CmoCh04G012470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTATTTCCTCATCTGCTGCCGCCGCCGTTCCGCCGCCGTTTTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGGAGCTCCGGCGAGAAGCCGATCTTCTTCCTCCTCGTGTCCTCTGATGAGAAATTCTTCCGAAAGGAGATGTTCTTTTACAAGAAAATGTGCAAAATTGGTGAAGGAACAGAGGGCTCGATTTTACATCATGAGGCGCTGTGTTACCATGCTCATTTGTTGGCATAACTACAGCGATTCCTGA ATGGCTTCTATTTCCTCATCTGCTGCCGCCGCCGTTCCGCCGCCGTTTTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGGAGCTCCGGCGAGAAGCCGATCTTCTTCCTCCTCGTGTCCTCTGATGAGAAATTCTTCCGAAAGGAGATGTTCTTTTACAAGAAAATGTGCAAAATTGGTGAAGGAACAGAGGGCTCGATTTTACATCATGAGGCGCTGTGTTACCATGCTCATTTGTTGGCATAACTACAGCGATTCCTGA ATGGCTTCTATTTCCTCATCTGCTGCCGCCGCCGTTCCGCCGCCGTTTTACATGGAGGAGAAATGGAAGCTGCCCAAGAAGGGAGCTCCGGCGAGAAGCCGATCTTCTTCCTCCTCGTGTCCTCTGATGAGAAATTCTTCCGAAAGGAGATGTTCTTTTACAAGAAAATGTGCAAAATTGGTGAAGGAACAGAGGGCTCGATTTTACATCATGAGGCGCTGTGTTACCATGCTCATTTGTTGGCATAACTACAGCGATTCCTGA
BLAST of CmoCh04G012470 vs. TrEMBL
Match: A0A0A0KQA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G182670 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 5.0e-37 Identity = 82/91 (90.11%), Postives = 85/91 (93.41%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TrEMBL
Match: F6HNW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01890 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-24 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TrEMBL
Match: A5BGF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024942 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-24 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TrEMBL
Match: M5X652_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024599mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TrEMBL
Match: B9HTG9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s20930g PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.4e-23 Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TAIR10
Match: AT2G39705.1 (AT2G39705.1 ROTUNDIFOLIA like 8) HSP 1 Score: 90.1 bits (222), Expect = 7.2e-19 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TAIR10
Match: AT2G29125.1 (AT2G29125.1 ROTUNDIFOLIA like 2) HSP 1 Score: 65.5 bits (158), Expect = 1.9e-11 Identity = 43/93 (46.24%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TAIR10
Match: AT5G59510.1 (AT5G59510.1 ROTUNDIFOLIA like 5) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-10 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TAIR10
Match: AT3G55515.1 (AT3G55515.1 ROTUNDIFOLIA like 7) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-10 Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1
BLAST of CmoCh04G012470 vs. TAIR10
Match: AT1G07490.1 (AT1G07490.1 ROTUNDIFOLIA like 3) HSP 1 Score: 58.2 bits (139), Expect = 3.0e-09 Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 1
BLAST of CmoCh04G012470 vs. NCBI nr
Match: gi|659123484|ref|XP_008461687.1| (PREDICTED: uncharacterized protein LOC103500229 [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 1.1e-37 Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 1
BLAST of CmoCh04G012470 vs. NCBI nr
Match: gi|700195385|gb|KGN50562.1| (hypothetical protein Csa_5G182670 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 7.2e-37 Identity = 82/91 (90.11%), Postives = 85/91 (93.41%), Query Frame = 1
BLAST of CmoCh04G012470 vs. NCBI nr
Match: gi|694352127|ref|XP_009357749.1| (PREDICTED: uncharacterized protein LOC103948440 [Pyrus x bretschneideri]) HSP 1 Score: 120.6 bits (301), Expect = 1.4e-24 Identity = 62/88 (70.45%), Postives = 73/88 (82.95%), Query Frame = 1
BLAST of CmoCh04G012470 vs. NCBI nr
Match: gi|225449460|ref|XP_002283227.1| (PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 1
BLAST of CmoCh04G012470 vs. NCBI nr
Match: gi|147798371|emb|CAN67911.1| (hypothetical protein VITISV_024942 [Vitis vinifera]) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-24 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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