Carg16357 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16357
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heat-shock protein
Location	Cucurbita_argyrosperma_scaffold_088 : 463880 .. 465572 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCGTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTATGGGGCTACCACGACGCATGGTTTGCATCTTTCTCCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGTAACTTAATATAGACGGAGTAGGTTAGGAATCACGATCCTATACAATATATCAACTCTTTAATTAGTCAAGGTGAGATTCATTCTCTAATTTTTTAACCATAGGATTCACTCTAATAATCTTCTTTTCAAAGAATGGTAAGATCTTTGAAACGCAAGGAAGAGTTGATTCGTGCGAAATTACCTGTTTTTATCTATCCGACCCATTTCGTACCCCTAATCTATGGGTACTTTGGACCGTTTTCTCTTAATTGAGTCGCTCTCAAGTAAAGTACACTTTGCTTTTAGTGTCCTTGAGTAGTCACTTCTTAATCGATGCTCGGTTCTTTGGTTTTCTTTTCTTGAGTTCTCGAATTACTTATTTTGTAGTGGCAATCTCTGAATTACCTGGATCTCGAGCCATGTGGTGTTCCAACTAGTTTCAAAAATGTACTTTAGTGTCTTTGAATAGTCTCTTCTTAATTGCTGTTCGGTTCTTTGGTTTTTTTTTTCTTGAGCTCTCAAACTACTTATTTTGGAGTGGCAACCCCTGAATTACCTGAATCTCTATGTGGTGTTCCAACCCAGTTTAAAAAAAAAATTACTTATTTTGGAGTGGCAACCCCTGAATCTCGAGCTATGTGGTGTTCCAACCTAGTTTCAAAAATGAACTTTTTGGATCGTGAAAGCGGGATTTCTTGACATTGTATATTAAAATTCATTAAAGCACGATTTGCATAAATGAAGCTCCAATAGAAAAATAGTGGAAAGAAAAAATAATTATACCTTTTTGTTCAATAAAATTGCACCTTTTCGTTCGAGAATTGAATTTAATATTCTCGGTTTTGAACATAAGCTCTTGTGATTCTTAATCGTTATTATTTCGGTGGGTGTCACAGGCGGGTTTTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGGTCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTCAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGTAATTTCTATGAGAATAATAAATTTTGGAATATATATATGCGCTATTTAAAATTGTTTTATTTAACTTAAAATTAATGTGCTCTTTTTTTTAATAACAATTTCTAGATAAAGATCATATATA

mRNA sequence

AAAGCGTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTATGGGGCTACCACGACGCATGGTTTGCATCTTTCTCCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGCGGGTTTTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGGTCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTCAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGTAATTTCTATGAGAATAATAAATTTTGGAATATATATATGCGCTATTTAAAATTGTTTTATTTAACTTAAAATTAATGTGCTCTTTTTTTTAATAACAATTTCTAGATAAAGATCATATATA

Coding sequence (CDS)

ATGAGTATGGGGCTACCACGACGCATGGTTTGCATCTTTCTCCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGCGGGTTTTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGGTCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTCAAGTCTAA

Protein sequence

MSMGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEEGSMSGGEDLKASRAQV

Homology

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BLAST of Carg16357 vs. NCBI nr
Match: XP_022952788.1 (22.0 kDa heat shock protein-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 4.3e-105
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MSMGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ 60
           MSMGLPR MVC+FLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ
Sbjct: 1   MSMGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ 60

Query: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120
           SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE
Sbjct: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120

Query: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180
           SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV
Sbjct: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180

Query: 181 VKIEEGSMSGGEDLKASRAQV 202
           VKIEEGSMSGGED+K SRA V
Sbjct: 181 VKIEEGSMSGGEDVKPSRADV 201

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BLAST of Carg16357 vs. NCBI nr
Match: XP_023553856.1 (22.0 kDa heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 3.4e-102
Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MSMGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ 60
           MSMGLPR MVC FLPLAVLLFVTHQHAAHALMPYRS+WDIMQPAIMQGGFSEDPFRILEQ
Sbjct: 3   MSMGLPRTMVCTFLPLAVLLFVTHQHAAHALMPYRSVWDIMQPAIMQGGFSEDPFRILEQ 62

Query: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120
           SPLGVPRSAVDTV+IARTDWKETSGEHMIWMDIPGVKKEDLKIEVEE SVLRISGEMKGE
Sbjct: 63  SPLGVPRSAVDTVSIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEEKSVLRISGEMKGE 122

Query: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180
           SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE KKEAKV
Sbjct: 123 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKV 182

Query: 181 VKIEEGSMSGGEDLKASRAQV 202
           VKIEEGSMSGGEDLK SRA V
Sbjct: 183 VKIEEGSMSGGEDLKPSRADV 202

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BLAST of Carg16357 vs. NCBI nr
Match: XP_022952789.1 (22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 377.5 bits (968), Expect = 2.9e-101
Identity = 192/201 (95.52%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MSMGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ 60
           MSMGLPR MVC+FLPLAVLLFVTHQHAAHALMPYRSIWDIMQP    GGFSEDPFRILEQ
Sbjct: 1   MSMGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQP----GGFSEDPFRILEQ 60

Query: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120
           SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE
Sbjct: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120

Query: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180
           SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV
Sbjct: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180

Query: 181 VKIEEGSMSGGEDLKASRAQV 202
           VKIEEGSMSGGED+K SRA V
Sbjct: 181 VKIEEGSMSGGEDVKPSRADV 197

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BLAST of Carg16357 vs. NCBI nr
Match: XP_022972384.1 (22.0 kDa heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 362.5 bits (929), Expect = 9.5e-97
Identity = 188/201 (93.53%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MSMGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQ 60
           MS GL R MVCIFLPLAV LFVTHQHAAHALMPYRSIWDIMQP    GGFSEDPFRILEQ
Sbjct: 1   MSTGLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQP----GGFSEDPFRILEQ 60

Query: 61  SPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120
           SPLGV RSAVDTVAIARTDWKETSGEH+IWMDIPGVKKEDLKIEVEENSVLRISGEMKGE
Sbjct: 61  SPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE 120

Query: 121 SEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 180
            EVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE KKEAKV
Sbjct: 121 REVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKV 180

Query: 181 VKIEEGSMSGGEDLKASRAQV 202
           VKIEEGSMSGGEDLKASRA+V
Sbjct: 181 VKIEEGSMSGGEDLKASRAEV 196

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BLAST of Carg16357 vs. NCBI nr
Match: XP_004136960.1 (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus] >KGN43890.1 Heat-shock protein [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 156/198 (78.79%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 3   MGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR  + + L LA   F T Q  A+ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPG+K+EDLKIEVEEN VLRISGEMKGE+E
Sbjct: 64  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           V GERWHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDLKASRA 200
           KIEEG+ SGGEDLKA++A
Sbjct: 184 KIEEGAKSGGEDLKATKA 195

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BLAST of Carg16357 vs. TAIR10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL  
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 173 EKKKEAKVVKI 184
           EK K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

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BLAST of Carg16357 vs. TAIR10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ L+      P S+   +A AR DWKET+  H+   D+PG+KKE++K+E+E++SVL+
Sbjct: 28  DPFKELQ-----FPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLK 87

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           ISGE   E E + + WHR ERSS G F R+FRLP N  M+ +KA +ENGVL VTVPK+ E
Sbjct: 88  ISGERHVEKEEKQDTWHRVERSSGG-FSRKFRLPENVKMDQVKASMENGVLTVTVPKV-E 147

Query: 173 EKKKEAKVVKIE 185
             KK+A+V  I+
Sbjct: 148 TNKKKAQVKSID 152

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BLAST of Carg16357 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 50  FSEDPFRILE--QSPLGVPRS-AVDTVAI--ARTDWKETSGEHMIWMDIPGVKKEDLKIE 109
           FS D F   E   +P G+  + A+D  A   A+ DW+ET   H+   D+PG++KE++K+E
Sbjct: 19  FSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVE 78

Query: 110 VEENSVLRISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLK 169
           VE+ ++L+ISGE   E+E + ++WHR ER SSG+F R+FRLP NA ME IKA +ENGVL 
Sbjct: 79  VEDGNILQISGERSNENEEKNDKWHRVER-SSGKFTRRFRLPENAKMEEIKASMENGVLS 138

Query: 170 VTVPKLPEEKKKEAKVVKI 184
           VTVPK+P EKK E K + I
Sbjct: 139 VTVPKVP-EKKPEVKSIDI 155

[Close]

BLAST of Carg16357 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 8.8e-28
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ L  S L    SA   +  AR DW+ET   H+   D+PG+KKE++K+E+EE+SVL+
Sbjct: 26  DPFKELTSSSLSRENSA---IVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLK 85

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           ISGE   E E + + WHR ER SSG+F R+FRLP N  M+ +KA +ENGVL VTVPK  E
Sbjct: 86  ISGERHVEKEDKNDTWHRVER-SSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPK-AE 145

Query: 173 EKKKEAKVVKI 184
            KK + K ++I
Sbjct: 146 TKKADVKSIQI 151

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BLAST of Carg16357 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 53  DPFR--ILEQSPLGVPRSAVDTVAI--ARTDWKETSGEHMIWMDIPGVKKEDLKIEVEEN 112
           DPF       S L    +A D  A   AR DWKET   H+   D+PG+KKE++K+EVE+ 
Sbjct: 25  DPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDK 84

Query: 113 SVLRISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVP 172
           +VL+ISGE   E+E + ++WHR ER +SG+F R+FRLP NA ME +KA +ENGVL V VP
Sbjct: 85  NVLQISGERSKENEEKNDKWHRVER-ASGKFMRRFRLPENAKMEEVKATMENGVLTVVVP 144

Query: 173 KLPEEKKKEAKVVKI 184
           K P EKK + K + I
Sbjct: 145 KAP-EKKPQVKSIDI 157

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BLAST of Carg16357 vs. Swiss-Prot
Match: sp|Q38806|HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-35
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL  
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 173 EKKKEAKVVKI 184
           EK K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

[Close]

BLAST of Carg16357 vs. Swiss-Prot
Match: sp|P19244|HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33
Identity = 72/134 (53.73%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVD-TVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVL 112
           DPFR+LEQ P GV +     T++ AR DWKET   H+I +D+PG+KK+D+KIEVEEN VL
Sbjct: 51  DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVL 110

Query: 113 RISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 172
           R+SGE K E + +G+ WHR ER S G+FWRQF+LP N +++ +KA +ENGVL +T+ KL 
Sbjct: 111 RVSGERKKEEDKKGDHWHRVER-SYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLS 170

Query: 173 EEKKKEAKVVKIEE 186
            +K K  ++V I E
Sbjct: 171 HDKIKGPRMVSIVE 183

[Close]

BLAST of Carg16357 vs. Swiss-Prot
Match: sp|P30236|HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-33
Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPR-SAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVL 112
           DPFR+LE  P GV +  A   ++ AR DWKET   H+I +D+PG+K+E++K+EVEEN VL
Sbjct: 43  DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVL 102

Query: 113 RISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 172
           R+SGE K E E +G+ WHR ER S G+FWRQFRLP N +++ +KA LENGVL +T+ KL 
Sbjct: 103 RVSGERKKEEEKKGDHWHRVER-SYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLS 162

Query: 173 EEKKKEAKVVKI 184
             K K  +VV I
Sbjct: 163 PGKIKGPRVVSI 173

[Close]

BLAST of Carg16357 vs. Swiss-Prot
Match: sp|Q53M11|HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.9e-30
Identity = 80/173 (46.24%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 48  GGFSEDPFRILEQSPL----GVPRSAV----DTVAIARTDWKETSGEHMIWMDIPGVKKE 107
           G   +DPFR+LEQSPL    GV  +A       VA+AR DWKET   H++ +D+PGV++ 
Sbjct: 36  GYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRG 95

Query: 108 DLKIEVEENS-VLRISGEMK-------GESEVEGERWHRAERSSSGRFWRQFRLPGNANM 167
           D+++EV+E S VLR+SGE +        E E +G RWHRAER ++GRFWR+FR+P  A++
Sbjct: 96  DVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAER-AAGRFWRRFRMPPGADV 155

Query: 168 EGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEEGSMSG---GEDLKASRAQV 202
             + A L++GVL VTVPK+P  + +E +VV I +G+ +G    E +KAS+A++
Sbjct: 156 GRVAARLDDGVLTVTVPKVPGHRGREPRVVAI-DGAGAGDMEAEVVKASKAEM 206

[Close]

BLAST of Carg16357 vs. Swiss-Prot
Match: sp|Q7XUW5|HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 4.9e-28
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPFRILE  P G  R  V  +++AR DW+ET   H + +D+PG++KEDL++EVE+N VLR
Sbjct: 53  DPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLR 112

Query: 113 ISGE----MKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVP 172
           ISGE             + WHR ER S GRFWRQ RLP NA+++ I A L+NGVL V   
Sbjct: 113 ISGERXXXXXXXXXXXXDHWHREER-SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFR 172

Query: 173 KLPEEKKKEAKVVKIEEGSMSGGED 194
           KL  ++ K  +VV I   + +GG+D
Sbjct: 173 KLAPDQIKGPRVVGI---ASAGGDD 193

[Close]

BLAST of Carg16357 vs. TrEMBL
Match: tr|A0A0A0K2J0|A0A0A0K2J0_CUCSA (Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 7.7e-79
Identity = 156/198 (78.79%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 3   MGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR  + + L LA   F T Q  A+ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPG+K+EDLKIEVEEN VLRISGEMKGE+E
Sbjct: 64  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           V GERWHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDLKASRA 200
           KIEEG+ SGGEDLKA++A
Sbjct: 184 KIEEGAKSGGEDLKATKA 195

[Close]

BLAST of Carg16357 vs. TrEMBL
Match: tr|A0A1S3BZX9|A0A1S3BZX9_CUCME (22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-78
Identity = 154/200 (77.00%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 3   MGLPRRMVCIFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR  + + L LA       Q   +ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFLAAQQ--VNALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE E
Sbjct: 64  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           VEGERWHRAER SSSGRFWRQFR+PGNA+MEGI+AHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDLKASRAQV 202
           KIEEG+ SGGEDLKA++A++
Sbjct: 184 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Carg16357 vs. TrEMBL
Match: tr|H6TB39|H6TB39_CITLA (HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-75
Identity = 148/201 (73.63%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 3   MGLPRRMVCIFLPLAVLLFV-THQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQS 62
           MGLPR ++ + LPL  LLF+      A+ALMPYRS+WD+MQP    GG++EDPFRILEQS
Sbjct: 4   MGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQP----GGYTEDPFRILEQS 63

Query: 63  PLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGES 122
           PL VP+SAVDT+A+AR DWKET+ EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE+
Sbjct: 64  PLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEA 123

Query: 123 EVEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 182
           EVEGERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGVLKV VPKLP+EKK+EAKV
Sbjct: 124 EVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKV 183

Query: 183 VKIEEGSMSGGEDLKASRAQV 202
           VKIEE   +GGEDLK ++A++
Sbjct: 184 VKIEEEGKAGGEDLKPTKAEM 200

[Close]

BLAST of Carg16357 vs. TrEMBL
Match: tr|A0A1S3ZRR0|A0A1S3ZRR0_TOBAC (22.0 kDa class IV heat shock protein-like OS=Nicotiana tabacum OX=4097 GN=LOC107789670 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54
Identity = 118/192 (61.46%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 12  IFLPLAVLLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPRSAV 71
           + L +AV+LF+  Q    ALMPY R  WD+  P        EDPF+ILEQ PL +P+  V
Sbjct: 12  LVLAMAVVLFLPSQ--TEALMPYTRPFWDLTFP-------PEDPFKILEQIPLTIPK-GV 71

Query: 72  DTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGERWHR 131
           D++A+AR+DWKET  EH+I +DIPG+K++D+KIEVEEN VLRI GE K E EVEGE+WHR
Sbjct: 72  DSIALARSDWKETGTEHVITLDIPGMKRDDIKIEVEENRVLRIIGERKIEEEVEGEKWHR 131

Query: 132 AERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKI-EEGSMS 191
           AER +SG+FWRQFRLPGNA++E IKAHLENGVLK+TVPKL EEKKK+ KV+ I E+G+ +
Sbjct: 132 AER-TSGKFWRQFRLPGNADLEHIKAHLENGVLKITVPKLAEEKKKQTKVINIAEDGNSA 191

Query: 192 GGEDLKASRAQV 202
           GGED+KA++A++
Sbjct: 192 GGEDIKATKAEM 192

[Close]

BLAST of Carg16357 vs. TrEMBL
Match: tr|A0A1J6IFX4|A0A1J6IFX4_NICAT (22.0 kDa class iv heat shock protein OS=Nicotiana attenuata OX=49451 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-54
Identity = 117/192 (60.94%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 12  IFLPLAVLLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPRSAV 71
           + L +AV+LF+  Q     LMPY R  WD+  P        EDPF+ILEQ PL +P+  V
Sbjct: 12  LVLAMAVVLFLPSQ--TEGLMPYTRPFWDLTFP-------PEDPFKILEQIPLTIPK-GV 71

Query: 72  DTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGERWHR 131
           DT+A+AR+DWKET  EH+I +DIPG+K++D+KIEVEEN VL++SGE K E EVEGE+WHR
Sbjct: 72  DTIALARSDWKETGTEHVITLDIPGMKRDDIKIEVEENRVLKVSGERKIEEEVEGEKWHR 131

Query: 132 AERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKI-EEGSMS 191
           AER +SG+FWRQFRLPGNA++E IKAHLENGVLK+TVPKL EE KK+ KV+ I EEG+ +
Sbjct: 132 AER-TSGKFWRQFRLPGNADLEHIKAHLENGVLKITVPKLAEETKKQTKVINIAEEGNSA 191

Query: 192 GGEDLKASRAQV 202
           GGED+KA++A++
Sbjct: 192 GGEDIKATKAEM 192

The following BLAST results are available for this feature:

BLAST of Carg16357 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952788.1	4.3e-105	97.51	22.0 kDa heat shock protein-like isoform X1 [Cucurbita moschata]	[more]
XP_023553856.1	3.4e-102	96.02	22.0 kDa heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952789.1	2.9e-101	95.52	22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata]	[more]
XP_022972384.1	9.5e-97	93.53	22.0 kDa heat shock protein-like [Cucurbita maxima]	[more]
XP_004136960.1	1.2e-78	78.79	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus] >KGN43890.1 Heat-s...	[more]

BLAST of Carg16357 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10250.1	1.3e-36	57.25	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.8e-28	50.76	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.8e-28	50.36	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	8.8e-28	51.15	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	1.5e-27	50.37	heat shock protein 18.2	[more]

BLAST of Carg16357 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38806\|HSP22_ARATH	2.4e-35	57.25	22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1	[more]
sp\|P19244\|HSP41_PEA	2.3e-33	53.73	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]
sp\|P30236\|HSP41_SOYBN	8.7e-33	54.55	22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1	[more]
sp\|Q53M11\|HS219_ORYSJ	6.9e-30	46.24	21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 ...	[more]
sp\|Q7XUW5\|HS232_ORYSJ	4.9e-28	48.28	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 ...	[more]

BLAST of Carg16357 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2J0\|A0A0A0K2J0_CUCSA	7.7e-79	78.79	Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1	[more]
tr\|A0A1S3BZX9\|A0A1S3BZX9_CUCME	6.6e-78	77.00	22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV...	[more]
tr\|H6TB39\|H6TB39_CITLA	1.0e-75	73.63	HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
tr\|A0A1S3ZRR0\|A0A1S3ZRR0_TOBAC	2.3e-54	61.46	22.0 kDa class IV heat shock protein-like OS=Nicotiana tabacum OX=4097 GN=LOC107...	[more]
tr\|A0A1J6IFX4\|A0A1J6IFX4_NICAT	3.0e-54	60.94	22.0 kDa class iv heat shock protein OS=Nicotiana attenuata OX=49451 GN=HSP22.0 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16357-RA	Carg16357-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 36..183 e-value: 9.4E-37 score: 128.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 65..180
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 79..183 e-value: 3.4E-25 score: 88.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 69..184 score: 25.612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..201
None	No IPR available	PANTHER	PTHR11527:SF170	SUBFAMILY NOT NAMED	coord: 26..189
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 77..169 e-value: 3.12802E-44 score: 143.6
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 26..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16357	Cla016060	Watermelon (97103) v1	carwmB0455
Carg16357	Csa7G072770	Cucumber (Chinese Long) v2	carcuB0488
Carg16357	MELO3C018485	Melon (DHL92) v3.5.1	carmeB0458
Carg16357	ClCG02G006430	Watermelon (Charleston Gray)	carwcgB0445
Carg16357	CSPI07G07260	Wild cucumber (PI 183967)	carcpiB0494
Carg16357	Cucsa.219490	Cucumber (Gy14) v1	carcgyB0525
Carg16357	CmaCh19G005760	Cucurbita maxima (Rimu)	carcmaB0632
Carg16357	CmoCh01G017970	Cucurbita moschata (Rifu)	carcmoB0614
Carg16357	CmoCh19G005900	Cucurbita moschata (Rifu)	carcmoB0615
Carg16357	Lsi03G005410	Bottle gourd (USVL1VR-Ls)	carlsiB411
Carg16357	Cp4.1LG15g04660	Cucurbita pepo (Zucchini)	carcpeB0637
Carg16357	MELO3C018485.2	Melon (DHL92) v3.6.1	carmedB0461
Carg16357	CsaV3_7G008210	Cucumber (Chinese Long) v3	carcucB0491
Carg16357	Cla97C02G033390	Watermelon (97103) v2	carwmbB0477
Carg16357	Bhi05G000978	Wax gourd	carwgoB0549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16357	Silver-seed gourd	carcarB228
Carg16357	Silver-seed gourd	carcarB402
Carg16357	Cucumber (Gy14) v2	carcgybB0464
Carg16357	Cucumber (Gy14) v2	carcgybB0465
Carg16357	Cucumber (Gy14) v1	carcgyB0524
Carg16357	Cucurbita maxima (Rimu)	carcmaB0630
Carg16357	Cucurbita maxima (Rimu)	carcmaB0634
Carg16357	Cucurbita moschata (Rifu)	carcmoB0612
Carg16357	Cucurbita moschata (Rifu)	carcmoB0616
Carg16357	Cucurbita pepo (Zucchini)	carcpeB0639
Carg16357	Wild cucumber (PI 183967)	carcpiB0493
Carg16357	Cucumber (Chinese Long) v2	carcuB0487
Carg16357	Cucumber (Chinese Long) v3	carcucB0490
Carg16357	Bottle gourd (USVL1VR-Ls)	carlsiB414
Carg16357	Melon (DHL92) v3.5.1	carmeB0460
Carg16357	Melon (DHL92) v3.6.1	carmedB0463
Carg16357	Watermelon (97103) v2	carwmbB0478
Carg16357	Watermelon (97103) v2	carwmbB0480
Carg16357	Wax gourd	carwgoB0552
Carg16357	Wax gourd	carwgoB0555