Lsi04G014020 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G014020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	17.9 kDa class II heat shock protein
Location	chr04 : 21787742 .. 21788215 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTAGCCAAAATGGGACTCGACCCAATATTCCTGAACACCCTCCACGACCTTCTGGACTTCACGGACGACCCAGGACAGAGCAGCCACCACGCACCGTCACGTGCCTACGTGAGGGACGCAAAGGCGATGGCGGCGACTCCGGCGGACGTGGTGGAATATCCAAACTCATACCAATTCACCATCGACATGCCTGGCCTGAAACCCGACCAAATAAAGGTGAAAATAGAGGACAACCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTAAAGGAGGGGAAATTTGTGAGAATGGAGAGGAGGCTCGGAAAATACTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCCGAGAAAGTGTCGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACCGTGGAGAAGAAGCCGCCGCCGGAGCCCAAAAAGGCTAAGAATATTGAGGTTCATGTGGCGTGA

mRNA sequence

ATGGAGGTAGCCAAAATGGGACTCGACCCAATATTCCTGAACACCCTCCACGACCTTCTGGACTTCACGGACGACCCAGGACAGAGCAGCCACCACGCACCGTCACGTGCCTACGTGAGGGACGCAAAGGCGATGGCGGCGACTCCGGCGGACGTGGTGGAATATCCAAACTCATACCAATTCACCATCGACATGCCTGGCCTGAAACCCGACCAAATAAAGGTGAAAATAGAGGACAACCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTAAAGGAGGGGAAATTTGTGAGAATGGAGAGGAGGCTCGGAAAATACTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCCGAGAAAGTGTCGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACCGTGGAGAAGAAGCCGCCGCCGGAGCCCAAAAAGGCTAAGAATATTGAGGTTCATGTGGCGTGA

Coding sequence (CDS)

ATGGAGGTAGCCAAAATGGGACTCGACCCAATATTCCTGAACACCCTCCACGACCTTCTGGACTTCACGGACGACCCAGGACAGAGCAGCCACCACGCACCGTCACGTGCCTACGTGAGGGACGCAAAGGCGATGGCGGCGACTCCGGCGGACGTGGTGGAATATCCAAACTCATACCAATTCACCATCGACATGCCTGGCCTGAAACCCGACCAAATAAAGGTGAAAATAGAGGACAACCAGTTGGTTGTGAGCGGCGAGAGGAAGAGGGAAAGTGAAAAAGTAAAGGAGGGGAAATTTGTGAGAATGGAGAGGAGGCTCGGAAAATACTTGAAGAAATTTGACCTGCCGGAAACTGCCGACGCCGAGAAAGTGTCGGCGGCGTACCAGGACGGAGTGCTGTCGGTCACCGTGGAGAAGAAGCCGCCGCCGGAGCCCAAAAAGGCTAAGAATATTGAGGTTCATGTGGCGTGA

Protein sequence

MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTIDMPGLKPDQIKVKIEDNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA

Homology

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BLAST of Lsi04G014020 vs. Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-44
Identity = 96/160 (60.00%), Postives = 120/160 (75.00%), Query Frame = 1


Query: 3   VAKMGLDPIFLNTLHDLLDFTDD---PGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSY 62
           ++  GL+P  L+T+ D+LDF DD    G++    P RAYVRDAKAMAATPADV EYPNSY
Sbjct: 8   LSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSY 67

Query: 63  QFTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEG-KFVRMERRLGKYLKKFDLP 122
            F  DMPG+K  +IKV++ED N LVVSGER    +  K+G K++RMERR+GK+++KF LP
Sbjct: 68  VFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLP 127

Query: 123 ETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           E A+ E ++A YQDGVL VTVEK PPPEPKK K +EV VA
Sbjct: 128 ENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167

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BLAST of Lsi04G014020 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 95/154 (61.69%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 6   MGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTIDM 65
           M LD    NTLH ++D TDD  + + +AP+R YVRDAKAMAATPADV E+PNSY F +DM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKPDQIKVKIED-NQLVVSGERKRESEKVKEG-KFVRMERRLGKYLKKFDLPETADAE 125
           PG+K   IKV++ED N L++SGERKRE E  KEG K+++MERR+GK ++KF LPE A+ E
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEE--KEGVKYLKMERRIGKLMRKFVLPENANIE 120

Query: 126 KVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
            +SA  QDGVL+VTV K PPPEPKK K I+V VA
Sbjct: 121 AISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152

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BLAST of Lsi04G014020 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43
Identity = 96/160 (60.00%), Postives = 124/160 (77.50%), Query Frame = 1


Query: 1   MEVAKMGLD--PIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNS 60
           M++  +G+D  P+F +TLH +++     G+ S +APS+ YVRDAKAMAATPADV EYPNS
Sbjct: 1   MDLRLLGIDNTPLF-HTLHHMMEAA---GEDSVNAPSKIYVRDAKAMAATPADVKEYPNS 60

Query: 61  YQFTIDMPGLKPDQIKVKI-EDNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLP 120
           Y F +DMPGLK   IKV++ EDN L++SGERKRE EK +  KF+RMERR+GK+++KF LP
Sbjct: 61  YVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEK-EGAKFIRMERRVGKFMRKFSLP 120

Query: 121 ETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           E A+ + +SA  QDGVL+VTV+K PPPEPKK K IEV VA
Sbjct: 121 ENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155

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BLAST of Lsi04G014020 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43
Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 1


Query: 6   MGLDPIFLNTLHDLLDFTDDP---GQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFT 65
           MG DP+  N LH +L+ TDD     +S++  PSRAYVRDA+AMAATPADV E PNSY F 
Sbjct: 7   MGFDPLLRN-LHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFI 66

Query: 66  IDMPGLKPDQIKVKIE-DNQLVVSGERKRESEKVKEG-KFVRMERRLGKYLKKFDLPETA 125
           +DMPGLK   IKV++E DN LV+SG+R RE E  KEG K+VRMERR+GK++KKF LPE A
Sbjct: 67  VDMPGLKSGDIKVQVERDNVLVISGKRNREEE--KEGVKYVRMERRMGKFMKKFALPEDA 126

Query: 126 DAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           + +K+SA  QDGVL+VTVEK PPPEPKK K I+V VA
Sbjct: 127 NTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160

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BLAST of Lsi04G014020 vs. Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.0e-42
Identity = 89/154 (57.79%), Postives = 121/154 (78.57%), Query Frame = 1


Query: 6   MGLDPIFLNTLHDLLDFTDDPG-QSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTID 65
           +G  PI ++ L D+L+  +D   + + + PSR Y+RDAKAMAATPADV+E+PN+Y F +D
Sbjct: 3   LGRFPI-ISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVD 62

Query: 66  MPGLKPDQIKVKIE-DNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADAE 125
           MPG+K D+IKV++E DN LVVSGER+RE+++ +  K+VRMERR+GK+++KF LPE AD +
Sbjct: 63  MPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLD 122

Query: 126 KVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           K+SA   DGVL VTV+K PPPEPKK K I+V VA
Sbjct: 123 KISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

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BLAST of Lsi04G014020 vs. TrEMBL
Match: A0A0A0L5D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646350 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.3e-72
Identity = 142/158 (89.87%), Postives = 150/158 (94.94%), Query Frame = 1


Query: 1   MEVAKM-GLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSY 60
           MEVAKM G DP+FLN LHDLLDF+D+PGQ SHHAPSRAY+RDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLKPDQIKVKIEDNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL  DQIKVK+ED QLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           ADA+KVSAAY+DGVLSVTVEKKPPPEPKKAK+IEV VA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

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BLAST of Lsi04G014020 vs. TrEMBL
Match: A0A059CLA5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00678 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 114/168 (67.86%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQ 60
           M++  MG DP  L+TLH+LLD +D+P   SHHAPSRA++RD KAMAATPADV EYPNSY 
Sbjct: 1   MDLRDMGFDPTVLDTLHELLDLSDEPDAKSHHAPSRAFLRDKKAMAATPADVKEYPNSYV 60

Query: 61  FTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEK----VKEG------KFVRMERRLGK 120
           F +DMPGLKPDQIKV++ED N LVVSGERKRE EK     K+G      ++V+MERRLGK
Sbjct: 61  FVLDMPGLKPDQIKVQVEDGNMLVVSGERKREKEKDLKDQKDGAGGGLLRYVKMERRLGK 120

Query: 121 YLKKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           +LKKF LPE AD EK+SA+YQDGVL+VTVEK+PPPEPKK K IEV +A
Sbjct: 121 FLKKFVLPENADPEKISASYQDGVLTVTVEKRPPPEPKKPKTIEVQIA 168

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BLAST of Lsi04G014020 vs. TrEMBL
Match: A0A061GKC6_THECC (Heat-shock protein, putative OS=Theobroma cacao GN=TCM_037346 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50
Identity = 107/158 (67.72%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 1   MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQ 60
           M+   MG DP  ++TLH+LLDF DD  +S  H PSRAY+RDAKAMAATPADV + PN+Y 
Sbjct: 1   MDWRVMGFDPSVIDTLHELLDFPDDADKSQPH-PSRAYIRDAKAMAATPADVKDCPNAYV 60

Query: 61  FTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
             IDMPGLK DQ+KV++E+ N LVVSGERKRE EK +  KF++MERRLGKYLKKF LPE 
Sbjct: 61  VVIDMPGLKQDQLKVQVEEGNFLVVSGERKREKEKDQGVKFIKMERRLGKYLKKFQLPEM 120

Query: 121 ADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           AD EK+SA+YQDGVL+VTVEKKPPPEPKK + +EV V+
Sbjct: 121 ADTEKISASYQDGVLTVTVEKKPPPEPKKPRTVEVQVS 157

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BLAST of Lsi04G014020 vs. TrEMBL
Match: W9QXD5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003776 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-50
Identity = 110/159 (69.18%), Postives = 129/159 (81.13%), Query Frame = 1


Query: 6   MGLDPIFLN--TLHDLLDFTDD----PGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSY 65
           MGLDP  L   TLHD+LD++++    PG  +HHAPSRAYVRDAKAMAATPADV + PN+Y
Sbjct: 1   MGLDPAQLIEFTLHDILDYSEETSGGPGGEAHHAPSRAYVRDAKAMAATPADVKDTPNAY 60

Query: 66  QFTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPE 125
            F IDMPGLK DQIKV +E+ N LVVSGERKRE EK +  K++RMERRLGKYLKKF LPE
Sbjct: 61  VFVIDMPGLKQDQIKVHVEEENVLVVSGERKREREKDQGVKYLRMERRLGKYLKKFVLPE 120

Query: 126 TADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
            AD +K+SA+YQDGVL+VT++KKPPPEPKK K  EV VA
Sbjct: 121 NADTDKISASYQDGVLTVTIQKKPPPEPKKPKTSEVQVA 159

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BLAST of Lsi04G014020 vs. TrEMBL
Match: B9RQT8_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0706500 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-49
Identity = 105/150 (70.00%), Postives = 122/150 (81.33%), Query Frame = 1


Query: 8   LDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTIDMPG 67
           LDP  L+ LH++L+ +D+  + SHHAPSR YVRD KAMAATPAD  E PN+Y F IDMPG
Sbjct: 10  LDPGILDVLHEILEVSDET-EKSHHAPSRTYVRDTKAMAATPADAKELPNAYMFVIDMPG 69

Query: 68  LKPDQIKVKIED-NQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADAEKVS 127
           LK DQIKV +ED N LVVSGERKRE EK +  +++RMERRLGKYLKKF LPE AD+EK+S
Sbjct: 70  LKADQIKVHVEDGNMLVVSGERKREKEKDQGVRYIRMERRLGKYLKKFVLPENADSEKIS 129

Query: 128 AAYQDGVLSVTVEKKPPPEPKKAKNIEVHV 157
           A YQDGVL+VTVEKKPPPEPKK K +EV V
Sbjct: 130 ATYQDGVLTVTVEKKPPPEPKKPKTVEVQV 158

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BLAST of Lsi04G014020 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 171.8 bits (434), Expect = 3.4e-43
Identity = 89/154 (57.79%), Postives = 121/154 (78.57%), Query Frame = 1


Query: 6   MGLDPIFLNTLHDLLDFTDDPG-QSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTID 65
           +G  PI ++ L D+L+  +D   + + + PSR Y+RDAKAMAATPADV+E+PN+Y F +D
Sbjct: 3   LGRFPI-ISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVD 62

Query: 66  MPGLKPDQIKVKIE-DNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADAE 125
           MPG+K D+IKV++E DN LVVSGER+RE+++ +  K+VRMERR+GK+++KF LPE AD +
Sbjct: 63  MPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLD 122

Query: 126 KVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           K+SA   DGVL VTV+K PPPEPKK K I+V VA
Sbjct: 123 KISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

[Close]

BLAST of Lsi04G014020 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-43
Identity = 87/154 (56.49%), Postives = 122/154 (79.22%), Query Frame = 1


Query: 5   KMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQFTID 64
           + G  PIF + L D+L+  ++  + + + PSRAY+RDAKAMAATPADV+E+P++Y F +D
Sbjct: 4   EFGRFPIF-SILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVD 63

Query: 65  MPGLKPDQIKVKIE-DNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETADAE 124
           MPG+K D+I+V+IE +N LVVSG+R+R++++ +  KFVRMERR+GK+++KF LP+ AD E
Sbjct: 64  MPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLE 123

Query: 125 KVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           K+SAA  DGVL VT+ K PPPEPKK K I+V VA
Sbjct: 124 KISAACNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

[Close]

BLAST of Lsi04G014020 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-19
Identity = 50/114 (43.86%), Postives = 79/114 (69.30%), Query Frame = 1


Query: 49  PADVVEYPNSYQFTIDMPGLKPDQIKVKIEDNQLVV---SGERKRESEKVKEG-KFVRME 108
           P D++E P  Y F +D+PG+    I+V +E+ + +V   +G+RKR+ ++ +EG K++R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 109 RRLGKYL-KKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           RRL + L KKF LPE AD   V+A YQ+GVL+V + KK PP+P K K +++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVI-KKLPPQPPKPKTVQIAVS 155

[Close]

BLAST of Lsi04G014020 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 49/116 (42.24%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 40  RDAKAMAATPADVVEYPNSYQFTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEG 99
           RD  A      D  E P ++ F  D+PGLK +++KV++ED N L +SGER +E+E+ K  
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEE-KND 103

Query: 100 KFVRMERRLGKYLKKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEV 155
           K+ R+ER  GK++++F LPE A  E+V A  ++GVL+V V K P  +P + K+I++
Sbjct: 104 KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKP-QVKSIDI 157

[Close]

BLAST of Lsi04G014020 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = 1


Query: 35  SRAYVRDAKAMAATPADVVEYPNSYQFTIDMPGLKPDQIKVKIED-NQLVVSGERKRESE 94
           + A   D  A      D  E P ++ F  D+PGL+ +++KV++ED N L +SGER  E+E
Sbjct: 37  ANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENE 96

Query: 95  KVKEGKFVRMERRLGKYLKKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIE 154
           + K  K+ R+ER  GK+ ++F LPE A  E++ A+ ++GVLSVTV K P  +P + K+I+
Sbjct: 97  E-KNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKP-EVKSID 155

[Close]

BLAST of Lsi04G014020 vs. NCBI nr
Match: gi|659103977|ref|XP_008452768.1| (PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 1.6e-74
Identity = 141/157 (89.81%), Postives = 151/157 (96.18%), Query Frame = 1


Query: 1   MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQ 60
           M+VAKMG DP+FLN LHDLLDF+D+PGQSSHHAPSRAY+RDAKAMAATPADVVEYPNSYQ
Sbjct: 1   MDVAKMGFDPLFLNALHDLLDFSDEPGQSSHHAPSRAYLRDAKAMAATPADVVEYPNSYQ 60

Query: 61  FTIDMPGLKPDQIKVKIEDNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPETA 120
           FTIDMPGLK DQIKVK+ED QLVVSGERKRESEKVKEGKFVRMERRLGKYLKKF+LPETA
Sbjct: 61  FTIDMPGLKSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFELPETA 120

Query: 121 DAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           D +K+SAAYQDGVLSVTVEKKPPPEPKKAK IE+HVA
Sbjct: 121 DTDKISAAYQDGVLSVTVEKKPPPEPKKAKTIEIHVA 157

[Close]

BLAST of Lsi04G014020 vs. NCBI nr
Match: gi|449447157|ref|XP_004141335.1| (PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72
Identity = 142/158 (89.87%), Postives = 150/158 (94.94%), Query Frame = 1


Query: 1   MEVAKM-GLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSY 60
           MEVAKM G DP+FLN LHDLLDF+D+PGQ SHHAPSRAY+RDAKAMAATPADVVEYPNSY
Sbjct: 1   MEVAKMPGFDPLFLNALHDLLDFSDEPGQGSHHAPSRAYLRDAKAMAATPADVVEYPNSY 60

Query: 61  QFTIDMPGLKPDQIKVKIEDNQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
           QFTIDMPGL  DQIKVK+ED QLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET
Sbjct: 61  QFTIDMPGLTSDQIKVKVEDGQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120

Query: 121 ADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           ADA+KVSAAY+DGVLSVTVEKKPPPEPKKAK+IEV VA
Sbjct: 121 ADADKVSAAYRDGVLSVTVEKKPPPEPKKAKSIEVRVA 158

[Close]

BLAST of Lsi04G014020 vs. NCBI nr
Match: gi|702291759|ref|XP_010047373.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Eucalyptus grandis])

HSP 1 Score: 219.9 bits (559), Expect = 3.1e-54
Identity = 114/168 (67.86%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQ 60
           M++  MG DP  L+TLH+LLD +D+P   SHHAPSRA++RD KAMAATPADV EYPNSY 
Sbjct: 1   MDLRDMGFDPTVLDTLHELLDLSDEPDAKSHHAPSRAFLRDKKAMAATPADVKEYPNSYV 60

Query: 61  FTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEK----VKEG------KFVRMERRLGK 120
           F +DMPGLKPDQIKV++ED N LVVSGERKRE EK     K+G      ++V+MERRLGK
Sbjct: 61  FVLDMPGLKPDQIKVQVEDGNMLVVSGERKREKEKDLKDQKDGAGGGLLRYVKMERRLGK 120

Query: 121 YLKKFDLPETADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           +LKKF LPE AD EK+SA+YQDGVL+VTVEK+PPPEPKK K IEV +A
Sbjct: 121 FLKKFVLPENADPEKISASYQDGVLTVTVEKRPPPEPKKPKTIEVQIA 168

[Close]

BLAST of Lsi04G014020 vs. NCBI nr
Match: gi|590574333|ref|XP_007012372.1| (Heat-shock protein, putative [Theobroma cacao])

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 107/158 (67.72%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 1   MEVAKMGLDPIFLNTLHDLLDFTDDPGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSYQ 60
           M+   MG DP  ++TLH+LLDF DD  +S  H PSRAY+RDAKAMAATPADV + PN+Y 
Sbjct: 1   MDWRVMGFDPSVIDTLHELLDFPDDADKSQPH-PSRAYIRDAKAMAATPADVKDCPNAYV 60

Query: 61  FTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPET 120
             IDMPGLK DQ+KV++E+ N LVVSGERKRE EK +  KF++MERRLGKYLKKF LPE 
Sbjct: 61  VVIDMPGLKQDQLKVQVEEGNFLVVSGERKREKEKDQGVKFIKMERRLGKYLKKFQLPEM 120

Query: 121 ADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
           AD EK+SA+YQDGVL+VTVEKKPPPEPKK + +EV V+
Sbjct: 121 ADTEKISASYQDGVLTVTVEKKPPPEPKKPRTVEVQVS 157

[Close]

BLAST of Lsi04G014020 vs. NCBI nr
Match: gi|703082483|ref|XP_010091963.1| (hypothetical protein L484_003776 [Morus notabilis])

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-49
Identity = 110/159 (69.18%), Postives = 129/159 (81.13%), Query Frame = 1


Query: 6   MGLDPIFLN--TLHDLLDFTDD----PGQSSHHAPSRAYVRDAKAMAATPADVVEYPNSY 65
           MGLDP  L   TLHD+LD++++    PG  +HHAPSRAYVRDAKAMAATPADV + PN+Y
Sbjct: 1   MGLDPAQLIEFTLHDILDYSEETSGGPGGEAHHAPSRAYVRDAKAMAATPADVKDTPNAY 60

Query: 66  QFTIDMPGLKPDQIKVKIED-NQLVVSGERKRESEKVKEGKFVRMERRLGKYLKKFDLPE 125
            F IDMPGLK DQIKV +E+ N LVVSGERKRE EK +  K++RMERRLGKYLKKF LPE
Sbjct: 61  VFVIDMPGLKQDQIKVHVEEENVLVVSGERKREREKDQGVKYLRMERRLGKYLKKFVLPE 120

Query: 126 TADAEKVSAAYQDGVLSVTVEKKPPPEPKKAKNIEVHVA 158
            AD +K+SA+YQDGVL+VT++KKPPPEPKK K  EV VA
Sbjct: 121 NADTDKISASYQDGVLTVTIQKKPPPEPKKPKTSEVQVA 159

The following BLAST results are available for this feature:

BLAST of Lsi04G014020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP22_IPONI	1.3e-44	60.00	18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1	[more]
HSP21_PEA	1.4e-43	61.69	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_SOLPE	1.9e-43	60.00	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_HELAN	1.9e-43	63.69	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]
HS176_ARATH	6.0e-42	57.79	17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=...	[more]

BLAST of Lsi04G014020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D4_CUCSA	2.3e-72	89.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646350 PE=3 SV=1	[more]
A0A059CLA5_EUCGR	2.1e-54	67.86	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00678 PE=3 SV=1	[more]
A0A061GKC6_THECC	2.4e-50	67.72	Heat-shock protein, putative OS=Theobroma cacao GN=TCM_037346 PE=3 SV=1	[more]
W9QXD5_9ROSA	7.1e-50	69.18	Uncharacterized protein OS=Morus notabilis GN=L484_003776 PE=3 SV=1	[more]
B9RQT8_RICCO	2.1e-49	70.00	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0706500 PE=3 SV=1	[more]

BLAST of Lsi04G014020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	3.4e-43	57.79	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	7.5e-43	56.49	heat shock protein 17.6A	[more]
AT1G54050.1	9.9e-19	43.86	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	3.2e-17	42.24	heat shock protein 18.2	[more]
AT1G53540.1	1.6e-16	40.50	HSP20-like chaperones superfamily protein	[more]

BLAST of Lsi04G014020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103977\|ref\|XP_008452768.1\|	1.6e-74	89.81	PREDICTED: 17.3 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|449447157\|ref\|XP_004141335.1\|	3.3e-72	89.87	PREDICTED: 17.9 kDa class II heat shock protein [Cucumis sativus]	[more]
gi\|702291759\|ref\|XP_010047373.1\|	3.1e-54	67.86	PREDICTED: 17.1 kDa class II heat shock protein-like [Eucalyptus grandis]	[more]
gi\|590574333\|ref\|XP_007012372.1\|	3.5e-50	67.72	Heat-shock protein, putative [Theobroma cacao]	[more]
gi\|703082483\|ref\|XP_010091963.1\|	1.0e-49	69.18	hypothetical protein L484_003776 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014020.1	Lsi04G014020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 51..154 score: 2.1
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 51..140 score: 24
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 14..155 score: 6.3
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 29..149 score: 3.49
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 6..157 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G014020	Csa4G646340	Cucumber (Chinese Long) v2	culsiB291
Lsi04G014020	CSPI04G25580	Wild cucumber (PI 183967)	cpilsiB291
Lsi04G014020	Cucsa.299660	Cucumber (Gy14) v1	cgylsiB483
Lsi04G014020	CmaCh09G003550	Cucurbita maxima (Rimu)	cmalsiB024
Lsi04G014020	CmaCh01G017130	Cucurbita maxima (Rimu)	cmalsiB424
Lsi04G014020	CmoCh01G017970	Cucurbita moschata (Rifu)	cmolsiB422
Lsi04G014020	CmoCh09G003550	Cucurbita moschata (Rifu)	cmolsiB012
Lsi04G014020	Cla020854	Watermelon (97103) v1	lsiwmB317
Lsi04G014020	MELO3C016898	Melon (DHL92) v3.5.1	lsimeB314
Lsi04G014020	ClCG05G018130	Watermelon (Charleston Gray)	lsiwcgB289
Lsi04G014020	MELO3C016898.2	Melon (DHL92) v3.6.1	lsimedB330
Lsi04G014020	Cla97C05G099440	Watermelon (97103) v2	lsiwmbB290
Lsi04G014020	Bhi09G002546	Wax gourd	lsiwgoB394
Lsi04G014020	Cp4.1LG06g02530	Cucurbita pepo (Zucchini)	cpelsiB638
Lsi04G014020	Cp4.1LG02g05840	Cucurbita pepo (Zucchini)	cpelsiB462
Lsi04G014020	CsGy4G023890	Cucumber (Gy14) v2	cgyblsiB269
Lsi04G014020	Carg02783	Silver-seed gourd	carlsiB576
Lsi04G014020	Carg10706	Silver-seed gourd	carlsiB708
Lsi04G014020	CsaV3_4G035900	Cucumber (Chinese Long) v3	cuclsiB312

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G014020	Cucurbita maxima (Rimu)	cmalsiB060
Lsi04G014020	Cucurbita maxima (Rimu)	cmalsiB124
Lsi04G014020	Cucurbita maxima (Rimu)	cmalsiB174
Lsi04G014020	Cucurbita moschata (Rifu)	cmolsiB047
Lsi04G014020	Cucurbita moschata (Rifu)	cmolsiB112
Lsi04G014020	Cucurbita moschata (Rifu)	cmolsiB166
Lsi04G014020	Cucurbita pepo (Zucchini)	cpelsiB117
Lsi04G014020	Cucurbita pepo (Zucchini)	cpelsiB295
Lsi04G014020	Cucurbita pepo (Zucchini)	cpelsiB550
Lsi04G014020	Wild cucumber (PI 183967)	cpilsiB056
Lsi04G014020	Wild cucumber (PI 183967)	cpilsiB539
Lsi04G014020	Cucumber (Chinese Long) v2	culsiB055
Lsi04G014020	Cucumber (Chinese Long) v2	culsiB525
Lsi04G014020	Melon (DHL92) v3.5.1	lsimeB291
Lsi04G014020	Melon (DHL92) v3.5.1	lsimeB296
Lsi04G014020	Watermelon (Charleston Gray)	lsiwcgB255
Lsi04G014020	Watermelon (Charleston Gray)	lsiwcgB278
Lsi04G014020	Watermelon (97103) v1	lsiwmB286
Lsi04G014020	Watermelon (97103) v1	lsiwmB300
Lsi04G014020	Cucumber (Gy14) v2	cgyblsiB050
Lsi04G014020	Cucumber (Gy14) v2	cgyblsiB492
Lsi04G014020	Melon (DHL92) v3.6.1	lsimedB305
Lsi04G014020	Melon (DHL92) v3.6.1	lsimedB310
Lsi04G014020	Silver-seed gourd	carlsiB085
Lsi04G014020	Cucumber (Chinese Long) v3	cuclsiB062
Lsi04G014020	Cucumber (Chinese Long) v3	cuclsiB557
Lsi04G014020	Watermelon (97103) v2	lsiwmbB279
Lsi04G014020	Watermelon (97103) v2	lsiwmbB312
Lsi04G014020	Wax gourd	lsiwgoB401
Lsi04G014020	Wax gourd	lsiwgoB409
Lsi04G014020	Bottle gourd (USVL1VR-Ls)	lsilsiB100
Lsi04G014020	Bottle gourd (USVL1VR-Ls)	lsilsiB141
Lsi04G014020	Cucumber (Gy14) v1	cgylsiB578