CmoCh01G017970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	17.6 kDa class II heat shock protein
Location	Cmo_Chr01 : 13240619 .. 13241032 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Homology

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BLAST of CmoCh01G017970 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-58
Identity = 112/137 (81.75%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MDLVDEA-DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVED 60
           MDL D+  +K+ NAPTRTYVRDAKAMAATPAD+KE+PNSYVF+VDMPG+K GDIKVQVED
Sbjct: 15  MDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVED 74

Query: 61  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ 120
           +NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPENAN++AISA+ QDGVLTVTV 
Sbjct: 75  ENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVN 134

Query: 121 KLPPPEPKKPKVVEVKV 137
           KLPPPEPKKPK ++VKV
Sbjct: 135 KLPPPEPKKPKTIQVKV 151

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BLAST of CmoCh01G017970 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-58
Identity = 113/129 (87.60%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 8   DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISG 67
           + S NAP++ YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVE+DNVLLISG
Sbjct: 26  EDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISG 85

Query: 68  ERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPK 127
           ERKREEEKEGAK++RMERRVGK MRKF LPENAN DAISAVCQDGVLTVTVQKLPPPEPK
Sbjct: 86  ERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPK 145

Query: 128 KPKVVEVKV 137
           KPK +EVKV
Sbjct: 146 KPKTIEVKV 154

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BLAST of CmoCh01G017970 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.0e-57
Identity = 112/139 (80.58%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MDLVDEA---DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQV 60
           MD+ ++    +K+ NAPT +YVRDAKAMAATPAD+KEYPNSYVF +DMPGLK GDIKVQV
Sbjct: 20  MDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQV 79

Query: 61  EDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVT 120
           EDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLPENAN DAISAVCQDGVL+VT
Sbjct: 80  EDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139

Query: 121 VQKLPPPEPKKPKVVEVKV 137
           VQKLPPPEPKKP+ ++VKV
Sbjct: 140 VQKLPPPEPKKPRTIQVKV 158

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BLAST of CmoCh01G017970 vs. Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-53
Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 1


Query: 5   DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLL 64
           D+   + +AP+RT++ DAKAMAATPAD+KEYPNSYVF++DMPGLK GDIKVQV+ DNVL 
Sbjct: 22  DDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLS 81

Query: 65  ISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP 124
           ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPENAN + I+AVCQDGVLTVTV+ +PP
Sbjct: 82  ISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPP 141

Query: 125 PEPKKPKVVEVKV 137
           PEPKKP+ +EVK+
Sbjct: 142 PEPKKPRTIEVKI 154

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BLAST of CmoCh01G017970 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 101/130 (77.69%), Postives = 117/130 (90.00%), Query Frame = 1


Query: 8   DKSFNA-PTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLIS 67
           +KS N+ P+R YVRDA+AMAATPAD+KE PNSYVF+VDMPGLK GDIKVQVE DNVL+IS
Sbjct: 30  NKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVIS 89

Query: 68  GERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEP 127
           G+R REEEKEG KYVRMERR+GK M+KF LPE+AN D ISA+CQDGVLTVTV+KLPPPEP
Sbjct: 90  GKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEP 149

Query: 128 KKPKVVEVKV 137
           KKPK ++V+V
Sbjct: 150 KKPKTIQVQV 159

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BLAST of CmoCh01G017970 vs. TrEMBL
Match: H6TB44_CITLA (HSP17.4 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.3e-67
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDD
Sbjct: 20  MDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPPEPKKPK+VEVKVN
Sbjct: 140 LPPPEPKKPKIVEVKVN 156

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BLAST of CmoCh01G017970 vs. TrEMBL
Match: A0A0A0L061_CUCSA (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-64
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 20  MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 140 LPPPQPKKPKIVEVKVN 156

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BLAST of CmoCh01G017970 vs. TrEMBL
Match: M5XMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.4e-63
Identity = 123/136 (90.44%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  DE DKSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 85  MDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 144

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTV+K
Sbjct: 145 NVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVEK 204

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 205 LPPPEPKKPKTIEVKI 220

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BLAST of CmoCh01G017970 vs. TrEMBL
Match: C9EIM5_9ROSA (CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  +E DKSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

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BLAST of CmoCh01G017970 vs. TrEMBL
Match: D5JG84_JATCU (Heat shock protein 17.5 cytosolic class II OS=Jatropha curcas GN=JCGZ_07627 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-62
Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 1


Query: 1   MDLVDEAD-KSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVED 60
           MD+ D+AD KSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVF++DMPGLK GDIKVQVED
Sbjct: 20  MDIGDDADHKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFIIDMPGLKSGDIKVQVED 79

Query: 61  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ 120
           DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKF LPENAN DAISAVCQDGVLTVTVQ
Sbjct: 80  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFALPENANTDAISAVCQDGVLTVTVQ 139

Query: 121 KLPPPEPKKPKVVEVKV 137
           KLPPPEPKKPK +EVK+
Sbjct: 140 KLPPPEPKKPKTIEVKI 156

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BLAST of CmoCh01G017970 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-48
Identity = 94/130 (72.31%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 8   DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISG 67
           +K+ N P+R Y+RDAKAMAATPAD+ E+PN+Y FVVDMPG+K  +IKVQVE+DNVL++SG
Sbjct: 25  EKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSG 84

Query: 68  ERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEP 127
           ER+RE +E EG KYVRMERR+GK MRKF LPENA++D ISAVC DGVL VTVQKLPPPEP
Sbjct: 85  ERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEP 144

Query: 128 KKPKVVEVKV 137
           KKPK ++V+V
Sbjct: 145 KKPKTIQVQV 154

[Close]

BLAST of CmoCh01G017970 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 173.7 bits (439), Expect = 7.8e-44
Identity = 82/133 (61.65%), Postives = 114/133 (85.71%), Query Frame = 1


Query: 5   DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLL 64
           ++ +K+ N P+R Y+RDAKAMAATPAD+ E+P++YVF VDMPG+K  +I+VQ+E++NVL+
Sbjct: 23  EQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLV 82

Query: 65  ISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP 124
           +SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+++ ISA C DGVL VT+ KLPP
Sbjct: 83  VSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPP 142

Query: 125 PEPKKPKVVEVKV 137
           PEPKKPK ++V+V
Sbjct: 143 PEPKKPKTIQVQV 155

[Close]

BLAST of CmoCh01G017970 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 104.0 bits (258), Expect = 7.6e-23
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1


Query: 20  RDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAK 79
           RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 80  YVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 138
           + R+ER  GK MR+F LPENA ++ + A  ++GVLTV V K P    KKP+V  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

[Close]

BLAST of CmoCh01G017970 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-22
Identity = 54/114 (47.37%), Postives = 86/114 (75.44%), Query Frame = 1


Query: 29  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKRE--EEKEGAKYVRME 88
           P DI E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR+  E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 89  RRVGK-LMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 138
           RR+ + L++KF LPE+A++ +++A  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of CmoCh01G017970 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21
Identity = 47/111 (42.34%), Postives = 78/111 (70.27%), Query Frame = 1


Query: 24  AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRM 83
           A++    D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREEEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 84  ERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEV 135
           ER  GK  R+F LP+N +++++ A  ++GVLT+ + KL P + K P+VV +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

[Close]

BLAST of CmoCh01G017970 vs. NCBI nr
Match: gi|315932722|gb|ADU55791.1| (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-66
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDD
Sbjct: 20  MDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPPEPKKPK+VEVKVN
Sbjct: 140 LPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmoCh01G017970 vs. NCBI nr
Match: gi|449447155|ref|XP_004141334.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 6.4e-64
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 20  MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 140 LPPPQPKKPKIVEVKVN 156

[Close]

BLAST of CmoCh01G017970 vs. NCBI nr
Match: gi|657964030|ref|XP_008373637.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica])

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-63
Identity = 124/136 (91.18%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD+ D+A+KSFNAPTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDVADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEG KYVRMERRVGK MRKFVLPENANVDAISAVCQDGVLTVTV+K
Sbjct: 80  NVLLISGERKREEEKEGVKYVRMERRVGKFMRKFVLPENANVDAISAVCQDGVLTVTVEK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

[Close]

BLAST of CmoCh01G017970 vs. NCBI nr
Match: gi|659103975|ref|XP_008452767.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-63
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 105 MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 164

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN+DAISAVCQDGVLTVTVQK
Sbjct: 165 NVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENANIDAISAVCQDGVLTVTVQK 224

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 225 LPPPQPKKPKIVEVKVN 240

[Close]

BLAST of CmoCh01G017970 vs. NCBI nr
Match: gi|694312464|ref|XP_009362384.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri])

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-62
Identity = 123/136 (90.44%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  D+A+KSFNAPTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDAADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NV+LISGERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTV+K
Sbjct: 80  NVILISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVNAISAVCQDGVLTVTVEK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

The following BLAST results are available for this feature:

BLAST of CmoCh01G017970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP21_PEA	1.8e-58	81.75	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_SOLPE	2.3e-58	87.60	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_SOYBN	2.0e-57	80.58	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP21_IPONI	8.6e-53	77.44	17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1	[more]
HSP21_HELAN	2.8e-51	77.69	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]

BLAST of CmoCh01G017970 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB44_CITLA	7.3e-67	96.35	HSP17.4 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0L061_CUCSA	4.4e-64	92.70	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN...	[more]
M5XMI8_PRUPE	8.4e-63	90.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1	[more]
C9EIM5_9ROSA	1.1e-62	91.18	CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1	[more]
D5JG84_JATCU	5.4e-62	89.78	Heat shock protein 17.5 cytosolic class II OS=Jatropha curcas GN=JCGZ_07627 PE=2...	[more]

BLAST of CmoCh01G017970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	2.3e-48	72.31	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	7.8e-44	61.65	heat shock protein 17.6A	[more]
AT5G59720.1	7.6e-23	47.46	heat shock protein 18.2	[more]
AT1G54050.1	4.9e-22	47.37	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	4.1e-21	42.34	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh01G017970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932722\|gb\|ADU55791.1\|	1.0e-66	96.35	HSP17.4 [Citrullus lanatus]	[more]
gi\|449447155\|ref\|XP_004141334.1\|	6.4e-64	92.70	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus]	[more]
gi\|657964030\|ref\|XP_008373637.1\|	3.2e-63	91.18	PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica]	[more]
gi\|659103975\|ref\|XP_008452767.1\|	4.1e-63	92.70	PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|694312464\|ref\|XP_009362384.1\|	1.2e-62	90.44	PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017970.1	CmoCh01G017970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 31..134 score: 1.9
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 31..120 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 2..136 score: 9.0
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 8..131 score: 1.99
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 5..136 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017970	Cucsa.299660	Cucumber (Gy14) v1	cgycmoB0821
CmoCh01G017970	CmaCh09G003550	Cucurbita maxima (Rimu)	cmacmoB042
CmoCh01G017970	CmaCh01G017130	Cucurbita maxima (Rimu)	cmacmoB470
CmoCh01G017970	Cla020854	Watermelon (97103) v1	cmowmB429
CmoCh01G017970	Csa4G646340	Cucumber (Chinese Long) v2	cmocuB453
CmoCh01G017970	MELO3C016898	Melon (DHL92) v3.5.1	cmomeB435
CmoCh01G017970	ClCG05G018130	Watermelon (Charleston Gray)	cmowcgB408
CmoCh01G017970	CSPI04G25580	Wild cucumber (PI 183967)	cmocpiB457
CmoCh01G017970	Lsi04G014020	Bottle gourd (USVL1VR-Ls)	cmolsiB422
CmoCh01G017970	Cp4.1LG02g05840	Cucurbita pepo (Zucchini)	cmocpeB445
CmoCh01G017970	Cp4.1LG06g02530	Cucurbita pepo (Zucchini)	cmocpeB462
CmoCh01G017970	MELO3C016898.2	Melon (DHL92) v3.6.1	cmomedB499
CmoCh01G017970	CsaV3_4G035900	Cucumber (Chinese Long) v3	cmocucB0541
CmoCh01G017970	Cla97C05G099440	Watermelon (97103) v2	cmowmbB456
CmoCh01G017970	Bhi09G002546	Wax gourd	cmowgoB0617
CmoCh01G017970	CsGy4G023890	Cucumber (Gy14) v2	cgybcmoB475
CmoCh01G017970	Carg10706	Silver-seed gourd	carcmoB1043
CmoCh01G017970	Carg02783	Silver-seed gourd	carcmoB0872
CmoCh01G017970	Carg16357	Silver-seed gourd	carcmoB0614

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G017970	CmoCh09G003550	Cucurbita moschata (Rifu)	cmocmoB014

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017970	Cucurbita moschata (Rifu)	cmocmoB067
CmoCh01G017970	Cucurbita maxima (Rimu)	cmacmoB469
CmoCh01G017970	Cucurbita pepo (Zucchini)	cmocpeB465
CmoCh01G017970	Bottle gourd (USVL1VR-Ls)	cmolsiB412
CmoCh01G017970	Cucumber (Gy14) v2	cgybcmoB103
CmoCh01G017970	Cucumber (Gy14) v2	cgybcmoB926
CmoCh01G017970	Melon (DHL92) v3.6.1	cmomedB455
CmoCh01G017970	Silver-seed gourd	carcmoB0133
CmoCh01G017970	Wax gourd	cmowgoB0629