CmaCh04G013070 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G013070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionF-box family protein
LocationCma_Chr04 : 6653706 .. 6654670 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGTACGTTAGCTTAATTTTTGCATGTATGCTTTTTTATTAATAAAAATTATTTGATTGTTTTTCGTCAAGAGTTTTGAATAATAAATTTATTACCGTGGTTGTGACCTGCTTCTGTCAATTTGGTGGCTGCTAGAGCTCTTCTTTAAGTTTGTTTCCCTCTAATTTATGATGTGTAGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

mRNA sequence

ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

Coding sequence (CDS)

ATGGCCGGTTTCCTGAATCCAAAATCACAGGCTCTTGACTCTCAAATTTCACGGACAACTAAGATGATGCGTTTCAGTGATTTTCCACCGACCATAGAATCACTCCCAAACGATTTATTGATTGAAGTTCTAGCAAAAGTTGCTGCTTTTTCATTCACGGACTTAATCCAAGCCAAATTAGCCACCAAGGATTTTCTCAAAGCATCAAGTCATGGCTACATATTCGAGCACGCGTCCTTTGGAAACTTCCATAAGCTTCTATGGAAAAACAGCATAGAGTTTTGGTCGTTCATGGAAAAATGTAACAACAACGGAAACCCAGAGACTCTATACCAGACGGGAATGTTGGAATTCTTCACCCATTCTAGAGAAGCTTTTGGAATAGCATATTTAAAGCTTTCTGCCCAAAAAGGCTACCCGAAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGTTTAAATTGGCTGAATGTCGTCGAAGAGTTAGGGAATTTGTTCGTTATCTTTGGATTAAGAACAAGATTTCTTTGCCGAAAAAGGATTTCGTTGATCAGAGGGGCAGTGAGAGTGTGGTTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGGTGAGAACGATGAGGATGATTATTATGGAGAACACACGTGTGAAGCGTGTAAATGGAATGAAGAAGTTTCGAGATTTTGTAATATGCTTAGAACCGGGAGTTATGATATGTTGTAG

Protein sequence

MAGFLNPKSQALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYDML
Homology
[Close]
BLAST of CmaCh04G013070 vs. Swiss-Prot
Match: FB79_ARATH (Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
           ++SLP DLL+E+ +   A S + +   +L +K F +     Y+F   S      L W +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
           S +F   +E+C  + NPE L+Q G + +F    +  G+ YL  +A+KG  +A YVYG+IL
Sbjct: 84  SAKF---IERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140

[Close]
BLAST of CmaCh04G013070 vs. TrEMBL
Match: A0A0A0LS96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.9e-82
Identity = 156/252 (61.90%), Postives = 189/252 (75.00%), Query Frame = 1 

Query: 9   SQALDSQISRTTKMMRFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLK 68
           S ALD+QISR T+  +     PT I+SLPNDLL EVLAKVA  S+ DLIQAKLATK FL+
Sbjct: 10  SVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLE 69

Query: 69  ASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFG 128
           AS+  YIF+H S GNF  LLW NS +FWSFME CNN+ NPE+LY+ GMLEFFTH +EA G
Sbjct: 70  ASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASG 129

Query: 129 IAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRY 188
           +AYLK SAQKGY  ACYV+G+ILYA++L+DEG++FLK  E KLG K+ ECR+RV+EFV Y
Sbjct: 130 MAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEFVSY 189

Query: 189 LWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEV 248
           +WIKNKISL + D    R  +  +   C+ N +   W   DEDDYYG++TCE CKWN EV
Sbjct: 190 IWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWNNEV 249

Query: 249 SRFCNMLRTGSY 260
            RFC MLRTG +
Sbjct: 250 LRFCKMLRTGRF 259

[Close]
BLAST of CmaCh04G013070 vs. TrEMBL
Match: A5AV49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-35
Identity = 97/246 (39.43%), Postives = 138/246 (56.10%), Query Frame = 1 

Query: 21  KMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASF 80
           K  + + +  TIESL +DLLIEVL +VA+ SFTDL  AKL+ ++FL+AS   ++ ++ S 
Sbjct: 4   KKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNISI 63

Query: 81  GNFHKL-LWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGY 140
             F  +  W+   E  SF++ C  +GNPE LY+ GM+EFF+  +      YLK + + G+
Sbjct: 64  EKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEMGH 123

Query: 141 PKACYVYGIILY---ATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISL 200
            +A YVYGIIL      S E++G+K L     K   KL ECR+R R F   +WI+N I  
Sbjct: 124 MEASYVYGIILLCKGGDSNEEQGMKLLN--AVKKSRKLGECRKRTRAFTLSMWIRNPI-- 183

Query: 201 PKKDFVDQRGSESVVKNCCKKNVRRIG------WGENDED-DYYGEHTCEACKWNEEVSR 256
                  Q  +      C ++N   IG      W E+DED D    + CEAC W++EVS 
Sbjct: 184 ----VKCQELTSYHANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEVSL 241

[Close]
BLAST of CmaCh04G013070 vs. TrEMBL
Match: B9I6Z5_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 82/228 (35.96%), Postives = 128/228 (56.14%), Query Frame = 1 

Query: 36  PNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFW 95
           P DLL EVLA+VA+ S +DL  AKL+ K+FL+A+S  YIFEH +      + W+ S    
Sbjct: 18  PKDLLTEVLARVASASISDLFTAKLSCKEFLEAASENYIFEHITIEKLPVIPWRISHGAS 77

Query: 96  SFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL--YAT 155
           SF+ +C  NGNPE L++ GM+EFF+ ++   G  +LK +A+KG+ +A Y  G+IL  +  
Sbjct: 78  SFLARCKENGNPEALFRQGMVEFFSSNKPESGFQHLKNAARKGHVEAIYTCGVILVCHGG 137

Query: 156 SLEDEGVKFLKICE--AKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQRGSESVV 215
             + EG++ L   +        + ECR +++E ++ +WI  + +    +     G     
Sbjct: 138 QFKQEGIELLSSLKNYKSRHRTIKECRDKIKEILQSMWIDRREAGIGPEEPKSHGRTC-- 197

Query: 216 KNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSY 260
            NC K N R  GW   DE++Y    TC+ C W+ E + FC +LR   +
Sbjct: 198 -NCSKFNKR--GW--IDEEEY---TTCDYCVWDHEATLFCKILRARGF 235

[Close]
BLAST of CmaCh04G013070 vs. TrEMBL
Match: I1KMZ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G247800 PE=4 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 9.8e-28
Identity = 84/228 (36.84%), Postives = 121/228 (53.07%), Query Frame = 1 

Query: 31  TIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFH--KLLW 90
           TI+SLP +L +E+ AKVA  S  D    KL  K+FL A+   Y++ HAS  NF    L W
Sbjct: 21  TIKSLPKELQVEIFAKVATRSIFDHCMIKLCCKEFLHAAEDDYVYRHASMENFALVPLPW 80

Query: 91  KNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGI 150
               +  SF+++C  +GN E LY+ GML++FT SR   G+  LK +A +G+  A YVY +
Sbjct: 81  FTGNKESSFLKRCRESGNSEILYREGMLQYFTSSRVELGLKNLKEAALEGHDDAKYVYCM 140

Query: 151 ILYATSLEDEGVK---FLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQR 210
           +L     EDEG +   F   C  K    +  CR+RV+ FVR +W+KNK +  K  F    
Sbjct: 141 LLMCG--EDEGQRKQGFDLFCSLKESTSVIRCRKRVKSFVRSMWLKNKPN-GKSSFCGSG 200

Query: 211 GSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNM 254
             +S  +    K      W   ++ D  G  +C+ C  + E+  FCNM
Sbjct: 201 TCDSERQKQLSKR-----WSSFEDKD--GGISCQRCGADHELGFFCNM 238

[Close]
BLAST of CmaCh04G013070 vs. TrEMBL
Match: A0A0B2P0Z6_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_009836 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.8e-28
Identity = 84/228 (36.84%), Postives = 121/228 (53.07%), Query Frame = 1 

Query: 31  TIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFH--KLLW 90
           TI+SLP +L +E+ AKVA  S  D    KL  K+FL A+   Y++ HAS  NF    L W
Sbjct: 21  TIKSLPKELQVEIFAKVATRSIFDHCMIKLCCKEFLHAAEDDYVYRHASMENFALVPLPW 80

Query: 91  KNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGI 150
               +  SF+++C  +GN E LY+ GML++FT SR   G+  LK +A +G+  A YVY +
Sbjct: 81  FTGNKESSFLKRCRESGNSEILYREGMLQYFTSSRVELGLKNLKEAALEGHDDAKYVYCM 140

Query: 151 ILYATSLEDEGVK---FLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQR 210
           +L     EDEG +   F   C  K    +  CR+RV+ FVR +W+KNK +  K  F    
Sbjct: 141 LLMCG--EDEGQRKQGFDLFCSLKESTSVIRCRKRVKSFVRSMWLKNKPN-GKSSFCGSG 200

Query: 211 GSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRFCNM 254
             +S  +    K      W   ++ D  G  +C+ C  + E+  FCNM
Sbjct: 201 TCDSERQKQLSKR-----WSSFEDKD--GGISCQRCGADHELGFFCNM 238

[Close]
BLAST of CmaCh04G013070 vs. TAIR10
Match: AT1G67623.1 (AT1G67623.1 F-box family protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 1 

Query: 32  IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLW-KN 91
           ++SLP DLL+E+ +   A S + +   +L +K F +     Y+F   S      L W +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 92  SIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGIIL 151
           S +F   +E+C  + NPE L+Q G + +F    +  G+ YL  +A+KG  +A YVYG+IL
Sbjct: 84  SAKF---IERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 140

[Close]
BLAST of CmaCh04G013070 vs. TAIR10
Match: AT1G74875.1 (AT1G74875.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 57/229 (24.89%), Postives = 104/229 (45.41%), Query Frame = 1 

Query: 37  NDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWS 96
           N   I ++  V + S ++    +L +K F + S+  YI +  S      L W+N  +F +
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHN 76

Query: 97  FMEKCNNNGNPETLYQTGMLEFF---THSREA-FGIAYLKLSAQKGYPKACYVYGIILYA 156
           F ++C  +GN E +Y+ G++++F   +H R+   G+ ++  +A  G  +A YVYG+IL  
Sbjct: 77  FFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILIC 136

Query: 157 T--SLEDEGVKFLKICEAKLGF-----KLAECRRRVREFVRYLWIKNKISLPKKDFVDQR 216
                +  G K L      L       ++ + R  +R    + W +  +   +K +V + 
Sbjct: 137 LGGKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNM--WWWGEPMMRHLQKSYVREN 196

Query: 217 ----GSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEVSRF 251
               G   +  N C ++  R G    ++DD      CE C  + EV  F
Sbjct: 197 CNCDGRTEIFPNYCFRH--RFG----EDDDMLTSSACEICLCHHEVKLF 237

[Close]
BLAST of CmaCh04G013070 vs. NCBI nr
Match: gi|449439561|ref|XP_004137554.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 9.9e-82
Identity = 156/252 (61.90%), Postives = 189/252 (75.00%), Query Frame = 1 

Query: 9   SQALDSQISRTTKMMRFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLK 68
           S ALD+QISR T+  +     PT I+SLPNDLL EVLAKVA  S+ DLIQAKLATK FL+
Sbjct: 10  SVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKHFLE 69

Query: 69  ASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFG 128
           AS+  YIF+H S GNF  LLW NS +FWSFME CNN+ NPE+LY+ GMLEFFTH +EA G
Sbjct: 70  ASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKEASG 129

Query: 129 IAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRY 188
           +AYLK SAQKGY  ACYV+G+ILYA++L+DEG++FLK  E KLG K+ ECR+RV+EFV Y
Sbjct: 130 MAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEFVSY 189

Query: 189 LWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCEACKWNEEV 248
           +WIKNKISL + D    R  +  +   C+ N +   W   DEDDYYG++TCE CKWN EV
Sbjct: 190 IWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWNNEV 249

Query: 249 SRFCNMLRTGSY 260
            RFC MLRTG +
Sbjct: 250 LRFCKMLRTGRF 259

[Close]
BLAST of CmaCh04G013070 vs. NCBI nr
Match: gi|659107472|ref|XP_008453691.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 6.4e-81
Identity = 159/260 (61.15%), Postives = 186/260 (71.54%), Query Frame = 1 

Query: 1   MAGFLNPKSQALDSQISRTTKMMRFSDFPPT-IESLPNDLLIEVLAKVAAFSFTDLIQAK 60
           MA     KS    + ISRTT+  R     PT I+SLPNDLL EVLAKVAA S+ DL+QAK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKDFLKASSHGYIFEHASFGNFHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFF 120
           LATK FL+AS   YIF+H S GNF   LW NS EFWSF+E CNNN NPE+LY+ GMLEFF
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGNFENHLWNNSPEFWSFIETCNNNENPESLYRKGMLEFF 120

Query: 121 THSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAECRR 180
           TH +EA G+AYLKLSAQKGY  ACYV  +ILYA+  +DEG +FLK  EAKL  K+AECR 
Sbjct: 121 THCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAECRW 180

Query: 181 RVREFVRYLWIKNKISLPKKDFVDQRGSESVVKNCCKKNVRRIGWGENDEDDYYGEHTCE 240
           RV+ FV YLWIKN+IS   +D  D++  +++    C+ N RR  W   DEDDYYGE+TCE
Sbjct: 181 RVKRFVSYLWIKNRISSSGEDPNDRKCDKNI---NCRVNERRNSWDWKDEDDYYGEYTCE 240

Query: 241 ACKWNEEVSRFCNMLRTGSY 260
            CKWN EV RFC MLRTG Y
Sbjct: 241 KCKWNNEVFRFCKMLRTGRY 257

[Close]
BLAST of CmaCh04G013070 vs. NCBI nr
Match: gi|449435498|ref|XP_004135532.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-78
Identity = 156/263 (59.32%), Postives = 188/263 (71.48%), Query Frame = 1 

Query: 1   MAGFLNPKSQ-ALDSQISRTTKMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAK 60
           MA  L  KS+ + +SQIS  TK M        I SLPNDLLIEVLAKVAA S+ DL+QAK
Sbjct: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60

Query: 61  LATKDFLKASSHGYIFEHASFGN--FHKLLWKNSIEFWSFMEKCNNNGNPETLYQTGMLE 120
           LATK FL AS+ GYIF+H S  N  F  LLW N+ +  SFME  NNN NPE+LY+ G +E
Sbjct: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120

Query: 121 FFTHSREAFGIAYLKLSAQKGYPKACYVYGIILYATSLEDEGVKFLKICEAKLGFKLAEC 180
           FF+H +EA G++YLK SAQKGY  ACYVYG+++YA +L++EGV++LK+CEAKLG K+AEC
Sbjct: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180

Query: 181 RRRVREFVRYLWIKNKISLPKKDFVDQRGSESVVKNC-CKKNVRRIGWGENDEDDYYGEH 240
           RRRV+EFV Y WIKN+IS+          S+ +  N  CK N R  GW   DEDDYYGEH
Sbjct: 181 RRRVKEFVWYFWIKNRISM----------SKEICSNVNCKVNERSNGWDWKDEDDYYGEH 240

Query: 241 TCEACKWNEEVSRFCNMLRTGSY 260
           TCE CKW+ EV RFCNMLR G Y
Sbjct: 241 TCEQCKWSNEVLRFCNMLRRGGY 253

[Close]
BLAST of CmaCh04G013070 vs. NCBI nr
Match: gi|147773103|emb|CAN71689.1| (hypothetical protein VITISV_039291 [Vitis vinifera])

HSP 1 Score: 156.8 bits (395), Expect = 5.3e-35
Identity = 97/246 (39.43%), Postives = 138/246 (56.10%), Query Frame = 1 

Query: 21  KMMRFSDFPPTIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASF 80
           K  + + +  TIESL +DLLIEVL +VA+ SFTDL  AKL+ ++FL+AS   ++ ++ S 
Sbjct: 4   KKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNISI 63

Query: 81  GNFHKL-LWKNSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGY 140
             F  +  W+   E  SF++ C  +GNPE LY+ GM+EFF+  +      YLK + + G+
Sbjct: 64  EKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEMGH 123

Query: 141 PKACYVYGIILY---ATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISL 200
            +A YVYGIIL      S E++G+K L     K   KL ECR+R R F   +WI+N I  
Sbjct: 124 MEASYVYGIILLCKGGDSNEEQGMKLLN--AVKKSRKLGECRKRTRAFTLSMWIRNPI-- 183

Query: 201 PKKDFVDQRGSESVVKNCCKKNVRRIG------WGENDED-DYYGEHTCEACKWNEEVSR 256
                  Q  +      C ++N   IG      W E+DED D    + CEAC W++EVS 
Sbjct: 184 ----VKCQELTSYHANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEVSL 241

[Close]
BLAST of CmaCh04G013070 vs. NCBI nr
Match: gi|731376767|ref|XP_010656578.1| (PREDICTED: putative F-box protein At1g67623 [Vitis vinifera])

HSP 1 Score: 150.6 bits (379), Expect = 3.8e-33
Identity = 92/240 (38.33%), Postives = 135/240 (56.25%), Query Frame = 1 

Query: 31  TIESLPNDLLIEVLAKVAAFSFTDLIQAKLATKDFLKASSHGYIFEHASFGNFHKL-LWK 90
           TIE LP+DLLIEVL +VA  SFTDL  AKL+ ++FL+AS   +I ++ S   F  +  W+
Sbjct: 14  TIEYLPSDLLIEVLTRVATSSFTDLFNAKLSCRNFLEASDDKFIMKNISIEKFPAIPWWQ 73

Query: 91  NSIEFWSFMEKCNNNGNPETLYQTGMLEFFTHSREAFGIAYLKLSAQKGYPKACYVYGII 150
              E  SF++ C  +GNPE LY+ GM+EFF+  +   G  YLK + +  + +A YVYGII
Sbjct: 74  VKDEVSSFLKACKESGNPEALYRQGMMEFFSWKKVESGEEYLKRALEMEHMEASYVYGII 133

Query: 151 LY---ATSLEDEGVKFLKICEAKLGFKLAECRRRVREFVRYLWIKNKISLPKKDFVDQRG 210
           L      S E++G+K L     K   KL ECR++ + F+  +WI+N I +  ++ V+   
Sbjct: 134 LLCKGGESNEEQGMKLLN--AVKKSRKLGECRKKTKAFILSMWIRNPI-VKCQELVNHH- 193

Query: 211 SESVVKNCCKKNVRRIG-------W----GENDEDDYYGEHTCEACKWNEEVSRFCNMLR 256
                K C ++N   IG       W     +N++ D    + CE C W +EVS FC + R
Sbjct: 194 ----AKTCGRRNNGGIGGKRGWWQWIDDREDNEDKDVEEVNYCEGCMWEDEVSLFCKLFR 245

The following BLAST results are available for this feature:
BLAST of CmaCh04G013070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB79_ARATH2.0e-1335.00Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1[more]
BLAST of CmaCh04G013070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS96_CUCSA6.9e-8261.90Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1[more]
A5AV49_VITVI3.7e-3539.43Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1[more]
B9I6Z5_POPTR1.2e-3035.96F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1[more]
I1KMZ2_SOYBN9.8e-2836.84Uncharacterized protein OS=Glycine max GN=GLYMA_07G247800 PE=4 SV=2[more]
A0A0B2P0Z6_GLYSO9.8e-2836.84Putative F-box protein OS=Glycine soja GN=glysoja_009836 PE=4 SV=1[more]
BLAST of CmaCh04G013070 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67623.11.1e-1435.00 F-box family protein[more]
AT1G74875.11.2e-1324.89 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmaCh04G013070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439561|ref|XP_004137554.1|9.9e-8261.90PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|659107472|ref|XP_008453691.1|6.4e-8161.15PREDICTED: putative F-box protein At1g67623 [Cucumis melo][more]
gi|449435498|ref|XP_004135532.1|6.6e-7859.32PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|147773103|emb|CAN71689.1|5.3e-3539.43hypothetical protein VITISV_039291 [Vitis vinifera][more]
gi|731376767|ref|XP_010656578.1|3.8e-3338.33PREDICTED: putative F-box protein At1g67623 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013070.1CmaCh04G013070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 61..154
score: 1.
NoneNo IPR availablePANTHERPTHR33784FAMILY NOT NAMEDcoord: 17..259
score: 5.2
NoneNo IPR availablePANTHERPTHR33784:SF4SUBFAMILY NOT NAMEDcoord: 17..259
score: 5.2
NoneNo IPR availableunknownSSF81901HCP-likecoord: 59..161
score: 2.6