ClCG01G005210 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G005210
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	CDGSH iron-sulfur domain-containing protein 2
Location	CG_Chr01 : 5545012 .. 5546359 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGGTTCCTTTTCTTTTCTTTCTCATTATTTCCCTTTTATTCTCTTTCTCACTAAGTTAATTAGAATTAAAATGGGGGAGGAATTAGAAATTTTACTTTCTTAGATCATTTTTTTTTTCTCATTTTTTTCCTCAATTTTTTTTAGGTTTAAATGTTATTTTTGTAACAATTTTAGTTCATTTTGGTGGTTGAACTTTCAAACATTAGTCATTTAGACCTCTTAAAAATGAGGTCAAAATGAAAATGAAGAGACAAAAAAATGTCACTTTTTGAAAGTAAAGGACCAAAGTAAACATTGTTGATGCAAAATTTGGGGCTTGGAAAAGGCACCTAGCCCCCCCTTACATGACCCTCACCACGACACCAACTCTTATCTTAAGAGAACTAAATAATAGAGAATAAATCATAAGTTTTTAGATATCTTTAATGGAGGCATTATGGTATATTTACAGGGGATTTGATACCAGATTTATCTTAAATCTACTAAGATTAGGATATCAGATTTTTCAATTTCATTTTATCTTATTTTATATTATCTCATACTATTTTGATTTTTGCTTTATTTCATTAGGTTGAAATTCATTTCTCAACAAACATTTTGAAAATATAGGGACAAAAATTAATTAAAAAAAACCAAATAGGGACCAAAGTAGTATTCAAAACCTTGATTATTAATGTAATATAGGGACTAAATTAGAAAAATCTTTTTGTGCAAAAATTTACAATCCATAAAAGTAGAGCGTTTAAATTATTATTATTATTTATTTATTTATTTTTATTTTTATTTTATTTTATTTTATTTGTATATCTTATAAATGGGTCCGTTTTATATTTCTTTGGAGTACATTGAATAAATGAAATTGTTTGGGACTAAATTGGAAAACCTTAAAAAGATAAGGGAGTAAATTGAAAATTTGGTGAAAGATGTATGTTTTGAGTGCAGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

mRNA sequence

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

Coding sequence (CDS)

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

Protein sequence

MELQKAYALHTFITHYFSTSPHQHISANHCTMASIVPISAPSSLSIRTHPPHPNFNARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Homology

[Close]

BLAST of ClCG01G005210 vs. Swiss-Prot
Match: NEET_ARATH (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana GN=NEET PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.5e-30
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 1


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 107

[Close]

BLAST of ClCG01G005210 vs. Swiss-Prot
Match: CISD2_DANRE (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio GN=cisd2 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-16
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of ClCG01G005210 vs. Swiss-Prot
Match: CID2B_XENLA (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 1


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of ClCG01G005210 vs. Swiss-Prot
Match: CISD2_XENTR (CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 1


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of ClCG01G005210 vs. Swiss-Prot
Match: CID2A_XENLA (CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis GN=cisd2-a PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 1


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of ClCG01G005210 vs. TrEMBL
Match: A0A0A0KL88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171700 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-39
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 1


Query: 32  MASIVPISAPSS-LSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVD 91
           MASI+PIS+PSS LS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 92  SVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           SVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of ClCG01G005210 vs. TrEMBL
Match: W9S1F7_9ROSA (CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis GN=L484_012960 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1


Query: 48  THPPHPNF---NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRC 107
           +H P  NF   ++RR+VVVRAEG    + INP IRK+E+KVVDSV++ +LSKPLTPYCRC
Sbjct: 30  SHKPTTNFKSRSSRRLVVVRAEG----QAINPEIRKSEEKVVDSVVVTELSKPLTPYCRC 89

Query: 108 WRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           WRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 90  WRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 116

[Close]

BLAST of ClCG01G005210 vs. TrEMBL
Match: J3MKN8_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 65/89 (73.03%), Postives = 73/89 (82.02%), Query Frame = 1


Query: 48  THPPHPNFNARR-MVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWR 107
           THP      ARR +V VRAE G GG  INP+IRK E+KVVD+VL  +LSKPLTPYCRCWR
Sbjct: 13  THPSPGRVRARRGLVAVRAEAGVGG--INPSIRKEEEKVVDTVLAGELSKPLTPYCRCWR 72

Query: 108 SATFPICDGSHVKHNKATGDNVGPLLLKK 136
           S TFP+CDGSH+KHNKATGDNVGPLL+KK
Sbjct: 73  SGTFPLCDGSHLKHNKATGDNVGPLLVKK 99

[Close]

BLAST of ClCG01G005210 vs. TrEMBL
Match: D7MR33_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495239 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-28
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RMVVVRAEGG GG  INP IRK E+KVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMVVVRAEGGGGG--INPEIRKNEEKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 108

[Close]

BLAST of ClCG01G005210 vs. TrEMBL
Match: A0A0E0AJF2_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-28
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 1


Query: 30  CTMASIVPISAPSSLSIRTHPPHPNFNARR--MVVVRAEGGSGGEPINPAIRKTEDKVVD 89
           C  A  +P+S P++   R         ARR  +V VRAE G GG  INP+IRK E+KVVD
Sbjct: 6   CAAACRLPVSPPAAAPGR---------ARRGLVVAVRAEAGVGG--INPSIRKEEEKVVD 65

Query: 90  SVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           +VL  +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLL+KK
Sbjct: 66  TVLAGELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLVKK 102

[Close]

BLAST of ClCG01G005210 vs. TAIR10
Match: AT5G51720.1 (AT5G51720.1 2 iron, 2 sulfur cluster binding)

HSP 1 Score: 132.1 bits (331), Expect = 2.6e-31
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 1


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 107

[Close]

BLAST of ClCG01G005210 vs. NCBI nr
Match: gi|449451930|ref|XP_004143713.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 9.1e-39
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 1


Query: 32  MASIVPISAPSS-LSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVD 91
           MASI+PIS+PSS LS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 92  SVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           SVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of ClCG01G005210 vs. NCBI nr
Match: gi|659073118|ref|XP_008467263.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo])

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 1


Query: 32  MASIVPISAPSS-LSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MASIV IS+PSS LS R     P +FN    RR VVVRAEG SG E INPAIRK+E+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSG-EHINPAIRKSEEKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of ClCG01G005210 vs. NCBI nr
Match: gi|747059806|ref|XP_011076302.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Sesamum indicum])

HSP 1 Score: 138.7 bits (348), Expect = 7.7e-30
Identity = 75/128 (58.59%), Postives = 90/128 (70.31%), Query Frame = 1


Query: 8   ALHTFITHYFSTSPHQHISANHCTMASIVPISAPSSLSIRTHPPHPNFNARRMVVVRAEG 67
           +L T   H  +T    H +    TMA++  ++A S+L +      P  + RRMVVVRAE 
Sbjct: 12  SLPTKSAHLPTTCTPSHPTTQEQTMAALSCVNA-SALGLAYR--RPGSSPRRMVVVRAEA 71

Query: 68  GSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDN 127
                 INP IRKTE+KVVDSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGDN
Sbjct: 72  ------INPDIRKTEEKVVDSVVVTDLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDN 130

Query: 128 VGPLLLKK 136
           VGPLLLKK
Sbjct: 132 VGPLLLKK 130

[Close]

BLAST of ClCG01G005210 vs. NCBI nr
Match: gi|703147526|ref|XP_010109084.1| (CDGSH iron-sulfur domain-containing protein 2A [Morus notabilis])

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1


Query: 48  THPPHPNF---NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRC 107
           +H P  NF   ++RR+VVVRAEG    + INP IRK+E+KVVDSV++ +LSKPLTPYCRC
Sbjct: 30  SHKPTTNFKSRSSRRLVVVRAEG----QAINPEIRKSEEKVVDSVVVTELSKPLTPYCRC 89

Query: 108 WRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           WRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 90  WRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 116

[Close]

BLAST of ClCG01G005210 vs. NCBI nr
Match: gi|727537372|ref|XP_010442677.1| (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Camelina sativa])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 61/78 (78.21%), Postives = 68/78 (87.18%), Query Frame = 1


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RM VVRAEGG GG  INP IRK E+KVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMAVVRAEGGGGGGGINPEIRKNEEKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 110

The following BLAST results are available for this feature:

BLAST of ClCG01G005210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NEET_ARATH	4.5e-30	79.49	CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana GN=NEET...	[more]
CISD2_DANRE	2.2e-16	61.29	CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio GN=cisd2 PE=2 SV=1	[more]
CID2B_XENLA	4.9e-16	61.29	CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis GN=cisd2-b PE=2...	[more]
CISD2_XENTR	4.9e-16	61.29	CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=...	[more]
CID2A_XENLA	4.9e-16	61.29	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis GN=cisd2-a PE=2...	[more]

BLAST of ClCG01G005210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL88_CUCSA	6.4e-39	79.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171700 PE=4 SV=1	[more]
W9S1F7_9ROSA	1.2e-29	72.53	CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis GN=L484_012960...	[more]
J3MKN8_ORYBR	1.3e-28	73.03	Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1	[more]
D7MR33_ARALL	2.3e-28	79.49	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A0E0AJF2_9ORYZ	3.0e-28	63.89	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]

BLAST of ClCG01G005210 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51720.1	2.6e-31	79.49	2 iron, 2 sulfur cluster binding	[more]

BLAST of ClCG01G005210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451930\|ref\|XP_004143713.1\|	9.1e-39	79.63	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus]	[more]
gi\|659073118\|ref\|XP_008467263.1\|	2.0e-33	77.06	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo]	[more]
gi\|747059806\|ref\|XP_011076302.1\|	7.7e-30	58.59	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Sesamum indicum]	[more]
gi\|703147526\|ref\|XP_010109084.1\|	1.7e-29	72.53	CDGSH iron-sulfur domain-containing protein 2A [Morus notabilis]	[more]
gi\|727537372\|ref\|XP_010442677.1\|	8.6e-29	78.21	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018967	FeS-contain_CDGSH-typ

Vocabulary: **Molecular Function**
Term	Definition
GO:0051537	2 iron, 2 sulfur cluster binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0043231	intracellular membrane-bounded organelle

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0044699	single-organism process
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0010150	leaf senescence
biological_process	GO:0016556	mRNA modification
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G005210.1	ClCG01G005210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018967	Iron sulphur-containing domain, CDGSH-type	PFAM	PF09360	zf-CDGSH	coord: 99..117 score: 5.
IPR018967	Iron sulphur-containing domain, CDGSH-type	SMART	SM00704	znf_cdgsh	coord: 84..123 score: 2.
None	No IPR available	PANTHER	PTHR13680	FAMILY NOT NAMED	coord: 74..135 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G005210	Csa5G171700	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G005210	MELO3C005405	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G005210	Cla003565	Watermelon (97103) v1	wcgwmB154
ClCG01G005210	Cla97C01G005440	Watermelon (97103) v2	wcgwmbB089
ClCG01G005210	CSPI05G08090	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G005210	Cucsa.115610	Cucumber (Gy14) v1	cgywcgB170
ClCG01G005210	CmaCh02G010160	Cucurbita maxima (Rimu)	cmawcgB519
ClCG01G005210	CmoCh02G010310	Cucurbita moschata (Rifu)	cmowcgB517
ClCG01G005210	Lsi09G005510	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G005210	CsGy5G005470	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G005210	MELO3C005405.2	Melon (DHL92) v3.6.1	medwcgB017
ClCG01G005210	Carg08461	Silver-seed gourd	carwcgB0688
ClCG01G005210	CsaV3_5G005490	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G005210	Cucurbita pepo (Zucchini)	cpewcgB168
ClCG01G005210	Cucurbita pepo (Zucchini)	cpewcgB640
ClCG01G005210	Bottle gourd (USVL1VR-Ls)	lsiwcgB328
ClCG01G005210	Silver-seed gourd	carwcgB0716
ClCG01G005210	Cucumber (Gy14) v1	cgywcgB447
ClCG01G005210	Cucurbita maxima (Rimu)	cmawcgB256
ClCG01G005210	Cucurbita moschata (Rifu)	cmowcgB244