTTCGTTATCTTTGGGTTAAGAACAAAATTTCTTTGTCGGAAAAGGATTCCAGTGATCAGAGGGGCTGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATGGGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGTGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGAAGTTATGATATGCTGTAG

Coding sequence (CDS)

ATGGCCGGTTCCTTGAAACGAAAATCTCAAGCTCTTGACTCTCAAATTTCACGGATAACCAAGATGGCGCGTTTCAGTGATTTCCCACCAACCATAGAATCACTCCCAAACGATTTATTGATCGAAGTTCTGGCAAAAGTGGCCGCTTTTTCATTCACGGATTTAGTCCAAGCCAAATTAGCCACCAAGGAATTTCTCGAAGTATCAAGTCATGGCTACATATTCCAGCACGCGTCCCTTAGAAACTTTCAGAAACTTCTATGGAACAACAACCCAGAGTTTTGGTCGTTCATGGAAAAATGCAACAACAACGGAAATCCAGAGACTCTATACCAGAAGGGAATGTTGGAATTCTTCACCCATTGTAAAGAAGCTTCTGGAATGGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAGCGAGTTCGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGGAGAGTTAAAGAACTTGTTCGTTATCTTTGGGTTAAGAACAAAATTTCTTTGTCGGAAAAGGATTCCAGTGATCAGAGGGGCTGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATGGGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGTGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGAAGTTATGATATGCTGTAG
Homology
[Close]
BLAST of CmoCh04G013730 vs. Swiss-Prot
Match: FB79_ARATH (Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWNNN 91
           ++SLP DLL+E+ +   A S + +   +L +K F  +    Y+F   SL+  + L W+ N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  PEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGYSEACYVYGIIL- 151
                F+E+C  + NPE L+QKG + +F    +  G+ YL  +A+KG  EA YVYG+IL 
Sbjct: 84  SA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 152 -YAASSEDEGVKFLKICEAKLGF----KLAECRRRVKEL-VRYLWVKNKISLSEKDSSDQ 211
                ++ +G + L     +L      +L E R +++++   + W  N +    K +   
Sbjct: 144 CLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYVS 203

Query: 212 RGCESVVKNCCKKNVRRIGWD-GNDEDDYYGEHTCEV 241
             C+   K      V   GW    DE D      CE+
Sbjct: 204 EKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACEL 238

[Close]
BLAST of CmoCh04G013730 vs. Swiss-Prot
Match: FB127_ARATH (F-box protein At2g35280 OS=Arabidopsis thaliana GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06
Identity = 38/138 (27.54%), Postives = 66/138 (47.83%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWNNN 91
           +E+LP DLL E++AK+   S  D     L+ KE    ++   + +  +L    K   +  
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLSCR 70

Query: 92  PEFWSFMEKCNNNGNPETLYQKGMLEFFT--HCKEASGMAYLKLSAQKGYSEACYVYGII 151
                 M+KC  N NP+  Y KG++ +F   HC     + ++ ++A  G  EA Y+Y ++
Sbjct: 71  KHLL-IMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMYAML 130

Query: 152 LYAASSEDEGVKFLKICE 168
           L      +EG  ++   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

[Close]
BLAST of CmoCh04G013730 vs. TrEMBL
Match: A0A0A0LS96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.7e-91
Identity = 169/255 (66.27%), Postives = 201/255 (78.82%), Query Frame = 1 

Query: 6   KRKSQALDSQISRITKMARFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKE 65
           KR S ALD+QISRIT+  +     PT I+SLPNDLL EVLAKVA  S+ DL+QAKLATK 
Sbjct: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66

Query: 66  FLEVSSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKE 125
           FLE S+  YIFQH SL NF+ LLWNN+P+FWSFME CNN+ NPE+LY+KGMLEFFTHCKE
Sbjct: 67  FLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126

Query: 126 ASGMAYLKLSAQKGYSEACYVYGIILYAASSEDEGVKFLKICEAKLGFKLAECRRRVKEL 185
           ASGMAYLK SAQKGY +ACYV+G+ILYA++ +DEG++FLK  E KLG K+ ECR+RVKE 
Sbjct: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186

Query: 186 VRYLWVKNKISLSEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEVCKWN 245
           V Y+W+KNKISLSE DSS  R C+  +   C+ N +   WD  DEDDYYG++TCE CKWN
Sbjct: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246

Query: 246 EEVSRFCNMLRTGSY 260
            EV RFC MLRTG +
Sbjct: 247 NEVLRFCKMLRTGRF 259

[Close]
BLAST of CmoCh04G013730 vs. TrEMBL
Match: A5AV49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 95/246 (38.62%), Postives = 138/246 (56.10%), Query Frame = 1 

Query: 21  KMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASL 80
           K  + + +  TIESL +DLLIEVL +VA+ SFTDL  AKL+ + FLE S   ++ ++ S+
Sbjct: 4   KKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNISI 63

Query: 81  RNFQKL-LWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGY 140
             F  +  W    E  SF++ C  +GNPE LY++GM+EFF+  K  S   YLK + + G+
Sbjct: 64  EKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEMGH 123

Query: 141 SEACYVYGIILYAA---SSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISL 200
            EA YVYGIIL      S+E++G+K L     K   KL ECR+R +     +W++N I  
Sbjct: 124 MEASYVYGIILLCKGGDSNEEQGMKLLN--AVKKSRKLGECRKRTRAFTLSMWIRNPIVK 183

Query: 201 SEKDSSDQRGCESVVKNCCKKNVRRIG------WDGNDED-DYYGEHTCEVCKWNEEVSR 256
            ++ +S           C ++N   IG      W  +DED D    + CE C W++EVS 
Sbjct: 184 CQELTSYH------ANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEVSL 241

[Close]
BLAST of CmoCh04G013730 vs. TrEMBL
Match: B9I6Z5_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 90/247 (36.44%), Postives = 138/247 (55.87%), Query Frame = 1 

Query: 19  ITKMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHA 78
           +TK  R +      +  P DLL EVLA+VA+ S +DL  AKL+ KEFLE +S  YIF+H 
Sbjct: 1   MTKGRRKTSRHEFFKYFPKDLLTEVLARVASASISDLFTAKLSCKEFLEAASENYIFEHI 60

Query: 79  SLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKG 138
           ++     + W  +    SF+ +C  NGNPE L+++GM+EFF+  K  SG  +LK +A+KG
Sbjct: 61  TIEKLPVIPWRISHGASSFLARCKENGNPEALFRQGMVEFFSSNKPESGFQHLKNAARKG 120

Query: 139 YSEACYVYGIIL--YAASSEDEGVKFLKICE--AKLGFKLAECRRRVKELVRYLWVKNKI 198
           + EA Y  G+IL  +    + EG++ L   +        + ECR ++KE+++ +W+  + 
Sbjct: 121 HVEAIYTCGVILVCHGGQFKQEGIELLSSLKNYKSRHRTIKECRDKIKEILQSMWIDRRE 180

Query: 199 S--LSEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEVCKWNEEVSRFCN 258
           +    E+  S  R C     NC K N R  GW   DE++Y    TC+ C W+ E + FC 
Sbjct: 181 AGIGPEEPKSHGRTC-----NCSKFNKR--GW--IDEEEY---TTCDYCVWDHEATLFCK 235

Query: 259 MLRTGSY 260
           +LR   +
Sbjct: 241 ILRARGF 235

[Close]
BLAST of CmoCh04G013730 vs. TrEMBL
Match: A0A061G0Z9_THECC (F-box family protein, putative OS=Theobroma cacao GN=TCM_014925 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 81/232 (34.91%), Postives = 126/232 (54.31%), Query Frame = 1 

Query: 30  PTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWN 89
           P I SLPN+L+ EVLA+VAA+SF D    KL+ K F +++   YI QH SL  F    W 
Sbjct: 77  PNIFSLPNELMTEVLARVAAYSFHDFFDVKLSCKVFHQIADDKYILQHVSLEKFPVTPWC 136

Query: 90  NNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGYSEACYVYGII 149
           +  + + F+EKC  +G+PE LY++G++E F+  +   G+  L  +A+ G+  A YV G+I
Sbjct: 137 STKQSF-FLEKCKRSGHPEALYREGVVEHFSFARVEEGLNCLNSAAKVGHLGASYVLGVI 196

Query: 150 LYAA---SSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSEKDSSDQRG 209
           L        E +G + LK+ ++K G +  E R+++ + +R +W+ N +            
Sbjct: 197 LLCTEEPDQEQDGRRLLKLEKSKKGVR--ESRKKLNDTIRNIWLNNLLEGK--------- 256

Query: 210 CESVVKNCC---KKNVRRIGWDGNDEDDYYGEHTCEVCKWNEEVSRFCNMLR 256
                 NCC    ++ RR GW  ++EDD      CE C  + EV   CN+LR
Sbjct: 257 -----PNCCPMRDQHRRRRGWPSDNEDDV----DCEACGCDLEVIFVCNLLR 287

[Close]
BLAST of CmoCh04G013730 vs. TrEMBL
Match: G7JLH1_MEDTR (F-box plant-like protein OS=Medicago truncatula GN=MTR_4g119850 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 85/237 (35.86%), Postives = 128/237 (54.01%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQ--KLLWN 91
           +++LPNDLL+ ++ KVA+ S  DL + KL+ KEFL  S  GY++QHA++  F    L W 
Sbjct: 25  VKTLPNDLLVNIVGKVASRSMADLCKIKLSCKEFLNASEDGYVYQHAAMDKFALVPLPWF 84

Query: 92  NNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGYSEACYVYGII 151
            + +  SF+ +C  +GN E  Y++GM+++F+      G+  LK +A +G+ EA YVY ++
Sbjct: 85  TDEKETSFLSRCKESGNLEITYREGMVQYFSTLMVDLGLKNLKKAALEGHHEAKYVYSML 144

Query: 152 LYAASSEDEGVK--FLKICEAK--LGFKLAECRRRVKELVRYLWVKNKI-------SLSE 211
           L A   ++EG K  F    E K   G  +  CR+RVK  ++ +WVKN +       SL  
Sbjct: 145 LMANCDDEEGRKLGFDLFGELKNSTGITIVGCRKRVKSFIQSMWVKNVVVAQNQGLSLCS 204

Query: 212 KDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEVCKWNEEVSRFCNMLR 256
             +      E VV    KK+      D +D DD  G   C+ C  N E+S F  M R
Sbjct: 205 SSTCHNPKTEKVV---VKKHSTWF-MDESDNDDDVG--VCKYCDGNYELSLFSKMFR 255

[Close]
BLAST of CmoCh04G013730 vs. TAIR10
Match: AT1G67623.1 (AT1G67623.1 F-box family protein)

HSP 1 Score: 91.7 bits (226), Expect = 7.4e-19
Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWNNN 91
           ++SLP DLL+E+ +   A S + +   +L +K F  +    Y+F   SL+  + L W+ N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  PEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGYSEACYVYGIIL- 151
                F+E+C  + NPE L+QKG + +F    +  G+ YL  +A+KG  EA YVYG+IL 
Sbjct: 84  SA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 152 -YAASSEDEGVKFLKICEAKLGF----KLAECRRRVKEL-VRYLWVKNKISLSEKDSSDQ 211
                ++ +G + L     +L      +L E R +++++   + W  N +    K +   
Sbjct: 144 CLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYVS 203

Query: 212 RGCESVVKNCCKKNVRRIGWD-GNDEDDYYGEHTCEV 241
             C+   K      V   GW    DE D      CE+
Sbjct: 204 EKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACEL 238

[Close]
BLAST of CmoCh04G013730 vs. TAIR10
Match: AT1G74875.1 (AT1G74875.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15
Identity = 62/237 (26.16%), Postives = 106/237 (44.73%), Query Frame = 1 

Query: 37  NDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWNNNPEFWS 96
           N   I ++  V + S ++    +L +K F  +S+  YI Q  SL     L W N  +F +
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHN 76

Query: 97  FMEKCNNNGNPETLYQKGMLEFF---THCKEAS-GMAYLKLSAQKGYSEACYVYGIILYA 156
           F ++C  +GN E +Y+KG++++F   +H ++   G+ ++  +A  G  EA YVYG+IL  
Sbjct: 77  FFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILIC 136

Query: 157 ASSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSEKDSSDQRGC----E 216
              + +          + GFK+      +  L + L + N I   EK  +  R      E
Sbjct: 137 LGGKTK----------QNGFKI------LSSLRKPLMLSNTIKEMEKHRTHIRNMWWWGE 196

Query: 217 SVVKNCCKKNVR-RIGWDG--------------NDEDDYYGEHTCEVCKWNEEVSRF 251
            ++++  K  VR     DG               ++DD      CE+C  + EV  F
Sbjct: 197 PMMRHLQKSYVRENCNCDGRTEIFPNYCFRHRFGEDDDMLTSSACEICLCHHEVKLF 237

[Close]
BLAST of CmoCh04G013730 vs. TAIR10
Match: AT2G35280.1 (AT2G35280.1 F-box family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-07
Identity = 38/138 (27.54%), Postives = 66/138 (47.83%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKLLWNNN 91
           +E+LP DLL E++AK+   S  D     L+ KE    ++   + +  +L    K   +  
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLSCR 70

Query: 92  PEFWSFMEKCNNNGNPETLYQKGMLEFFT--HCKEASGMAYLKLSAQKGYSEACYVYGII 151
                 M+KC  N NP+  Y KG++ +F   HC     + ++ ++A  G  EA Y+Y ++
Sbjct: 71  KHLL-IMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMYAML 130

Query: 152 LYAASSEDEGVKFLKICE 168
           L      +EG  ++   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

[Close]
BLAST of CmoCh04G013730 vs. NCBI nr
Match: gi|449439561|ref|XP_004137554.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 5.2e-91
Identity = 169/255 (66.27%), Postives = 201/255 (78.82%), Query Frame = 1 

Query: 6   KRKSQALDSQISRITKMARFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLVQAKLATKE 65
           KR S ALD+QISRIT+  +     PT I+SLPNDLL EVLAKVA  S+ DL+QAKLATK 
Sbjct: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66

Query: 66  FLEVSSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKE 125
           FLE S+  YIFQH SL NF+ LLWNN+P+FWSFME CNN+ NPE+LY+KGMLEFFTHCKE
Sbjct: 67  FLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126

Query: 126 ASGMAYLKLSAQKGYSEACYVYGIILYAASSEDEGVKFLKICEAKLGFKLAECRRRVKEL 185
           ASGMAYLK SAQKGY +ACYV+G+ILYA++ +DEG++FLK  E KLG K+ ECR+RVKE 
Sbjct: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186

Query: 186 VRYLWVKNKISLSEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEVCKWN 245
           V Y+W+KNKISLSE DSS  R C+  +   C+ N +   WD  DEDDYYG++TCE CKWN
Sbjct: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246

Query: 246 EEVSRFCNMLRTGSY 260
            EV RFC MLRTG +
Sbjct: 247 NEVLRFCKMLRTGRF 259

[Close]
BLAST of CmoCh04G013730 vs. NCBI nr
Match: gi|659107472|ref|XP_008453691.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 2.7e-87
Identity = 169/260 (65.00%), Postives = 195/260 (75.00%), Query Frame = 1 

Query: 1   MAGSLKRKSQALDSQISRITKMARFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLVQAK 60
           MA   K KS    + ISR T+  R     PT I+SLPNDLL EVLAKVAA S+ DLVQAK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKEFLEVSSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFF 120
           LATK+FLE S   YIFQH SL NF+  LWNN+PEFWSF+E CNNN NPE+LY+KGMLEFF
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGNFENHLWNNSPEFWSFIETCNNNENPESLYRKGMLEFF 120

Query: 121 THCKEASGMAYLKLSAQKGYSEACYVYGIILYAASSEDEGVKFLKICEAKLGFKLAECRR 180
           THCKEASG+AYLKLSAQKGY +ACYV  +ILYA+ ++DEG +FLK  EAKL  K+AECR 
Sbjct: 121 THCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAECRW 180

Query: 181 RVKELVRYLWVKNKISLSEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCE 240
           RVK  V YLW+KN+IS S +D +D R C+  +   C+ N RR  WD  DEDDYYGE+TCE
Sbjct: 181 RVKRFVSYLWIKNRISSSGEDPND-RKCDKNIN--CRVNERRNSWDWKDEDDYYGEYTCE 240

Query: 241 VCKWNEEVSRFCNMLRTGSY 260
            CKWN EV RFC MLRTG Y
Sbjct: 241 KCKWNNEVFRFCKMLRTGRY 257

[Close]
BLAST of CmoCh04G013730 vs. NCBI nr
Match: gi|449435498|ref|XP_004135532.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 3.1e-83
Identity = 164/262 (62.60%), Postives = 195/262 (74.43%), Query Frame = 1 

Query: 1   MAGSLKRKSQ-ALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAK 60
           MA  LKRKS+ + +SQIS  TK          I SLPNDLLIEVLAKVAA S+ DLVQAK
Sbjct: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60

Query: 61  LATKEFLEVSSHGYIFQHASLRN--FQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLE 120
           LATK FL  S+ GYIFQH SL N  F+ LLWNN P+  SFME  NNN NPE+LY+KG +E
Sbjct: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120

Query: 121 FFTHCKEASGMAYLKLSAQKGYSEACYVYGIILYAASSEDEGVKFLKICEAKLGFKLAEC 180
           FF+H KEASG++YLK SAQKGY +ACYVYG+++YAA+ ++EGV++LK+CEAKLG K+AEC
Sbjct: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180

Query: 181 RRRVKELVRYLWVKNKISLSEKDSSDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHT 240
           RRRVKE V Y W+KN+IS+S++  S+           CK N R  GWD  DEDDYYGEHT
Sbjct: 181 RRRVKEFVWYFWIKNRISMSKEICSNVN---------CKVNERSNGWDWKDEDDYYGEHT 240

Query: 241 CEVCKWNEEVSRFCNMLRTGSY 260
           CE CKW+ EV RFCNMLR G Y
Sbjct: 241 CEQCKWSNEVLRFCNMLRRGGY 253

[Close]
BLAST of CmoCh04G013730 vs. NCBI nr
Match: gi|147773103|emb|CAN71689.1| (hypothetical protein VITISV_039291 [Vitis vinifera])

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 95/246 (38.62%), Postives = 138/246 (56.10%), Query Frame = 1 

Query: 21  KMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASL 80
           K  + + +  TIESL +DLLIEVL +VA+ SFTDL  AKL+ + FLE S   ++ ++ S+
Sbjct: 4   KKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNISI 63

Query: 81  RNFQKL-LWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGY 140
             F  +  W    E  SF++ C  +GNPE LY++GM+EFF+  K  S   YLK + + G+
Sbjct: 64  EKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEMGH 123

Query: 141 SEACYVYGIILYAA---SSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISL 200
            EA YVYGIIL      S+E++G+K L     K   KL ECR+R +     +W++N I  
Sbjct: 124 MEASYVYGIILLCKGGDSNEEQGMKLLN--AVKKSRKLGECRKRTRAFTLSMWIRNPIVK 183

Query: 201 SEKDSSDQRGCESVVKNCCKKNVRRIG------WDGNDED-DYYGEHTCEVCKWNEEVSR 256
            ++ +S           C ++N   IG      W  +DED D    + CE C W++EVS 
Sbjct: 184 CQELTSYH------ANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEVSL 241

[Close]
BLAST of CmoCh04G013730 vs. NCBI nr
Match: gi|731376767|ref|XP_010656578.1| (PREDICTED: putative F-box protein At1g67623 [Vitis vinifera])

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 95/244 (38.93%), Postives = 134/244 (54.92%), Query Frame = 1 

Query: 31  TIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEVSSHGYIFQHASLRNFQKL-LWN 90
           TIE LP+DLLIEVL +VA  SFTDL  AKL+ + FLE S   +I ++ S+  F  +  W 
Sbjct: 14  TIEYLPSDLLIEVLTRVATSSFTDLFNAKLSCRNFLEASDDKFIMKNISIEKFPAIPWWQ 73

Query: 91  NNPEFWSFMEKCNNNGNPETLYQKGMLEFFTHCKEASGMAYLKLSAQKGYSEACYVYGII 150
              E  SF++ C  +GNPE LY++GM+EFF+  K  SG  YLK + +  + EA YVYGII
Sbjct: 74  VKDEVSSFLKACKESGNPEALYRQGMMEFFSWKKVESGEEYLKRALEMEHMEASYVYGII 133

Query: 151 LY---AASSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSEKDSSDQRG 210
           L      S+E++G+K L     K   KL ECR++ K  +  +W++N I            
Sbjct: 134 LLCKGGESNEEQGMKLLN--AVKKSRKLGECRKKTKAFILSMWIRNPIV----------K 193

Query: 211 CESVV----KNCCKKNVRRIG-------W----DGNDEDDYYGEHTCEVCKWNEEVSRFC 256
           C+ +V    K C ++N   IG       W    + N++ D    + CE C W +EVS FC
Sbjct: 194 CQELVNHHAKTCGRRNNGGIGGKRGWWQWIDDREDNEDKDVEEVNYCEGCMWEDEVSLFC 245

The following BLAST results are available for this feature:
BLAST of CmoCh04G013730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB79_ARATH1.3e-1729.03Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1[more]
FB127_ARATH5.2e-0627.54F-box protein At2g35280 OS=Arabidopsis thaliana GN=At2g35280 PE=2 SV=1[more]
BLAST of CmoCh04G013730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS96_CUCSA3.7e-9166.27Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1[more]
A5AV49_VITVI1.7e-3538.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1[more]
B9I6Z5_POPTR4.5e-3336.44F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1[more]
A0A061G0Z9_THECC2.6e-2834.91F-box family protein, putative OS=Theobroma cacao GN=TCM_014925 PE=4 SV=1[more]
G7JLH1_MEDTR1.7e-2735.86F-box plant-like protein OS=Medicago truncatula GN=MTR_4g119850 PE=4 SV=1[more]
BLAST of CmoCh04G013730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67623.17.4e-1929.03 F-box family protein[more]
AT1G74875.13.8e-1526.16 FUNCTIONS IN: molecular_function unknown[more]
AT2G35280.12.9e-0727.54 F-box family protein[more]
BLAST of CmoCh04G013730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439561|ref|XP_004137554.1|5.2e-9166.27PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|659107472|ref|XP_008453691.1|2.7e-8765.00PREDICTED: putative F-box protein At1g67623 [Cucumis melo][more]
gi|449435498|ref|XP_004135532.1|3.1e-8362.60PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|147773103|emb|CAN71689.1|2.4e-3538.62hypothetical protein VITISV_039291 [Vitis vinifera][more]
gi|731376767|ref|XP_010656578.1|1.2e-3438.93PREDICTED: putative F-box protein At1g67623 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G013730.1CmoCh04G013730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 102..161
score: 2.
NoneNo IPR availablePANTHERPTHR33784FAMILY NOT NAMEDcoord: 17..259
score: 1.0
NoneNo IPR availablePANTHERPTHR33784:SF4SUBFAMILY NOT NAMEDcoord: 17..259
score: 1.0
NoneNo IPR availableunknownSSF81901HCP-likecoord: 88..164
score: 3.0