CmoCh02G010310 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G010310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCDGSH iron-sulfur domain-containing protein 2A
LocationCmo_Chr02 : 6272136 .. 6272980 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTATGTTGTTTGGATTAGGGAAGAAGGACGTGTCAAAGGGAGATCCACCGATTAGGCCGGTTTAAGGCACCTTTAAACCGTGCCCTCCACACGTTCATCATCCATTACCACATTTCCTTCACTCACATCACCACCCTTCCTCTGCTCCTCCAATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGGTACCCATTATTTTTAAACAAGTACGGAGAAAAATGTTGAAAGTTAAGGGACTAAATTGAAAATTATGAACAGAGTAGGGACTAAGCTGAAATAAACAAGTTTTGTTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAGAGACACACTCTTTCATGTTTTTTCTTCCAACTTCTTCTCTGTTCTTGAGTTTCAATTGGATTACTGTCAACAAATCATTCTACTTTTATTTGCATTCCCATCCCTCATCTTTATAAGATTATCAATTTACTCCTTATCACCCTTCAAATCTTGCATACAACTCCCACCGCCCCATAAACGTTTGATCTTTATTGCTATATTTCAATTTTTTTAAGTCGTTTTTAGTCCTTCTATTCTCAAAATTGCTCTCATTCGCAAATTCTAC

mRNA sequence

TATTATGTTGTTTGGATTAGGGAAGAAGGACGTGTCAAAGGGAGATCCACCGATTAGGCCGGTTTAAGGCACCTTTAAACCGTGCCCTCCACACGTTCATCATCCATTACCACATTTCCTTCACTCACATCACCACCCTTCCTCTGCTCCTCCAATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAGAGACACACTCTTTCATGTTTTTTCTTCCAACTTCTTCTCTGTTCTTGAGTTTCAATTGGATTACTGTCAACAAATCATTCTACTTTTATTTGCATTCCCATCCCTCATCTTTATAAGATTATCAATTTACTCCTTATCACCCTTCAAATCTTGCATACAACTCCCACCGCCCCATAAACGTTTGATCTTTATTGCTATATTTCAATTTTTTTAAGTCGTTTTTAGTCCTTCTATTCTCAAAATTGCTCTCATTCGCAAATTCTAC

Coding sequence (CDS)

ATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAG
Homology
[Close]
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match: NEET_ARATH (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana GN=NEET PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 1 

Query: 27  RRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86
           +++ +VVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHV
Sbjct: 31  KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 90

Query: 87  KHNKATGDNVGPLLLKKQ 105
           KHNKA GDNVGPLLLKKQ
Sbjct: 91  KHNKANGDNVGPLLLKKQ 108

[Close]
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match: CISD2_DANRE (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio GN=cisd2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 1 

Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match: CISD2_BOVIN (CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.5e-17
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL      YCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match: CISD2_HUMAN (CDGSH iron-sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.5e-17
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL      YCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match: CID2B_XENLA (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.5e-17
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1 

Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]
BLAST of CmoCh02G010310 vs. TrEMBL
Match: W9S1F7_9ROSA (CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis GN=L484_012960 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-31
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1 

Query: 29  RMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKH 88
           R +VVVRAEG QAINP IRKSE+KVVDSVVV +L+KPLTPYCRCWRS TFPLCDGSHVKH
Sbjct: 43  RRLVVVRAEG-QAINPEIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKH 102

Query: 89  NKATGDNVGPLLLKKQ 105
           NKATGDNVGPLLLKKQ
Sbjct: 103 NKATGDNVGPLLLKKQ 117

[Close]
BLAST of CmoCh02G010310 vs. TrEMBL
Match: A0A0A0KL88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171700 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-30
Identity = 76/106 (71.70%), Postives = 83/106 (78.30%), Query Frame = 1 

Query: 3   SLPATSALPTTRPP--HGNFTVGGMPRRRMVVVVRAEGGQA---INPAIRKSEDKVVDSV 62
           S P++S   +TRP     NF   G   RR  VVVRAEGG +   INPAIRKSEDKVVDSV
Sbjct: 8   SSPSSSL--STRPHLLSRNFNDNG---RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSV 67

Query: 63  VVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 104
           +V +L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 68  LVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]
BLAST of CmoCh02G010310 vs. TrEMBL
Match: R0GC72_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027417mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-29
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 1 

Query: 27  RRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86
           +++ VVVVRAEGG  INP IRK+E+KVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHV
Sbjct: 29  KKQRVVVVRAEGGGGINPEIRKNEEKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 88

Query: 87  KHNKATGDNVGPLLLKKQ 105
           KHNKA GDNVGPLLLKKQ
Sbjct: 89  KHNKANGDNVGPLLLKKQ 106

[Close]
BLAST of CmoCh02G010310 vs. TrEMBL
Match: A0A0D2SC25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G009100 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-29
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 1 

Query: 26  PRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSH 85
           PRR   +VVRAEG Q INP IRK+E+KVVDSVVV +L+KPLT YCRCWRS TFPLCDG H
Sbjct: 38  PRRSSAMVVRAEG-QTINPEIRKTEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGGH 97

Query: 86  VKHNKATGDNVGPLLLKKQ 105
           VKHNKATGDNVGPLLLKKQ
Sbjct: 98  VKHNKATGDNVGPLLLKKQ 115

[Close]
BLAST of CmoCh02G010310 vs. TrEMBL
Match: A0A067JHV2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26204 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-29
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 1 

Query: 29  RMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKH 88
           R +V VRAE  QAINP IRK E+KVVDSV+VA+L+KPLTPYCRCWRS TFPLCDGSHVKH
Sbjct: 33  RRMVAVRAEA-QAINPEIRKDEEKVVDSVLVAELSKPLTPYCRCWRSGTFPLCDGSHVKH 92

Query: 89  NKATGDNVGPLLLKKQ 105
           NKATGDNVGPLLLKKQ
Sbjct: 93  NKATGDNVGPLLLKKQ 107

[Close]
BLAST of CmoCh02G010310 vs. TAIR10
Match: AT5G51720.1 (AT5G51720.1 2 iron, 2 sulfur cluster binding)

HSP 1 Score: 137.1 bits (344), Expect = 6.1e-33
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 1 

Query: 27  RRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86
           +++ +VVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHV
Sbjct: 31  KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 90

Query: 87  KHNKATGDNVGPLLLKKQ 105
           KHNKA GDNVGPLLLKKQ
Sbjct: 91  KHNKANGDNVGPLLLKKQ 108

[Close]
BLAST of CmoCh02G010310 vs. NCBI nr
Match: gi|703147526|ref|XP_010109084.1| (CDGSH iron-sulfur domain-containing protein 2A [Morus notabilis])

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1 

Query: 29  RMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKH 88
           R +VVVRAEG QAINP IRKSE+KVVDSVVV +L+KPLTPYCRCWRS TFPLCDGSHVKH
Sbjct: 43  RRLVVVRAEG-QAINPEIRKSEEKVVDSVVVTELSKPLTPYCRCWRSGTFPLCDGSHVKH 102

Query: 89  NKATGDNVGPLLLKKQ 105
           NKATGDNVGPLLLKKQ
Sbjct: 103 NKATGDNVGPLLLKKQ 117

[Close]
BLAST of CmoCh02G010310 vs. NCBI nr
Match: gi|449451930|ref|XP_004143713.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30
Identity = 76/106 (71.70%), Postives = 83/106 (78.30%), Query Frame = 1 

Query: 3   SLPATSALPTTRPP--HGNFTVGGMPRRRMVVVVRAEGGQA---INPAIRKSEDKVVDSV 62
           S P++S   +TRP     NF   G   RR  VVVRAEGG +   INPAIRKSEDKVVDSV
Sbjct: 8   SSPSSSL--STRPHLLSRNFNDNG---RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSV 67

Query: 63  VVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 104
           +V +L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 68  LVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]
BLAST of CmoCh02G010310 vs. NCBI nr
Match: gi|659073118|ref|XP_008467263.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30
Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1 

Query: 28  RRMVVVVRAEG--GQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSH 87
           RR  VVVRAEG  G+ INPAIRKSE+KVVDSV++A+L+KPLTPYCRCWRS TFPLCDGSH
Sbjct: 31  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSH 90

Query: 88  VKHNKATGDNVGPLLLKK 104
           VKHNKATGDNVGPLLLKK
Sbjct: 91  VKHNKATGDNVGPLLLKK 108

[Close]
BLAST of CmoCh02G010310 vs. NCBI nr
Match: gi|747059806|ref|XP_011076302.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Sesamum indicum])

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-30
Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = 1 

Query: 23  GGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCD 82
           G  PRR  +VVVRAE   AINP IRK+E+KVVDSVVV DLAKPLTPYCRCWRSATFPLCD
Sbjct: 55  GSSPRR--MVVVRAE---AINPDIRKTEEKVVDSVVVTDLAKPLTPYCRCWRSATFPLCD 114

Query: 83  GSHVKHNKATGDNVGPLLLKKQ 105
           GSHVKHNKATGDNVGPLLLKKQ
Sbjct: 115 GSHVKHNKATGDNVGPLLLKKQ 131

[Close]
BLAST of CmoCh02G010310 vs. NCBI nr
Match: gi|1009122156|ref|XP_015877850.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Ziziphus jujuba])

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-30
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 1 

Query: 16  PHGNFTVG--GMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCW 75
           P  +F+ G  G  R R +VVV+AE  Q+INP IRKSEDKVVDSVVV +LAKPLT YCRCW
Sbjct: 44  PLSSFSYGMLGSRRSRSLVVVKAEA-QSINPEIRKSEDKVVDSVVVTELAKPLTAYCRCW 103

Query: 76  RSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           RS TFPLCDGSHVKHNKA+GDNVGPLLLKKQ
Sbjct: 104 RSGTFPLCDGSHVKHNKASGDNVGPLLLKKQ 133

The following BLAST results are available for this feature:
BLAST of CmoCh02G010310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NEET_ARATH1.1e-3179.49CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana GN=NEET... [more]
CISD2_DANRE2.0e-1760.32CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio GN=cisd2 PE=2 SV=1[more]
CISD2_BOVIN7.5e-1760.32CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1[more]
CISD2_HUMAN7.5e-1760.32CDGSH iron-sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1[more]
CID2B_XENLA7.5e-1760.32CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2... [more]
BLAST of CmoCh02G010310 vs. TrEMBL
Match NameE-valueIdentityDescription
W9S1F7_9ROSA8.4e-3188.16CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis GN=L484_012960... [more]
A0A0A0KL88_CUCSA1.1e-3071.70Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171700 PE=4 SV=1[more]
R0GC72_9BRAS1.2e-2979.49Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027417mg PE=4 SV=1[more]
A0A0D2SC25_GOSRA2.7e-2981.01Uncharacterized protein OS=Gossypium raimondii GN=B456_007G009100 PE=4 SV=1[more]
A0A067JHV2_JATCU2.7e-2984.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26204 PE=4 SV=1[more]
BLAST of CmoCh02G010310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51720.16.1e-3379.49 2 iron, 2 sulfur cluster binding[more]
BLAST of CmoCh02G010310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|703147526|ref|XP_010109084.1|1.2e-3088.16CDGSH iron-sulfur domain-containing protein 2A [Morus notabilis][more]
gi|449451930|ref|XP_004143713.1|1.6e-3071.70PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus][more]
gi|659073118|ref|XP_008467263.1|1.6e-3084.62PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo][more]
gi|747059806|ref|XP_011076302.1|2.0e-3085.37PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Sesamum indicum][more]
gi|1009122156|ref|XP_015877850.1|7.8e-3075.82PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018967FeS-contain_CDGSH-typ
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055072 iron ion homeostasis
biological_process GO:0010150 leaf senescence
biological_process GO:0016556 mRNA modification
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0072593 reactive oxygen species metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G010310.1CmoCh02G010310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018967Iron sulphur-containing domain, CDGSH-typePFAMPF09360zf-CDGSHcoord: 62..85
score: 9.
IPR018967Iron sulphur-containing domain, CDGSH-typeSMARTSM00704znf_cdgshcoord: 52..91
score: 2.
NoneNo IPR availablePANTHERPTHR13680FAMILY NOT NAMEDcoord: 40..104
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G010310Cucsa.115610Cucumber (Gy14) v1cgycmoB0278
CmoCh02G010310CmaCh02G010160Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G010310Cla003565Watermelon (97103) v1cmowmB569
CmoCh02G010310Csa5G171700Cucumber (Chinese Long) v2cmocuB599
CmoCh02G010310MELO3C005405Melon (DHL92) v3.5.1cmomeB520
CmoCh02G010310ClCG01G005210Watermelon (Charleston Gray)cmowcgB517
CmoCh02G010310CSPI05G08090Wild cucumber (PI 183967)cmocpiB607
CmoCh02G010310Lsi09G005510Bottle gourd (USVL1VR-Ls)cmolsiB517
CmoCh02G010310MELO3C005405.2Melon (DHL92) v3.6.1cmomedB597
CmoCh02G010310CsaV3_5G005490Cucumber (Chinese Long) v3cmocucB0719
CmoCh02G010310Cla97C01G005440Watermelon (97103) v2cmowmbB576
CmoCh02G010310CsGy5G005470Cucumber (Gy14) v2cgybcmoB614
CmoCh02G010310Carg08461Silver-seed gourdcarcmoB0971
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G010310Cucurbita moschata (Rifu)cmocmoB247
CmoCh02G010310Cucurbita moschata (Rifu)cmocmoB281
CmoCh02G010310Cucurbita moschata (Rifu)cmocmoB333
CmoCh02G010310Cucurbita moschata (Rifu)cmocmoB426
CmoCh02G010310Cucurbita maxima (Rimu)cmacmoB295
CmoCh02G010310Cucurbita maxima (Rimu)cmacmoB416
CmoCh02G010310Wild cucumber (PI 183967)cmocpiB589
CmoCh02G010310Cucumber (Chinese Long) v2cmocuB583
CmoCh02G010310Melon (DHL92) v3.5.1cmomeB567
CmoCh02G010310Watermelon (Charleston Gray)cmowcgB557
CmoCh02G010310Watermelon (97103) v1cmowmB558
CmoCh02G010310Cucurbita pepo (Zucchini)cmocpeB546
CmoCh02G010310Cucurbita pepo (Zucchini)cmocpeB552
CmoCh02G010310Cucurbita pepo (Zucchini)cmocpeB557
CmoCh02G010310Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G010310Bottle gourd (USVL1VR-Ls)cmolsiB570
CmoCh02G010310Cucumber (Gy14) v2cgybcmoB365
CmoCh02G010310Melon (DHL92) v3.6.1cmomedB649
CmoCh02G010310Silver-seed gourdcarcmoB1005
CmoCh02G010310Cucumber (Chinese Long) v3cmocucB0697
CmoCh02G010310Watermelon (97103) v2cmowmbB621
CmoCh02G010310Wax gourdcmowgoB0707
CmoCh02G010310Wax gourdcmowgoB0716