CmoCh19G005900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	22.0 kDa class IV heat shock protein
Location	Cmo_Chr19 : 6628407 .. 6629798 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATACATCGCCGTGGGCGTCCTATAAAAGCCTCCTCCACCCACAATCCGACCATCCAAACTGCAATCAAACGAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTATGGGGCTACCACGAAGCATGGTTTGCATGTTTCTTCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGTAACTTCATATAGACCAAAAACTTGAGTAGGTTAAGAATCACGATCCTCTTCTACCGTAGATCAACTCTTTAATTAGCTAAGCTGAGATTCATTCTCTAATTTTTAACCATAGGATTCACCCTAATAATCTTTTTTTCAAAGAATGGTAGGATCTTTGACACACAAGAAGGAGTTCGATTCGTTTCATCTGGATTAAATTATGATTTTTTTTTTTTTTTTAATACAACCTAGTTGGTTGTAGTGCGAAATTACCTGTTTTTATCTATCCGACCCATTTTGTACCCCTAACCTATGGGTACTTTGGACCATTTTCTCTTAATTGAGTCGCTCTTTGCTTTTAGTGTCCTTGAATAGCTTCTTAATCGGTGCTCGGTTCTTTGGTTTTTTTTTTTCTTGAGTTCTCAAACTACTTATTTTGTAGTGGCAGCCATTTAGTGTTTCAATAAAATTTGATATGATCATGTGACCATATTAAAATTTGATATTCTTAGTTTTGAATACAAGTTCTTGTCCGTTTTGAACATAAGCTCTTGGGATTAAGATCTTAATTCCGATTATTTTGGTGGGTGTCACAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGATCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATCCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTTAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATGTGAAGCCTTCCAGAGCTGACGTCTAAAATAATGAGACGGATTTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGTAATTTCTATGAGAATAATAAATTTTGGAATATATATATATAATTTAG

mRNA sequence

CTCATACATCGCCGTGGGCGTCCTATAAAAGCCTCCTCCACCCACAATCCGACCATCCAAACTGCAATCAAACGAAGCTTTCTGTTCTTTGTATTTGAGAAGACGGCGATGAGTATGGGGCTACCACGAAGCATGGTTTGCATGTTTCTTCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGATCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATCCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTTAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATGTGAAGCCTTCCAGAGCTGACGTCTAAAATAATGAGACGGATTTTGAAGGATCTTATTTAATAGGTTTATGCTTTGGATGTAATTTCTATGAGAATAATAAATTTTGGAATATATATATATAATTTAG

Coding sequence (CDS)

ATGAGTATGGGGCTACCACGAAGCATGGTTTGCATGTTTCTTCCACTCGCAGTGTTGCTGTTTGTCACCCACCAACATGCCGCCCACGCTCTCATGCCCTACCGCTCCATCTGGGACATCATGCAACCAGCCATCATGCAAGGCGGGTTCTCGGAGGATCCATTCAGAATCCTAGAGCAGAGTCCCCTAGGCGTTCCAAGATCAGCGGTGGACACAGTGGCAATAGCCCGCACGGACTGGAAGGAGACAAGCGGGGAGCACATGATATGGATGGACATCCCCGGCGTGAAGAAGGAGGATTTAAAGATCGAGGTGGAGGAGAACAGCGTGCTGAGAATCAGCGGAGAGATGAAGGGAGAGAGCGAGGTGGAAGGGGAGAGATGGCACCGGGCGGAGAGGAGTTCGTCGGGGAGGTTCTGGAGGCAGTTCAGGCTGCCGGGGAACGCCAACATGGAAGGGATCAAAGCCCACTTGGAGAACGGGGTGCTGAAGGTGACGGTGCCGAAGCTGCCGGAGGAGAAGAAGAAGGAGGCGAAGGTGGTTAAGATCGAGGAAGGGAGCATGTCCGGCGGCGAGGATGTGAAGCCTTCCAGAGCTGACGTCTAA

Homology

[Close]

BLAST of CmoCh19G005900 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-35
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL  
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 173 EKKKEAKVVKI 184
           EK K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

[Close]

BLAST of CmoCh19G005900 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-34
Identity = 77/147 (52.38%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVD-TVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVL 112
           DPFR+LEQ P GV +     T++ AR DWKET   H+I +D+PG+KK+D+KIEVEEN VL
Sbjct: 51  DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVL 110

Query: 113 RISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 172
           R+SGE K E + +G+ WHR ER S G+FWRQF+LP N +++ +KA +ENGVL +T+ KL 
Sbjct: 111 RVSGERKKEEDKKGDHWHRVER-SYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLS 170

Query: 173 EEKKKEAKVVKIEEGSMSGGEDVKPSR 199
            +K K  ++V I E      ED KPS+
Sbjct: 171 HDKIKGPRMVSIVE------EDDKPSK 190

[Close]

BLAST of CmoCh19G005900 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.5e-33
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVD-TVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVL 112
           DPFR+LE  P GV +      ++ AR DWKET   H+I +D+PG+K+E++K+EVEEN VL
Sbjct: 43  DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVL 102

Query: 113 RISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLP 172
           R+SGE K E E +G+ WHR ER S G+FWRQFRLP N +++ +KA LENGVL +T+ KL 
Sbjct: 103 RVSGERKKEEEKKGDHWHRVER-SYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLS 162

Query: 173 EEKKKEAKVVKI 184
             K K  +VV I
Sbjct: 163 PGKIKGPRVVSI 173

[Close]

BLAST of CmoCh19G005900 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 84/188 (44.68%), Postives = 115/188 (61.17%), Query Frame = 1


Query: 12  MFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGF--SEDPFRILEQSPLGVPRSA 71
           M   +AV+L  T   A  AL+P+         A+ + G   + DPFRILE  P G  R  
Sbjct: 12  MLACIAVVLASTA--ADGALLPWFGGGGARDEAVPELGLLAAADPFRILEHVPFGFDRDD 71

Query: 72  VDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVE----G 131
           V  +++AR DW+ET   H + +D+PG++KEDL++EVE+N VLRISGE + E   E    G
Sbjct: 72  VAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGG 131

Query: 132 ERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEE 191
           + WHR ER S GRFWRQ RLP NA+++ I A L+NGVL V   KL  ++ K  +VV I  
Sbjct: 132 DHWHREER-SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKLAPDQIKGPRVVGI-- 191

Query: 192 GSMSGGED 194
            + +GG+D
Sbjct: 192 -ASAGGDD 193

[Close]

BLAST of CmoCh19G005900 vs. Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 89/214 (41.59%), Postives = 132/214 (61.68%), Query Frame = 1


Query: 7   RSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSPL--- 66
           R ++ M   +A ++ +    AA AL+PY             G   +DPFR+LEQSPL   
Sbjct: 7   REVLGMVAAVAAMVVMMAPPAA-ALVPYG-----------YGYMLDDPFRVLEQSPLRPA 66

Query: 67  -GVPRSAVD----TVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENS-VLRISGEM 126
            GV  +A       VA+AR DWKET   H++ +D+PGV++ D+++EV+E S VLR+SGE 
Sbjct: 67  GGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGER 126

Query: 127 KG-------ESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKL 186
           +        E E +G RWHRAER++ GRFWR+FR+P  A++  + A L++GVL VTVPK+
Sbjct: 127 RRAGAAEEEEGERDGVRWHRAERAA-GRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKV 186

Query: 187 PEEKKKEAKVVKIEEGSMSG---GEDVKPSRADV 202
           P  + +E +VV I +G+ +G    E VK S+A++
Sbjct: 187 PGHRGREPRVVAI-DGAGAGDMEAEVVKASKAEM 206

[Close]

BLAST of CmoCh19G005900 vs. TrEMBL
Match: A0A0A0K2J0_CUCSA (Heat-shock protein OS=Cucumis sativus GN=Csa_7G072770 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.6e-78
Identity = 154/198 (77.78%), Postives = 173/198 (87.37%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR+ + + L LA   F T Q  A+ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPG+K+EDLKIEVEEN VLRISGEMKGE+E
Sbjct: 64  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           V GERWHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDVKPSRA 200
           KIEEG+ SGGED+K ++A
Sbjct: 184 KIEEGAKSGGEDLKATKA 195

[Close]

BLAST of CmoCh19G005900 vs. TrEMBL
Match: H6TB39_CITLA (HSP22.9 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-76
Identity = 148/201 (73.63%), Postives = 176/201 (87.56%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFV-THQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQS 62
           MGLPR+++ + LPL  LLF+      A+ALMPYRS+WD+MQP    GG++EDPFRILEQS
Sbjct: 4   MGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQP----GGYTEDPFRILEQS 63

Query: 63  PLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGES 122
           PL VP+SAVDT+A+AR DWKET+ EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE+
Sbjct: 64  PLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEA 123

Query: 123 EVEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 182
           EVEGERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGVLKV VPKLP+EKK+EAKV
Sbjct: 124 EVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKV 183

Query: 183 VKIEEGSMSGGEDVKPSRADV 202
           VKIEE   +GGED+KP++A++
Sbjct: 184 VKIEEEGKAGGEDLKPTKAEM 200

[Close]

BLAST of CmoCh19G005900 vs. TrEMBL
Match: K4BKP5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.7e-52
Identity = 115/194 (59.28%), Postives = 148/194 (76.29%), Query Frame = 1


Query: 9   MVCMFLPLAVLLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPR 68
           M  + L + V+LF +      ALMPY R  WDI  P        EDPFRILEQ+PL +P+
Sbjct: 9   MSFLVLAMVVVLFPSQ---IKALMPYTRPFWDIAFPP-------EDPFRILEQTPLTIPK 68

Query: 69  SAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGER 128
             V+++A+ R+DWKET+ EH+I +DIPG+KKED+KIEVEEN VLR+SGE K E E+EGE+
Sbjct: 69  G-VESIALTRSDWKETATEHVITLDIPGMKKEDVKIEVEENRVLRVSGERKTEEEIEGEK 128

Query: 129 WHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEEGS 188
           WHRAER + G+FWRQFRLPGNA++E IKAHLENGVLK+TVPKL EEKKK++KV+ I E  
Sbjct: 129 WHRAER-TCGKFWRQFRLPGNADLEHIKAHLENGVLKITVPKLAEEKKKQSKVISIAEA- 188

Query: 189 MSGGEDVKPSRADV 202
             GGED+K ++A++
Sbjct: 189 -VGGEDIKANKAEM 188

[Close]

BLAST of CmoCh19G005900 vs. TrEMBL
Match: M1C9Q4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024476 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.2e-51
Identity = 114/191 (59.69%), Postives = 148/191 (77.49%), Query Frame = 1


Query: 13  FLPLAV-LLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPRSAV 72
           FL LA+ ++F+  Q    ALMPY R  WDI  P       +EDPFRILEQ+PL +P+  V
Sbjct: 11  FLVLAMAVVFLPSQ--IQALMPYTRPFWDIAFP-------TEDPFRILEQTPLTIPKG-V 70

Query: 73  DTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGERWHR 132
           +++A+ R+DWKET+ EH+I +DIPG+KKED+KIEVEEN VLR+SGE K E E+EGE+WHR
Sbjct: 71  ESIALTRSDWKETATEHVITLDIPGMKKEDIKIEVEENRVLRVSGERKTEEEIEGEKWHR 130

Query: 133 AERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKI-EEGSMS 192
           AER + G+FWRQFRLPGNA++E IK +LENGVLK+TVPKL EEKKK++KV+ I EE    
Sbjct: 131 AER-TCGKFWRQFRLPGNADLEHIKVNLENGVLKITVPKLAEEKKKQSKVISIAEERKAV 190

Query: 193 GGEDVKPSRAD 201
           GGED+  ++A+
Sbjct: 191 GGEDITANKAE 190

[Close]

BLAST of CmoCh19G005900 vs. TrEMBL
Match: A0A068TQM6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015069001 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.1e-50
Identity = 112/195 (57.44%), Postives = 145/195 (74.36%), Query Frame = 1


Query: 12  MFLPLAVLLFVTH--QHAAHALMPY--RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPR 71
           +F+ L VL  V       A ALMPY  RS WD+M P       +EDPFRILE SPL VP+
Sbjct: 8   VFMSLLVLAAVAALLPEQAEALMPYSPRSFWDMMLP-------NEDPFRILEHSPLTVPK 67

Query: 72  SAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGER 131
             V+T+A+AR DWKET+ EH+I +D+PG+KKE++KIEVE+N VLR+SGE K E EVEG++
Sbjct: 68  G-VETLALARADWKETAKEHVISLDVPGIKKEEVKIEVEDNRVLRVSGERKTEEEVEGDK 127

Query: 132 WHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKI-EEG 191
           WHRAER + G+FWRQFRLPGNA+++ ++AHLENGVL++ VPKL EEKKK+ KV+ I EE 
Sbjct: 128 WHRAER-TVGKFWRQFRLPGNADLDKVQAHLENGVLEIVVPKLAEEKKKQPKVINIAEEA 187

Query: 192 SMSGGEDVKPSRADV 202
             + G DVK  R ++
Sbjct: 188 GSNTGVDVKAKRDEM 193

[Close]

BLAST of CmoCh19G005900 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-36
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ILE+ PLG+ R     ++ AR DWKET+  H I +DIPG+KK+++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           +SGE K E E +G++WHR ER S G+FWRQF+LP N +ME +KA LENGVL + + KL  
Sbjct: 108 VSGERKREEEKKGDQWHRVER-SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 167

Query: 173 EKKKEAKVVKI 184
           EK K  +VV I
Sbjct: 168 EKVKGPRVVNI 177

[Close]

BLAST of CmoCh19G005900 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ L+      P S+   +A AR DWKET+  H+   D+PG+KKE++K+E+E++SVL+
Sbjct: 28  DPFKELQ-----FPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLK 87

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           ISGE   E E + + WHR ERSS G F R+FRLP N  M+ +KA +ENGVL VTVPK+ E
Sbjct: 88  ISGERHVEKEEKQDTWHRVERSSGG-FSRKFRLPENVKMDQVKASMENGVLTVTVPKV-E 147

Query: 173 EKKKEAKVVKIE 185
             KK+A+V  I+
Sbjct: 148 TNKKKAQVKSID 152

[Close]

BLAST of CmoCh19G005900 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 1


Query: 50  FSEDPFRILEQ--SPLGVPRS-AVDTVAI--ARTDWKETSGEHMIWMDIPGVKKEDLKIE 109
           FS D F   E   +P G+  + A+D  A   A+ DW+ET   H+   D+PG++KE++K+E
Sbjct: 19  FSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVE 78

Query: 110 VEENSVLRISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLK 169
           VE+ ++L+ISGE   E+E + ++WHR ER SSG+F R+FRLP NA ME IKA +ENGVL 
Sbjct: 79  VEDGNILQISGERSNENEEKNDKWHRVER-SSGKFTRRFRLPENAKMEEIKASMENGVLS 138

Query: 170 VTVPKLPEEKKKEAKVVKI 184
           VTVPK+P EKK E K + I
Sbjct: 139 VTVPKVP-EKKPEVKSIDI 155

[Close]

BLAST of CmoCh19G005900 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 8.8e-28
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1


Query: 53  DPFRILEQSPLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLR 112
           DPF+ L  S L    SA+     AR DW+ET   H+   D+PG+KKE++K+E+EE+SVL+
Sbjct: 26  DPFKELTSSSLSRENSAIVN---ARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLK 85

Query: 113 ISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPE 172
           ISGE   E E + + WHR ER SSG+F R+FRLP N  M+ +KA +ENGVL VTVPK  E
Sbjct: 86  ISGERHVEKEDKNDTWHRVER-SSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPK-AE 145

Query: 173 EKKKEAKVVKI 184
            KK + K ++I
Sbjct: 146 TKKADVKSIQI 151

[Close]

BLAST of CmoCh19G005900 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 53  DPFR--ILEQSPLGVPRSAVDTVAI--ARTDWKETSGEHMIWMDIPGVKKEDLKIEVEEN 112
           DPF       S L    +A D  A   AR DWKET   H+   D+PG+KKE++K+EVE+ 
Sbjct: 25  DPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDK 84

Query: 113 SVLRISGEMKGESEVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVP 172
           +VL+ISGE   E+E + ++WHR ER +SG+F R+FRLP NA ME +KA +ENGVL V VP
Sbjct: 85  NVLQISGERSKENEEKNDKWHRVER-ASGKFMRRFRLPENAKMEEVKATMENGVLTVVVP 144

Query: 173 KLPEEKKKEAKVVKI 184
           K P EKK + K + I
Sbjct: 145 KAP-EKKPQVKSIDI 157

[Close]

BLAST of CmoCh19G005900 vs. NCBI nr
Match: gi|449438367|ref|XP_004136960.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 5.1e-78
Identity = 154/198 (77.78%), Postives = 173/198 (87.37%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR+ + + L LA   F T Q  A+ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFFATQQ--ANALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPG+K+EDLKIEVEEN VLRISGEMKGE+E
Sbjct: 64  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           V GERWHRAER SSSG+FWRQFRLPGNA+MEGIKAHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDVKPSRA 200
           KIEEG+ SGGED+K ++A
Sbjct: 184 KIEEGAKSGGEDLKATKA 195

[Close]

BLAST of CmoCh19G005900 vs. NCBI nr
Match: gi|659109986|ref|XP_008454987.1| (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 4.3e-77
Identity = 152/200 (76.00%), Postives = 172/200 (86.00%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQSP 62
           MGLPR+ + + L LA       Q   +ALMPYRSIWDIMQP    GG+SEDPFRILEQSP
Sbjct: 4   MGLPRNSLFLILGLAFYFLAAQQ--VNALMPYRSIWDIMQP----GGYSEDPFRILEQSP 63

Query: 63  LGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESE 122
           L VP+SAVDT+A+AR DWKET  EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE E
Sbjct: 64  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGE 123

Query: 123 VEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           VEGERWHRAER SSSGRFWRQFR+PGNA+MEGI+AHLENGVLKV VPKLP+EKKKEAKVV
Sbjct: 124 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 183

Query: 183 KIEEGSMSGGEDVKPSRADV 202
           KIEEG+ SGGED+K ++A++
Sbjct: 184 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of CmoCh19G005900 vs. NCBI nr
Match: gi|315932712|gb|ADU55786.1| (HSP22.9 [Citrullus lanatus])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 148/201 (73.63%), Postives = 176/201 (87.56%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFV-THQHAAHALMPYRSIWDIMQPAIMQGGFSEDPFRILEQS 62
           MGLPR+++ + LPL  LLF+      A+ALMPYRS+WD+MQP    GG++EDPFRILEQS
Sbjct: 4   MGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQP----GGYTEDPFRILEQS 63

Query: 63  PLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGES 122
           PL VP+SAVDT+A+AR DWKET+ EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE+
Sbjct: 64  PLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEA 123

Query: 123 EVEGERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKV 182
           EVEGERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGVLKV VPKLP+EKK+EAKV
Sbjct: 124 EVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKV 183

Query: 183 VKIEEGSMSGGEDVKPSRADV 202
           VKIEE   +GGED+KP++A++
Sbjct: 184 VKIEEEGKAGGEDLKPTKAEM 200

[Close]

BLAST of CmoCh19G005900 vs. NCBI nr
Match: gi|970016207|ref|XP_015069201.1| (PREDICTED: 22.0 kDa class IV heat shock protein-like [Solanum pennellii])

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-52
Identity = 118/201 (58.71%), Postives = 150/201 (74.63%), Query Frame = 1


Query: 3   MGLPRSMVCMFLPLAVLLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQS 62
           M   R     FL LA ++FV       ALMPY R  WDI  P        EDPFRILEQ+
Sbjct: 1   MAKTRVSFMKFLVLA-MVFVLFPSQIKALMPYTRPFWDIAFPP-------EDPFRILEQT 60

Query: 63  PLGVPRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGES 122
           PL +P+  V+++A+ R+DWKET+ EH+I +DIPG+KKED+KIEVEEN VLR+SGE K E 
Sbjct: 61  PLTIPKG-VESIALTRSDWKETATEHVITLDIPGMKKEDIKIEVEENRVLRVSGERKTEQ 120

Query: 123 EVEGERWHRAERSSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVV 182
           E+EGE+WHRAER + G+FWRQFRLPGNA++E IKA+LENGVLK+TVPKL EEKKK++KV+
Sbjct: 121 EIEGEKWHRAER-TCGKFWRQFRLPGNADLEHIKANLENGVLKITVPKLAEEKKKQSKVI 180

Query: 183 KI-EEGSMSGGEDVKPSRADV 202
            I EE    GGED+K ++A++
Sbjct: 181 SIAEERKAVGGEDIKANKAEM 191

[Close]

BLAST of CmoCh19G005900 vs. NCBI nr
Match: gi|697170535|ref|XP_009594185.1| (PREDICTED: 22.0 kDa heat shock protein-like [Nicotiana tomentosiformis])

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-52
Identity = 112/185 (60.54%), Postives = 141/185 (76.22%), Query Frame = 1


Query: 18  VLLFVTHQHAAHALMPY-RSIWDIMQPAIMQGGFSEDPFRILEQSPLGVPRSAVDTVAIA 77
           V+ F+  Q    A MPY R  WD+M P        EDPF+ILEQ+PL +P+    T+A+A
Sbjct: 12  VIAFLPSQ--TQASMPYTRPFWDLMFP-------QEDPFKILEQTPLAIPKGIDQTIALA 71

Query: 78  RTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGERWHRAERSSS 137
           R+DWKET+ EH+I +DIPG+KKED+KIEVEEN VLRISGE K E EVEGE+WHRAER +S
Sbjct: 72  RSDWKETAKEHIISLDIPGMKKEDIKIEVEENRVLRISGERKTEEEVEGEKWHRAER-TS 131

Query: 138 GRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEE--GSMSGGEDV 197
           G+FWRQFRLP NA++E IKAHLENGVL +TVPKL EE+KK+ KV+ I E   + +GGED+
Sbjct: 132 GKFWRQFRLPKNADLEQIKAHLENGVLNITVPKLAEEEKKQPKVISISEQRNAAAGGEDI 186

Query: 198 KPSRA 200
           K ++A
Sbjct: 192 KATKA 186

The following BLAST results are available for this feature:

BLAST of CmoCh19G005900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP22_ARATH	1.8e-35	57.25	22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1	[more]
HSP41_PEA	3.5e-34	52.38	22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1	[more]
HSP41_SOYBN	6.5e-33	53.79	22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1	[more]
HS232_ORYSJ	1.0e-30	44.68	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2	[more]
HS219_ORYSJ	3.3e-29	41.59	21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1	[more]

BLAST of CmoCh19G005900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2J0_CUCSA	3.6e-78	77.78	Heat-shock protein OS=Cucumis sativus GN=Csa_7G072770 PE=3 SV=1	[more]
H6TB39_CITLA	1.1e-76	73.63	HSP22.9 OS=Citrullus lanatus PE=2 SV=1	[more]
K4BKP5_SOLLC	5.7e-52	59.28	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]
M1C9Q4_SOLTU	8.2e-51	59.69	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024476 PE=3 SV=1	[more]
A0A068TQM6_COFCA	9.1e-50	57.44	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00015069001 PE=3 SV=1	[more]

BLAST of CmoCh19G005900 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10250.1	1.0e-36	57.25	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.8e-28	50.76	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.8e-28	50.36	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	8.8e-28	51.15	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	1.5e-27	50.37	heat shock protein 18.2	[more]

BLAST of CmoCh19G005900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438367\|ref\|XP_004136960.1\|	5.1e-78	77.78	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis sativus]	[more]
gi\|659109986\|ref\|XP_008454987.1\|	4.3e-77	76.00	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo]	[more]
gi\|315932712\|gb\|ADU55786.1\|	1.6e-76	73.63	HSP22.9 [Citrullus lanatus]	[more]
gi\|970016207\|ref\|XP_015069201.1\|	2.2e-52	58.71	PREDICTED: 22.0 kDa class IV heat shock protein-like [Solanum pennellii]	[more]
gi\|697170535\|ref\|XP_009594185.1\|	8.2e-52	60.54	PREDICTED: 22.0 kDa heat shock protein-like [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005900.1	CmoCh19G005900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 79..183 score: 3.3
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 79..169 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 66..183 score: 3.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 65..180 score: 1.0
None	No IPR available	PANTHER	PTHR11527:SF170	SUBFAMILY NOT NAMED	coord: 8..191 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005900	Cucsa.219490	Cucumber (Gy14) v1	cgycmoB0631
CmoCh19G005900	CmaCh19G005760	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005900	Cla016060	Watermelon (97103) v1	cmowmB496
CmoCh19G005900	Csa7G072770	Cucumber (Chinese Long) v2	cmocuB527
CmoCh19G005900	MELO3C018485	Melon (DHL92) v3.5.1	cmomeB450
CmoCh19G005900	ClCG02G006430	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005900	CSPI07G07260	Wild cucumber (PI 183967)	cmocpiB533
CmoCh19G005900	Lsi03G005410	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005900	Cp4.1LG15g04660	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005900	MELO3C018485.2	Melon (DHL92) v3.6.1	cmomedB519
CmoCh19G005900	CsaV3_7G008210	Cucumber (Chinese Long) v3	cmocucB0631
CmoCh19G005900	Cla97C02G033390	Watermelon (97103) v2	cmowmbB512
CmoCh19G005900	Bhi05G000978	Wax gourd	cmowgoB0657
CmoCh19G005900	Carg16357	Silver-seed gourd	carcmoB0615

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005900	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005900	Melon (DHL92) v3.6.1	cmomedB526
CmoCh19G005900	Melon (DHL92) v3.6.1	cmomedB549
CmoCh19G005900	Melon (DHL92) v3.6.1	cmomedB553
CmoCh19G005900	Silver-seed gourd	carcmoB0268
CmoCh19G005900	Silver-seed gourd	carcmoB0512
CmoCh19G005900	Cucumber (Chinese Long) v3	cmocucB0602
CmoCh19G005900	Cucumber (Chinese Long) v3	cmocucB0611
CmoCh19G005900	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005900	Watermelon (97103) v2	cmowmbB502
CmoCh19G005900	Watermelon (97103) v2	cmowmbB516
CmoCh19G005900	Watermelon (97103) v2	cmowmbB519
CmoCh19G005900	Wax gourd	cmowgoB0640
CmoCh19G005900	Wax gourd	cmowgoB0670
CmoCh19G005900	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005900	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005900	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005900	Cucurbita maxima (Rimu)	cmacmoB718
CmoCh19G005900	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005900	Cucurbita maxima (Rimu)	cmacmoB329
CmoCh19G005900	Wild cucumber (PI 183967)	cmocpiB510
CmoCh19G005900	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005900	Cucumber (Chinese Long) v2	cmocuB504
CmoCh19G005900	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005900	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005900	Melon (DHL92) v3.5.1	cmomeB477
CmoCh19G005900	Watermelon (Charleston Gray)	cmowcgB464
CmoCh19G005900	Watermelon (97103) v1	cmowmB490
CmoCh19G005900	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G005900	Bottle gourd (USVL1VR-Ls)	cmolsiB460
CmoCh19G005900	Bottle gourd (USVL1VR-Ls)	cmolsiB469
CmoCh19G005900	Bottle gourd (USVL1VR-Ls)	cmolsiB478
CmoCh19G005900	Bottle gourd (USVL1VR-Ls)	cmolsiB482
CmoCh19G005900	Cucumber (Gy14) v2	cgybcmoB352
CmoCh19G005900	Cucumber (Gy14) v2	cgybcmoB492
CmoCh19G005900	Cucumber (Gy14) v2	cgybcmoB928