CmaCh19G005760 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCCTCATACGTCGCCGTCGCCGTCCTATAAAAGCCTCCTCCGCCCCCTAATCTACACCATTCGAACTGCAATCAACAAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGTAACTTAATATAGACCTCAAATCTGAGTATGTCAGGAATCACGACCATATGATATTGTCTTTTTGATTTCGTATTGATATTGTCTTTTTTATTTCGTACTCATTTTCTCTAATTAGTTAGAGTGGGACTCATTTTCAATAATTTAAAGGTAAAATTTATATGTTTTTAGAGGACGTACTTGATCCATTAGACCTTGAAACTCGTAATTTAGCAACAAAAAAAACTTTAGATCCTCCGAATAGTCTCCTCTTAATTGAGGCTCAGACTTCTTTTTTTGGAGCTCTCAAGTTACATTTTGTCTGTAATGTTCTTGAATGGTCTCTCCTTAATCAGTACTCTTTTTTTGTGGCGTTCTAACTCTTGAATCTAGAAAGTAGGGTTGCTTAACTTTACAAATTAGAGCTCATTAAAGCACGATTCACATTAATCTTTGATAGAAAGAACGGGGAAGTTCTAATAGAAAAATATTAGAAGAGAAAATAATAAAATTGATATTGTCATGGTTGACATGGCTTTGATATGATCTTAAAAATTGATATTGTCGAGCATAAGCTTTTATGTGTGATTCCTTAATCCTTATTAGAATTATTCGGGTGGGTGTCACAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGAAATTTTTATGAGAATAATAATTTTGGAATATATATATATGATTTAATAAAAATTTATAGCTATTTTCACTTTATAATTTGTATTTAAAATTAGTTCGACATAAAATTATTATTTTAGTTAAAATTGGGTCAAACCCACCCCATTAAATTTAATAAAATTAATGTATTTTTAATATTAATTTTTAGATAAAGATCATCCA GCGCCTCATACGTCGCCGTCGCCGTCCTATAAAAGCCTCCTCCGCCCCCTAATCTACACCATTCGAACTGCAATCAACAAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGAAATTTTTATGAGAATAATAATTTTGGAATATATATATATGATTTAATAAAAATTTATAGCTATTTTCACTTTATAATTTGTATTTAAAATTAGTTCGACATAAAATTATTATTTTAGTTAAAATTGGGTCAAACCCACCCCATTAAATTTAATAAAATTAATGTATTTTTAATATTAATTTTTAGATAAAGATCATCCA ATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAA MSTGLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKEAKVVKIEEGSMSGGEDLKASRAEV
BLAST of CmaCh19G005760 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 8.9e-35 Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of CmaCh19G005760 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33 Identity = 73/134 (54.48%), Postives = 98/134 (73.13%), Query Frame = 1
BLAST of CmaCh19G005760 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32 Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 1
BLAST of CmaCh19G005760 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30 Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = 1
BLAST of CmaCh19G005760 vs. Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29 Identity = 87/189 (46.03%), Postives = 124/189 (65.61%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TrEMBL
Match: A0A0A0K2J0_CUCSA (Heat-shock protein OS=Cucumis sativus GN=Csa_7G072770 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.9e-77 Identity = 153/193 (79.27%), Postives = 170/193 (88.08%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TrEMBL
Match: H6TB39_CITLA (HSP22.9 OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.0e-74 Identity = 149/197 (75.63%), Postives = 173/197 (87.82%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TrEMBL
Match: K4BKP5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.1e-50 Identity = 116/190 (61.05%), Postives = 146/190 (76.84%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TrEMBL
Match: M1C9Q4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024476 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 8.9e-50 Identity = 113/191 (59.16%), Postives = 144/191 (75.39%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TrEMBL
Match: G3EXM7_9ROSI (Heat shock protein 22 OS=Corylus heterophylla PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48 Identity = 112/195 (57.44%), Postives = 150/195 (76.92%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 148.3 bits (373), Expect = 5.0e-36 Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 127.5 bits (319), Expect = 9.1e-30 Identity = 70/138 (50.72%), Postives = 96/138 (69.57%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29 Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 1
BLAST of CmaCh19G005760 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 124.4 bits (311), Expect = 7.7e-29 Identity = 66/131 (50.38%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of CmaCh19G005760 vs. NCBI nr
Match: gi|449438367|ref|XP_004136960.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus]) HSP 1 Score: 296.2 bits (757), Expect = 4.2e-77 Identity = 153/193 (79.27%), Postives = 170/193 (88.08%), Query Frame = 1
BLAST of CmaCh19G005760 vs. NCBI nr
Match: gi|659109986|ref|XP_008454987.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo]) HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76 Identity = 152/195 (77.95%), Postives = 170/195 (87.18%), Query Frame = 1
BLAST of CmaCh19G005760 vs. NCBI nr
Match: gi|315932712|gb|ADU55786.1| (HSP22.9 [Citrullus lanatus]) HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74 Identity = 149/197 (75.63%), Postives = 173/197 (87.82%), Query Frame = 1
BLAST of CmaCh19G005760 vs. NCBI nr
Match: gi|698524090|ref|XP_009758848.1| (PREDICTED: 16.9 kDa class I heat shock protein 1-like [Nicotiana sylvestris]) HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52 Identity = 111/183 (60.66%), Postives = 141/183 (77.05%), Query Frame = 1
BLAST of CmaCh19G005760 vs. NCBI nr
Match: gi|970016207|ref|XP_015069201.1| (PREDICTED: 22.0 kDa class IV heat shock protein-like [Solanum pennellii]) HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51 Identity = 117/187 (62.57%), Postives = 148/187 (79.14%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |