CmaCh19G005760.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G005760.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	22.0 kDa class IV heat shock protein
Location	Cma_Chr19 : 6446927 .. 6448490 (+)
Sequence length	957

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCCTCATACGTCGCCGTCGCCGTCCTATAAAAGCCTCCTCCGCCCCCTAATCTACACCATTCGAACTGCAATCAACAAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGTAACTTAATATAGACCTCAAATCTGAGTATGTCAGGAATCACGACCATATGATATTGTCTTTTTGATTTCGTATTGATATTGTCTTTTTTATTTCGTACTCATTTTCTCTAATTAGTTAGAGTGGGACTCATTTTCAATAATTTAAAGGTAAAATTTATATGTTTTTAGAGGACGTACTTGATCCATTAGACCTTGAAACTCGTAATTTAGCAACAAAAAAAACTTTAGATCCTCCGAATAGTCTCCTCTTAATTGAGGCTCAGACTTCTTTTTTTGGAGCTCTCAAGTTACATTTTGTCTGTAATGTTCTTGAATGGTCTCTCCTTAATCAGTACTCTTTTTTTGTGGCGTTCTAACTCTTGAATCTAGAAAGTAGGGTTGCTTAACTTTACAAATTAGAGCTCATTAAAGCACGATTCACATTAATCTTTGATAGAAAGAACGGGGAAGTTCTAATAGAAAAATATTAGAAGAGAAAATAATAAAATTGATATTGTCATGGTTGACATGGCTTTGATATGATCTTAAAAATTGATATTGTCGAGCATAAGCTTTTATGTGTGATTCCTTAATCCTTATTAGAATTATTCGGGTGGGTGTCACAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGAAATTTTTATGAGAATAATAATTTTGGAATATATATATATGATTTAATAAAAATTTATAGCTATTTTCACTTTATAATTTGTATTTAAAATTAGTTCGACATAAAATTATTATTTTAGTTAAAATTGGGTCAAACCCACCCCATTAAATTTAATAAAATTAATGTATTTTTAATATTAATTTTTAGATAAAGATCATCCA

mRNA sequence

GCGCCTCATACGTCGCCGTCGCCGTCCTATAAAAGCCTCCTCCGCCCCCTAATCTACACCATTCGAACTGCAATCAACAAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAAAATAATGAGACGGATGTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGAAATTTTTATGAGAATAATAATTTTGGAATATATATATATGATTTAATAAAAATTTATAGCTATTTTCACTTTATAATTTGTATTTAAAATTAGTTCGACATAAAATTATTATTTTAGTTAAAATTGGGTCAAACCCACCCCATTAAATTTAATAAAATTAATGTATTTTTAATATTAATTTTTAGATAAAGATCATCCA

Coding sequence (CDS)

ATGAGTACGGGGCTACACCGAAGCATGGTTTGCATCTTTCTTCCACTCGCAGTGTTCCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATATGGGACATCATGCAACCAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTTCAAGATCAGCGGTGGACACAGTGGCAATAGCACGCACAGACTGGAAGGAGACAAGCGGGGAGCACGTGATATGGATGGACATTCCCGGCGTGAAGAAGGAGGATTTGAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGGATCAGCGGAGAGATGAAGGGAGAGCGAGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGGAGGCGAAGGTGGTGAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATCTGAAGGCTTCCAGAGCTGAAGTCTAA

Protein sequence

MSTGLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKEAKVVKIEEGSMSGGEDLKASRAEV

Homology

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BLAST of CmaCh19G005760.1 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.9e-35
Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLR 108
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 109 ISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKL-P 168
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL P
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 169 EEKKEAKVVKI 179
           E+ K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

[Close]

BLAST of CmaCh19G005760.1 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33
Identity = 73/134 (54.48%), Postives = 98/134 (73.13%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVD-TVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVL 108
           DPFR+LEQ P GV +     T++ AR DWKET   HVI +D+PG+KK+D+KIEVEEN VL
Sbjct: 51  DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVL 110

Query: 109 RISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 168
           R+SGE K E + +G+ WHR ER S G+FWRQF+LP N +++ +KA +ENGVL +T+ KL 
Sbjct: 111 RVSGERKKEEDKKGDHWHRVER-SYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLS 170

Query: 169 EEK-KEAKVVKIEE 181
            +K K  ++V I E
Sbjct: 171 HDKIKGPRMVSIVE 183

[Close]

BLAST of CmaCh19G005760.1 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32
Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVD-TVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVL 108
           DPFR+LE  P GV +      ++ AR DWKET   HVI +D+PG+K+E++K+EVEEN VL
Sbjct: 43  DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVL 102

Query: 109 RISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKL- 168
           R+SGE K E E +G+ WHR ER S G+FWRQFRLP N +++ +KA LENGVL +T+ KL 
Sbjct: 103 RVSGERKKEEEKKGDHWHRVER-SYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLS 162

Query: 169 PEEKKEAKVVKI 179
           P + K  +VV I
Sbjct: 163 PGKIKGPRVVSI 173

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BLAST of CmaCh19G005760.1 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLR 108
           DPFRILE  P G  R  V  +++AR DW+ET   H + +D+PG++KEDL++EVE+N VLR
Sbjct: 53  DPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLR 112

Query: 109 ISGEMKGEREVE----GERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVP 168
           ISGE + E   E    G+ WHR ER S GRFWRQ RLP NA+++ I A L+NGVL V   
Sbjct: 113 ISGERRREETTEQKGGGDHWHREER-SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFR 172

Query: 169 KL-PEEKKEAKVVKIEEGSMSGGED 189
           KL P++ K  +VV I   + +GG+D
Sbjct: 173 KLAPDQIKGPRVVGI---ASAGGDD 193

[Close]

BLAST of CmaCh19G005760.1 vs. Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 87/189 (46.03%), Postives = 124/189 (65.61%), Query Frame = 1


Query: 28  AHALMPYRSIWDIMQPGGFSEDPFRILEQSPL----GVSRSAVD----TVAIARTDWKET 87
           A AL+PY         G   +DPFR+LEQSPL    GV+ +A       VA+AR DWKET
Sbjct: 27  AAALVPYGY-------GYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKET 86

Query: 88  SGEHVIWMDIPGVKKEDLKIEVEENS-VLRISGEMKG-------EREVEGERWHRAERSS 147
              HV+ +D+PGV++ D+++EV+E S VLR+SGE +        E E +G RWHRAER++
Sbjct: 87  PEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAA 146

Query: 148 SGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEK-KEAKVVKIEEGSMSG---GE 197
            GRFWR+FR+P  A++  + A L++GVL VTVPK+P  + +E +VV I +G+ +G    E
Sbjct: 147 -GRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAI-DGAGAGDMEAE 206

[Close]

BLAST of CmaCh19G005760.1 vs. TrEMBL
Match: A0A0A0K2J0_CUCSA (Heat-shock protein OS=Cucumis sativus GN=Csa_7G072770 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-77
Identity = 153/193 (79.27%), Postives = 170/193 (88.08%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVSR 63
           GL R+ + + L LA + F T Q  A+ALMPYRSIWDIMQPGG+SEDPFRILEQSPL V +
Sbjct: 5   GLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQPGGYSEDPFRILEQSPLSVPK 64

Query: 64  SAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGER 123
           SAVDT+A+AR DWKET  EHVIWMDIPG+K+EDLKIEVEEN VLRISGEMKGE EV GER
Sbjct: 65  SAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAEVAGER 124

Query: 124 WHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKIEEG 183
           WHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+E KKEAKVVKIEEG
Sbjct: 125 WHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVVKIEEG 184

Query: 184 SMSGGEDLKASRA 195
           + SGGEDLKA++A
Sbjct: 185 AKSGGEDLKATKA 195

[Close]

BLAST of CmaCh19G005760.1 vs. TrEMBL
Match: H6TB39_CITLA (HSP22.9 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.0e-74
Identity = 149/197 (75.63%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLA--VFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGV 63
           GL R+++ + LPL   +FLFV +Q A +ALMPYRS+WD+MQPGG++EDPFRILEQSPL V
Sbjct: 5   GLPRNLLFLILPLGFLLFLFVANQQA-NALMPYRSVWDLMQPGGYTEDPFRILEQSPLSV 64

Query: 64  SRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEG 123
            +SAVDT+A+AR DWKET+ EHVIWMDIPGVK+EDLKIEVEEN VLRISGEMKGE EVEG
Sbjct: 65  PKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 124

Query: 124 ERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKK-EAKVVKIE 183
           ERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGVLKV VPKLP+EKK EAKVVKIE
Sbjct: 125 ERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVVKIE 184

Query: 184 EGSMSGGEDLKASRAEV 197
           E   +GGEDLK ++AE+
Sbjct: 185 EEGKAGGEDLKPTKAEM 200

[Close]

BLAST of CmaCh19G005760.1 vs. TrEMBL
Match: K4BKP5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-50
Identity = 116/190 (61.05%), Postives = 146/190 (76.84%), Query Frame = 1


Query: 9   MVCIFLPLAVFLFVTHQHAAHALMPY-RSIWDIMQPGGFSEDPFRILEQSPLGVSRSAVD 68
           M  + L + V LF +      ALMPY R  WDI  P    EDPFRILEQ+PL + +  V+
Sbjct: 9   MSFLVLAMVVVLFPSQ---IKALMPYTRPFWDIAFP---PEDPFRILEQTPLTIPKG-VE 68

Query: 69  TVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHRA 128
           ++A+ R+DWKET+ EHVI +DIPG+KKED+KIEVEEN VLR+SGE K E E+EGE+WHRA
Sbjct: 69  SIALTRSDWKETATEHVITLDIPGMKKEDVKIEVEENRVLRVSGERKTEEEIEGEKWHRA 128

Query: 129 ERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKIEEGSMSGG 188
           ER + G+FWRQFRLPGNA++E IKAHLENGVLK+TVPKL EE KK++KV+ I E    GG
Sbjct: 129 ER-TCGKFWRQFRLPGNADLEHIKAHLENGVLKITVPKLAEEKKKQSKVISIAEA--VGG 188

Query: 189 EDLKASRAEV 197
           ED+KA++AE+
Sbjct: 189 EDIKANKAEM 188

[Close]

BLAST of CmaCh19G005760.1 vs. TrEMBL
Match: M1C9Q4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024476 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.9e-50
Identity = 113/191 (59.16%), Postives = 144/191 (75.39%), Query Frame = 1


Query: 8   SMVCIFLPLAVFLFVTHQHAAHALMPY-RSIWDIMQPGGFSEDPFRILEQSPLGVSRSAV 67
           +M  +FLP  +           ALMPY R  WDI  P   +EDPFRILEQ+PL + +  V
Sbjct: 15  AMAVVFLPSQI----------QALMPYTRPFWDIAFP---TEDPFRILEQTPLTIPKG-V 74

Query: 68  DTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHR 127
           +++A+ R+DWKET+ EHVI +DIPG+KKED+KIEVEEN VLR+SGE K E E+EGE+WHR
Sbjct: 75  ESIALTRSDWKETATEHVITLDIPGMKKEDIKIEVEENRVLRVSGERKTEEEIEGEKWHR 134

Query: 128 AERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKI-EEGSMS 187
           AER + G+FWRQFRLPGNA++E IK +LENGVLK+TVPKL EE KK++KV+ I EE    
Sbjct: 135 AER-TCGKFWRQFRLPGNADLEHIKVNLENGVLKITVPKLAEEKKKQSKVISIAEERKAV 190

Query: 188 GGEDLKASRAE 196
           GGED+ A++AE
Sbjct: 195 GGEDITANKAE 190

[Close]

BLAST of CmaCh19G005760.1 vs. TrEMBL
Match: G3EXM7_9ROSI (Heat shock protein 22 OS=Corylus heterophylla PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48
Identity = 112/195 (57.44%), Postives = 150/195 (76.92%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLAVFLFVTHQHAAHALMPYR--SIWDIMQPGGFSEDPFRILEQSPLGV 63
           G++ SM+ +     V   +  Q  A+ALMPY   S+WDI+ P  +SEDP RILEQ+PL +
Sbjct: 5   GINASMLVVAAVTVVIGLMATQ--ANALMPYTRPSLWDILLP--YSEDPLRILEQTPLTI 64

Query: 64  SRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGE-REVE 123
            R  V+T+ +A +DWKET  EHVI +D+PG+KK+D+KIEVEEN VLRISGE  G+ +EVE
Sbjct: 65  PRG-VETLTLAPSDWKETPTEHVISLDVPGMKKDDIKIEVEENRVLRISGERVGKNQEVE 124

Query: 124 GERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKEAKVVKI-E 183
           GERWHRAER ++G+FWRQFRLPGNA+++ +KA LE+GVL++TVPK  EEK++ KV+ I E
Sbjct: 125 GERWHRAER-TNGKFWRQFRLPGNADLDHVKARLEDGVLRITVPKFAEEKRQPKVINIAE 184

Query: 184 EGSMSGGEDLKASRA 195
           EGS   GED+KA++A
Sbjct: 185 EGSF--GEDIKATKA 191

[Close]

BLAST of CmaCh19G005760.1 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-36
Identity = 75/131 (57.25%), Postives = 98/131 (74.81%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLR 108
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 109 ISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKL-P 168
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL P
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 169 EEKKEAKVVKI 179
           E+ K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

[Close]

BLAST of CmaCh19G005760.1 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.1e-30
Identity = 70/138 (50.72%), Postives = 96/138 (69.57%), Query Frame = 1


Query: 46  FSEDPFRILEQ--SPLGVSRS-AVDTVAI--ARTDWKETSGEHVIWMDIPGVKKEDLKIE 105
           FS D F   E   +P G++ + A+D  A   A+ DW+ET   HV   D+PG++KE++K+E
Sbjct: 19  FSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVE 78

Query: 106 VEENSVLRISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLK 165
           VE+ ++L+ISGE   E E + ++WHR ER SSG+F R+FRLP NA ME IKA +ENGVL 
Sbjct: 79  VEDGNILQISGERSNENEEKNDKWHRVER-SSGKFTRRFRLPENAKMEEIKASMENGVLS 138

Query: 166 VTVPKLPEEKKEAKVVKI 179
           VTVPK+PE+K E K + I
Sbjct: 139 VTVPKVPEKKPEVKSIDI 155

[Close]

BLAST of CmaCh19G005760.1 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 1


Query: 49  DPFRILE-QSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVL 108
           DPF+ L+  S L    SA+     AR DWKET+  HV   D+PG+KKE++K+E+E++SVL
Sbjct: 27  DPFKELQFPSSLSGETSAITN---ARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVL 86

Query: 109 RISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 168
           +ISGE   E+E + + WHR ER SSG+F R+F+LP N  M+ +KA +ENGVL VTVPK+ 
Sbjct: 87  KISGERHVEKEEKQDTWHRVER-SSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVE 146

Query: 169 EEKKEAKVVKIE 180
           E KK+A+V  I+
Sbjct: 147 EAKKKAQVKSID 154

[Close]

BLAST of CmaCh19G005760.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 1


Query: 49  DPFR--ILEQSPLGVSRSAVDTVAI--ARTDWKETSGEHVIWMDIPGVKKEDLKIEVEEN 108
           DPF       S L  + +A D  A   AR DWKET   HV   D+PG+KKE++K+EVE+ 
Sbjct: 25  DPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDK 84

Query: 109 SVLRISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVP 168
           +VL+ISGE   E E + ++WHR ER +SG+F R+FRLP NA ME +KA +ENGVL V VP
Sbjct: 85  NVLQISGERSKENEEKNDKWHRVER-ASGKFMRRFRLPENAKMEEVKATMENGVLTVVVP 144

Query: 169 KLPEEKKEAKVVKI 179
           K PE+K + K + I
Sbjct: 145 KAPEKKPQVKSIDI 157

[Close]

BLAST of CmaCh19G005760.1 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.7e-29
Identity = 66/131 (50.38%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 49  DPFRILEQSPLGVSRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLR 108
           DPF+ L+        S+   +A AR DWKET+  HV   D+PG+KKE++K+E+E++SVL+
Sbjct: 28  DPFKELQ-----FPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLK 87

Query: 109 ISGEMKGEREVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 168
           ISGE   E+E + + WHR ERSS G F R+FRLP N  M+ +KA +ENGVL VTVPK+  
Sbjct: 88  ISGERHVEKEEKQDTWHRVERSSGG-FSRKFRLPENVKMDQVKASMENGVLTVTVPKVET 147

Query: 169 EKKEAKVVKIE 180
            KK+A+V  I+
Sbjct: 148 NKKKAQVKSID 152

[Close]

BLAST of CmaCh19G005760.1 vs. NCBI nr
Match: gi|449438367|ref|XP_004136960.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 4.2e-77
Identity = 153/193 (79.27%), Postives = 170/193 (88.08%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVSR 63
           GL R+ + + L LA + F T Q  A+ALMPYRSIWDIMQPGG+SEDPFRILEQSPL V +
Sbjct: 5   GLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQPGGYSEDPFRILEQSPLSVPK 64

Query: 64  SAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGER 123
           SAVDT+A+AR DWKET  EHVIWMDIPG+K+EDLKIEVEEN VLRISGEMKGE EV GER
Sbjct: 65  SAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAEVAGER 124

Query: 124 WHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKIEEG 183
           WHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+E KKEAKVVKIEEG
Sbjct: 125 WHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVVKIEEG 184

Query: 184 SMSGGEDLKASRA 195
           + SGGEDLKA++A
Sbjct: 185 AKSGGEDLKATKA 195

[Close]

BLAST of CmaCh19G005760.1 vs. NCBI nr
Match: gi|659109986|ref|XP_008454987.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 152/195 (77.95%), Postives = 170/195 (87.18%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLAVFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVSR 63
           GL R+ + + L LA +     Q   +ALMPYRSIWDIMQPGG+SEDPFRILEQSPL V +
Sbjct: 5   GLPRNSLFLILGLAFYFLAAQQ--VNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSVPK 64

Query: 64  SAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGER 123
           SAVDT+A+AR DWKET  EHVIWMDIPGVK+EDLKIEVEEN VLRISGEMKGE EVEGER
Sbjct: 65  SAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGEVEGER 124

Query: 124 WHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKIEEG 183
           WHRAER SSSGRFWRQFR+PGNA+MEGI+AHLENGVLKV VPKLP+E KKEAKVVKIEEG
Sbjct: 125 WHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIEEG 184

Query: 184 SMSGGEDLKASRAEV 197
           + SGGEDLKA++AE+
Sbjct: 185 AKSGGEDLKATKAEM 197

[Close]

BLAST of CmaCh19G005760.1 vs. NCBI nr
Match: gi|315932712|gb|ADU55786.1| (HSP22.9 [Citrullus lanatus])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 149/197 (75.63%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 4   GLHRSMVCIFLPLA--VFLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGV 63
           GL R+++ + LPL   +FLFV +Q A +ALMPYRS+WD+MQPGG++EDPFRILEQSPL V
Sbjct: 5   GLPRNLLFLILPLGFLLFLFVANQQA-NALMPYRSVWDLMQPGGYTEDPFRILEQSPLSV 64

Query: 64  SRSAVDTVAIARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEG 123
            +SAVDT+A+AR DWKET+ EHVIWMDIPGVK+EDLKIEVEEN VLRISGEMKGE EVEG
Sbjct: 65  PKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 124

Query: 124 ERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKK-EAKVVKIE 183
           ERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGVLKV VPKLP+EKK EAKVVKIE
Sbjct: 125 ERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVVKIE 184

Query: 184 EGSMSGGEDLKASRAEV 197
           E   +GGEDLK ++AE+
Sbjct: 185 EEGKAGGEDLKPTKAEM 200

[Close]

BLAST of CmaCh19G005760.1 vs. NCBI nr
Match: gi|698524090|ref|XP_009758848.1| (PREDICTED: 16.9 kDa class I heat shock protein 1-like [Nicotiana sylvestris])

HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52
Identity = 111/183 (60.66%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 13  FLPLAVFLFVTHQHAAHALMPY-RSIWDIMQPGGFSEDPFRILEQSPLGVSRSAVDTVAI 72
           FL L + +         ALMPY R IWD+M P    +DPF+ILEQ+PL + +    T+A+
Sbjct: 11  FLVLTMMMTTLLPSQTEALMPYTRPIWDLMFP---QDDPFKILEQTPLTIPKGIDQTIAL 70

Query: 73  ARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHRAERSS 132
           AR+DWKET+ EH+I +DIPG++KED+K+EVEEN VLRISGE K E EVEGE+WHRAER +
Sbjct: 71  ARSDWKETAKEHIISLDIPGMRKEDIKVEVEENRVLRISGERKTEEEVEGEKWHRAER-T 130

Query: 133 SGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKEAKVVKIEEGSMSGGEDLKA 192
           SG+FWRQFRLP NA++E IKAH+ENGVLK+TVPKL EEKKEAKV+ I E   +  ED+KA
Sbjct: 131 SGKFWRQFRLPKNADLEHIKAHMENGVLKITVPKLAEEKKEAKVISISEEG-NAAEDIKA 188

Query: 193 SRA 195
           ++A
Sbjct: 191 TKA 188

[Close]

BLAST of CmaCh19G005760.1 vs. NCBI nr
Match: gi|970016207|ref|XP_015069201.1| (PREDICTED: 22.0 kDa class IV heat shock protein-like [Solanum pennellii])

HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51
Identity = 117/187 (62.57%), Postives = 148/187 (79.14%), Query Frame = 1


Query: 13  FLPLAVFLFVTHQHAAHALMPY-RSIWDIMQPGGFSEDPFRILEQSPLGVSRSAVDTVAI 72
           FL LA+ +FV       ALMPY R  WDI  P    EDPFRILEQ+PL + +  V+++A+
Sbjct: 11  FLVLAM-VFVLFPSQIKALMPYTRPFWDIAFP---PEDPFRILEQTPLTIPKG-VESIAL 70

Query: 73  ARTDWKETSGEHVIWMDIPGVKKEDLKIEVEENSVLRISGEMKGEREVEGERWHRAERSS 132
            R+DWKET+ EHVI +DIPG+KKED+KIEVEEN VLR+SGE K E+E+EGE+WHRAER +
Sbjct: 71  TRSDWKETATEHVITLDIPGMKKEDIKIEVEENRVLRVSGERKTEQEIEGEKWHRAER-T 130

Query: 133 SGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEE-KKEAKVVKI-EEGSMSGGEDL 192
            G+FWRQFRLPGNA++E IKA+LENGVLK+TVPKL EE KK++KV+ I EE    GGED+
Sbjct: 131 CGKFWRQFRLPGNADLEHIKANLENGVLKITVPKLAEEKKKQSKVISIAEERKAVGGEDI 190

Query: 193 KASRAEV 197
           KA++AE+
Sbjct: 191 KANKAEM 191

The following BLAST results are available for this feature:

BLAST of CmaCh19G005760.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP22_ARATH	8.9e-35	57.25	22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1	[more]
HSP41_PEA	8.3e-33	54.48	22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1	[more]
HSP41_SOYBN	1.4e-32	54.55	22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1	[more]
HS232_ORYSJ	1.3e-30	51.03	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2	[more]
HS219_ORYSJ	1.1e-29	46.03	21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1	[more]

BLAST of CmaCh19G005760.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2J0_CUCSA	2.9e-77	79.27	Heat-shock protein OS=Cucumis sativus GN=Csa_7G072770 PE=3 SV=1	[more]
H6TB39_CITLA	1.0e-74	75.63	HSP22.9 OS=Citrullus lanatus PE=2 SV=1	[more]
K4BKP5_SOLLC	1.1e-50	61.05	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]
M1C9Q4_SOLTU	8.9e-50	59.16	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024476 PE=3 SV=1	[more]
G3EXM7_9ROSI	3.7e-48	57.44	Heat shock protein 22 OS=Corylus heterophylla PE=2 SV=1	[more]

BLAST of CmaCh19G005760.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10250.1	5.0e-36	57.25	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	9.1e-30	50.72	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	5.9e-29	51.52	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	5.9e-29	50.75	heat shock protein 18.2	[more]
AT1G59860.1	7.7e-29	50.38	HSP20-like chaperones superfamily protein	[more]

BLAST of CmaCh19G005760.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438367\|ref\|XP_004136960.1\|	4.2e-77	79.27	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus]	[more]
gi\|659109986\|ref\|XP_008454987.1\|	1.6e-76	77.95	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo]	[more]
gi\|315932712\|gb\|ADU55786.1\|	1.5e-74	75.63	HSP22.9 [Citrullus lanatus]	[more]
gi\|698524090\|ref\|XP_009758848.1\|	4.7e-52	60.66	PREDICTED: 16.9 kDa class I heat shock protein 1-like [Nicotiana sylvestris]	[more]
gi\|970016207\|ref\|XP_015069201.1\|	1.8e-51	62.57	PREDICTED: 22.0 kDa class IV heat shock protein-like [Solanum pennellii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh19G005760	CmaCh19G005760	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh19G005760.1	CmaCh19G005760.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G005760.1.exon.2	CmaCh19G005760.1.exon.2	exon
CmaCh19G005760.1.exon.1	CmaCh19G005760.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G005760.1.five_prime_UTR.1	CmaCh19G005760.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G005760.1.CDS.1	CmaCh19G005760.1.CDS.1	CDS
CmaCh19G005760.1.CDS.2	CmaCh19G005760.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G005760.1.three_prime_UTR.1	CmaCh19G005760.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 75..178 score: 1.1
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 75..165 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 60..178 score: 8.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 60..178 score: 4.19
None	No IPR available	PANTHER	PTHR11527:SF170	SUBFAMILY NOT NAMED	coord: 8..186 score: 3.2