CmoCh04G008060 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTCAGATCAGAAGGCAGCGATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGAGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCCCAGATTTCCAAGTAAATATTTATTGCTTTCTTGTTCCATGTTTTATTCTAAATCAACAATGTCGTGCCAAATTTTTAGGGGTTTTTTTTTTTCTTTTTAACTAATTTAGGCTCAAATATTTATGTAGGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACAAAGCCGGCGACGCAGCCACAAAAACCACACACACAATCGGCACAGCAGCTTCAGGTAATCAAACCGAATTGTCAAAACCCATTATTTAATGATTATTTAATTCTGTTGTCCGTACATTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGAGCTTGACGCCCGGCTCTGTCTTTTTTGTATTGATTTTCATTTCATTTTATTTTTGGGTCTAGGCTGAGTTGTAAAATATTCATTATTGTTTGATACTGTCTTAACGACATTCTTCTTCTCATGAATAATTGTTCCTATAATTTAGGATTCATAATTTTAATGTTTCTTGAGTTTGTTCTTCCAAACAATTGATTATTACAAATGCATCATACTCTGTTTCGATGTATGTCCGGCTAGGAAAATGGGCTTTCTATATATATATTATGG CTTTTCAGATCAGAAGGCAGCGATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGAGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCCCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACAAAGCCGGCGACGCAGCCACAAAAACCACACACACAATCGGCACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGAGCTTGACGCCCGGCTCTGTCTTTTTTGTATTGATTTTCATTTCATTTTATTTTTGGGTCTAGGCTGAGTTGTAAAATATTCATTATTGTTTGATACTGTCTTAACGACATTCTTCTTCTCATGAATAATTGTTCCTATAATTTAGGATTCATAATTTTAATGTTTCTTGAGTTTGTTCTTCCAAACAATTGATTATTACAAATGCATCATACTCTGTTTCGATGTATGTCCGGCTAGGAAAATGGGCTTTCTATATATATATTATGG ATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGAGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCCCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACAAAGCCGGCGACGCAGCCACAAAAACCACACACACAATCGGCACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA
BLAST of CmoCh04G008060 vs. TrEMBL
Match: A0A0A0KUJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046680 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.1e-41 Identity = 118/222 (53.15%), Postives = 150/222 (67.57%), Query Frame = 1
BLAST of CmoCh04G008060 vs. TrEMBL
Match: A0A0A0KY19_CUCSA (Late embryogenesis abundant OS=Cucumis sativus GN=Csa_4G046700 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.1e-13 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1
BLAST of CmoCh04G008060 vs. TrEMBL
Match: D7SPC8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01890 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-12 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 1
BLAST of CmoCh04G008060 vs. TrEMBL
Match: U5GF96_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12410g PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.5e-12 Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 1
BLAST of CmoCh04G008060 vs. TrEMBL
Match: U5GC14_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12410g PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10 Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 1
BLAST of CmoCh04G008060 vs. NCBI nr
Match: gi|449457638|ref|XP_004146555.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 3.0e-41 Identity = 118/222 (53.15%), Postives = 150/222 (67.57%), Query Frame = 1
BLAST of CmoCh04G008060 vs. NCBI nr
Match: gi|659102352|ref|XP_008452083.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]) HSP 1 Score: 174.5 bits (441), Expect = 1.9e-40 Identity = 119/222 (53.60%), Postives = 151/222 (68.02%), Query Frame = 1
BLAST of CmoCh04G008060 vs. NCBI nr
Match: gi|659102350|ref|XP_008452082.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]) HSP 1 Score: 94.4 bits (233), Expect = 2.6e-16 Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 1
BLAST of CmoCh04G008060 vs. NCBI nr
Match: gi|449457538|ref|XP_004146505.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1
BLAST of CmoCh04G008060 vs. NCBI nr
Match: gi|297735145|emb|CBI17507.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 80.5 bits (197), Expect = 3.8e-12 Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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