CmoCh01G017970.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017970.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	17.6 kDa class II heat shock protein
Location	Cmo_Chr01 : 13240619 .. 13241032 (-)
Sequence length	414

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAGGATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Homology

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BLAST of CmoCh01G017970.1 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-58
Identity = 112/137 (81.75%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MDLVDEA-DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVED 60
           MDL D+  +K+ NAPTRTYVRDAKAMAATPAD+KE+PNSYVF+VDMPG+K GDIKVQVED
Sbjct: 15  MDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVED 74

Query: 61  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ 120
           +NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPENAN++AISA+ QDGVLTVTV 
Sbjct: 75  ENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVN 134

Query: 121 KLPPPEPKKPKVVEVKV 137
           KLPPPEPKKPK ++VKV
Sbjct: 135 KLPPPEPKKPKTIQVKV 151

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BLAST of CmoCh01G017970.1 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-58
Identity = 113/129 (87.60%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 8   DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISG 67
           + S NAP++ YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVE+DNVLLISG
Sbjct: 26  EDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISG 85

Query: 68  ERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPK 127
           ERKREEEKEGAK++RMERRVGK MRKF LPENAN DAISAVCQDGVLTVTVQKLPPPEPK
Sbjct: 86  ERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPK 145

Query: 128 KPKVVEVKV 137
           KPK +EVKV
Sbjct: 146 KPKTIEVKV 154

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BLAST of CmoCh01G017970.1 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.0e-57
Identity = 112/139 (80.58%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MDLVDEA---DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQV 60
           MD+ ++    +K+ NAPT +YVRDAKAMAATPAD+KEYPNSYVF +DMPGLK GDIKVQV
Sbjct: 20  MDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQV 79

Query: 61  EDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVT 120
           EDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLPENAN DAISAVCQDGVL+VT
Sbjct: 80  EDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139

Query: 121 VQKLPPPEPKKPKVVEVKV 137
           VQKLPPPEPKKP+ ++VKV
Sbjct: 140 VQKLPPPEPKKPRTIQVKV 158

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BLAST of CmoCh01G017970.1 vs. Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-53
Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 1


Query: 5   DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLL 64
           D+   + +AP+RT++ DAKAMAATPAD+KEYPNSYVF++DMPGLK GDIKVQV+ DNVL 
Sbjct: 22  DDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLS 81

Query: 65  ISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP 124
           ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPENAN + I+AVCQDGVLTVTV+ +PP
Sbjct: 82  ISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPP 141

Query: 125 PEPKKPKVVEVKV 137
           PEPKKP+ +EVK+
Sbjct: 142 PEPKKPRTIEVKI 154

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BLAST of CmoCh01G017970.1 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51
Identity = 101/130 (77.69%), Postives = 117/130 (90.00%), Query Frame = 1


Query: 8   DKSFNA-PTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLIS 67
           +KS N+ P+R YVRDA+AMAATPAD+KE PNSYVF+VDMPGLK GDIKVQVE DNVL+IS
Sbjct: 30  NKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVIS 89

Query: 68  GERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEP 127
           G+R REEEKEG KYVRMERR+GK M+KF LPE+AN D ISA+CQDGVLTVTV+KLPPPEP
Sbjct: 90  GKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEP 149

Query: 128 KKPKVVEVKV 137
           KKPK ++V+V
Sbjct: 150 KKPKTIQVQV 159

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BLAST of CmoCh01G017970.1 vs. TrEMBL
Match: H6TB44_CITLA (HSP17.4 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.3e-67
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDD
Sbjct: 20  MDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPPEPKKPK+VEVKVN
Sbjct: 140 LPPPEPKKPKIVEVKVN 156

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BLAST of CmoCh01G017970.1 vs. TrEMBL
Match: A0A0A0L061_CUCSA (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-64
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 20  MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 140 LPPPQPKKPKIVEVKVN 156

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BLAST of CmoCh01G017970.1 vs. TrEMBL
Match: M5XMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.4e-63
Identity = 123/136 (90.44%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  DE DKSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 85  MDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 144

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLI+GERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTV+K
Sbjct: 145 NVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVEK 204

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 205 LPPPEPKKPKTIEVKI 220

[Close]

BLAST of CmoCh01G017970.1 vs. TrEMBL
Match: C9EIM5_9ROSA (CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  +E DKSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

[Close]

BLAST of CmoCh01G017970.1 vs. TrEMBL
Match: D5JG84_JATCU (Heat shock protein 17.5 cytosolic class II OS=Jatropha curcas GN=JCGZ_07627 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-62
Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 1


Query: 1   MDLVDEAD-KSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVED 60
           MD+ D+AD KSFNAPTRTYVRDAKAMA+TPAD+KEYPNSYVF++DMPGLK GDIKVQVED
Sbjct: 20  MDIGDDADHKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFIIDMPGLKSGDIKVQVED 79

Query: 61  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ 120
           DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKF LPENAN DAISAVCQDGVLTVTVQ
Sbjct: 80  DNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFALPENANTDAISAVCQDGVLTVTVQ 139

Query: 121 KLPPPEPKKPKVVEVKV 137
           KLPPPEPKKPK +EVK+
Sbjct: 140 KLPPPEPKKPKTIEVKI 156

[Close]

BLAST of CmoCh01G017970.1 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-48
Identity = 94/130 (72.31%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 8   DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISG 67
           +K+ N P+R Y+RDAKAMAATPAD+ E+PN+Y FVVDMPG+K  +IKVQVE+DNVL++SG
Sbjct: 25  EKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSG 84

Query: 68  ERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEP 127
           ER+RE +E EG KYVRMERR+GK MRKF LPENA++D ISAVC DGVL VTVQKLPPPEP
Sbjct: 85  ERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEP 144

Query: 128 KKPKVVEVKV 137
           KKPK ++V+V
Sbjct: 145 KKPKTIQVQV 154

[Close]

BLAST of CmoCh01G017970.1 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 173.7 bits (439), Expect = 7.8e-44
Identity = 82/133 (61.65%), Postives = 114/133 (85.71%), Query Frame = 1


Query: 5   DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLL 64
           ++ +K+ N P+R Y+RDAKAMAATPAD+ E+P++YVF VDMPG+K  +I+VQ+E++NVL+
Sbjct: 23  EQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLV 82

Query: 65  ISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP 124
           +SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+++ ISA C DGVL VT+ KLPP
Sbjct: 83  VSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPP 142

Query: 125 PEPKKPKVVEVKV 137
           PEPKKPK ++V+V
Sbjct: 143 PEPKKPKTIQVQV 155

[Close]

BLAST of CmoCh01G017970.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 104.0 bits (258), Expect = 7.6e-23
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1


Query: 20  RDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAK 79
           RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 80  YVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 138
           + R+ER  GK MR+F LPENA ++ + A  ++GVLTV V K P    KKP+V  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

[Close]

BLAST of CmoCh01G017970.1 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-22
Identity = 54/114 (47.37%), Postives = 86/114 (75.44%), Query Frame = 1


Query: 29  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKRE--EEKEGAKYVRME 88
           P DI E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR+  E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 89  RRVGK-LMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 138
           RR+ + L++KF LPE+A++ +++A  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of CmoCh01G017970.1 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21
Identity = 47/111 (42.34%), Postives = 78/111 (70.27%), Query Frame = 1


Query: 24  AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRM 83
           A++    D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREEEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 84  ERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEV 135
           ER  GK  R+F LP+N +++++ A  ++GVLT+ + KL P + K P+VV +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

[Close]

BLAST of CmoCh01G017970.1 vs. NCBI nr
Match: gi|315932722|gb|ADU55791.1| (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-66
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDD
Sbjct: 20  MDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPPEPKKPK+VEVKVN
Sbjct: 140 LPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmoCh01G017970.1 vs. NCBI nr
Match: gi|449447155|ref|XP_004141334.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 6.4e-64
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 20  MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN DAISAVCQDGVLTVTVQK
Sbjct: 80  NVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQK 139

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 140 LPPPQPKKPKIVEVKVN 156

[Close]

BLAST of CmoCh01G017970.1 vs. NCBI nr
Match: gi|657964030|ref|XP_008373637.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica])

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-63
Identity = 124/136 (91.18%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD+ D+A+KSFNAPTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDVADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKEG KYVRMERRVGK MRKFVLPENANVDAISAVCQDGVLTVTV+K
Sbjct: 80  NVLLISGERKREEEKEGVKYVRMERRVGKFMRKFVLPENANVDAISAVCQDGVLTVTVEK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

[Close]

BLAST of CmoCh01G017970.1 vs. NCBI nr
Match: gi|659103975|ref|XP_008452767.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-63
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDI+VQVEDD
Sbjct: 105 MDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDD 164

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN+DAISAVCQDGVLTVTVQK
Sbjct: 165 NVLLISGERKREEEKE-AKYVRMERRVGKLMRKFVLPENANIDAISAVCQDGVLTVTVQK 224

Query: 121 LPPPEPKKPKVVEVKVN 138
           LPPP+PKKPK+VEVKVN
Sbjct: 225 LPPPQPKKPKIVEVKVN 240

[Close]

BLAST of CmoCh01G017970.1 vs. NCBI nr
Match: gi|694312464|ref|XP_009362384.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri])

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-62
Identity = 123/136 (90.44%), Postives = 131/136 (96.32%), Query Frame = 1


Query: 1   MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDD 60
           MD  D+A+KSFNAPTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVEDD
Sbjct: 20  MDAADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDD 79

Query: 61  NVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQK 120
           NV+LISGERKREEEKEGAKYVRMERRVGK MRKFVLPENANV+AISAVCQDGVLTVTV+K
Sbjct: 80  NVILISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVNAISAVCQDGVLTVTVEK 139

Query: 121 LPPPEPKKPKVVEVKV 137
           LPPPEPKKPK +EVK+
Sbjct: 140 LPPPEPKKPKTIEVKI 155

The following BLAST results are available for this feature:

BLAST of CmoCh01G017970.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP21_PEA	1.8e-58	81.75	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_SOLPE	2.3e-58	87.60	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_SOYBN	2.0e-57	80.58	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP21_IPONI	8.6e-53	77.44	17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1	[more]
HSP21_HELAN	2.8e-51	77.69	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]

BLAST of CmoCh01G017970.1 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB44_CITLA	7.3e-67	96.35	HSP17.4 OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0L061_CUCSA	4.4e-64	92.70	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN...	[more]
M5XMI8_PRUPE	8.4e-63	90.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1	[more]
C9EIM5_9ROSA	1.1e-62	91.18	CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1	[more]
D5JG84_JATCU	5.4e-62	89.78	Heat shock protein 17.5 cytosolic class II OS=Jatropha curcas GN=JCGZ_07627 PE=2...	[more]

BLAST of CmoCh01G017970.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	2.3e-48	72.31	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	7.8e-44	61.65	heat shock protein 17.6A	[more]
AT5G59720.1	7.6e-23	47.46	heat shock protein 18.2	[more]
AT1G54050.1	4.9e-22	47.37	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	4.1e-21	42.34	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh01G017970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932722\|gb\|ADU55791.1\|	1.0e-66	96.35	HSP17.4 [Citrullus lanatus]	[more]
gi\|449447155\|ref\|XP_004141334.1\|	6.4e-64	92.70	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus]	[more]
gi\|657964030\|ref\|XP_008373637.1\|	3.2e-63	91.18	PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica]	[more]
gi\|659103975\|ref\|XP_008452767.1\|	4.1e-63	92.70	PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|694312464\|ref\|XP_009362384.1\|	1.2e-62	90.44	PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G017970	CmoCh01G017970	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017970.1	CmoCh01G017970.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017970.1.CDS.1	CmoCh01G017970.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G017970.1.exon.1	CmoCh01G017970.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 31..134 score: 1.9
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 31..120 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 2..136 score: 9.0
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 8..131 score: 1.99
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 5..136 score: 8.8