Cucsa.299660 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.299660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	17.6 kDa class II heat shock protein
Location	scaffold02920 : 170851 .. 171693 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCACTCACTCATTCACAACGTCTATAAAACCCAACCAACCGTTCGCCATTCGTATCAACGAAAATTAGCTCTTCAATTTGCAAGAACATAGCATTACCAAAATTTCCTTTCTTACAAGCATTTCTACTTAGTTAAAAGACTCCAAAATTTCTCCACCAATCAAGAGAAAAATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGATGGGACTAGGACTATCGGGGATTCCTACTTCCAATCTTTGGATCACAAGTTCTCAGAATGTGGCGCATGGTGTTCTTTTTCTTCTTTCTTTTTCTTTTTTGGTGGCGTTTTCTGTTTTAATGACTGTTATGTGAAGGTTAAATGTGTAATGTGTGTTGAAGGTTTATGTTAATGAATATATTAAGGTTTTATCAGAAA

mRNA sequence

TTCTTCACTCACTCATTCACAACGTCTATAAAACCCAACCAACCGTTCGCCATTCGTATCAACGAAAATTAGCTCTTCAATTTGCAAGAACATAGCATTACCAAAATTTCCTTTCTTACAAGCATTTCTACTTAGTTAAAAGACTCCAAAATTTCTCCACCAATCAAGAGAAAAATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGATGGGACTAGGACTATCGGGGATTCCTACTTCCAATCTTTGGATCACAAGTTCTCAGAATGTGGCGCATGGTGTTCTTTTTCTTCTTTCTTTTTCTTTTTTGGTGGCGTTTTCTGTTTTAATGACTGTTATGTGAAGGTTAAATGTGTAATGTGTGTTGAAGGTTTATGTTAATGAATATATTAAGGTTTTATCAGAAA

Coding sequence (CDS)

ATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATCCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN*

Homology

[Close]

BLAST of Cucsa.299660 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.0e-66
Identity = 121/158 (76.58%), Postives = 144/158 (91.14%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEA---DKSFSTPTRAYVRDAKAMAATPADVKEYPNS 60
           MD R+MG++SP+F TLQH+MD++++    +K+ + PT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDI+VQVEDDN+LLI GERKR+EEKE AKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NANTDAISAVCQDGVL+VTVQKLPPP+PKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

[Close]

BLAST of Cucsa.299660 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.6e-65
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 1   MDLRIMGIDS-PIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++GID+ P+F TL H+M+ A E   S + P++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDI+VQVE+DNVLLISGERKREEEKE AK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NTDAISAVCQDGVLTVTVQKLPPP+PKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

[Close]

BLAST of Cucsa.299660 vs. Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-62
Identity = 115/151 (76.16%), Postives = 136/151 (90.07%), Query Frame = 1


Query: 6   MGIDSPIFSTLQHVMDLADEA-DKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M +DSP+F+TL H+MDL D+  +K+ + PTR YVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAI 125
           PG+K GDI+VQVED+NVLLISGERKREEEKE  KY++MERR+GKLMRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           SA+ QDGVLTVTV KLPPP+PKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

[Close]

BLAST of Cucsa.299660 vs. Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.5e-58
Identity = 113/157 (71.97%), Postives = 133/157 (84.71%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLA-DEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D P+F    H+MD A D+   + S P+R ++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDI+VQV+ DNVL ISGERKRE EEKE AKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPP+PKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

[Close]

BLAST of Cucsa.299660 vs. Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.0e-54
Identity = 106/155 (68.39%), Postives = 131/155 (84.52%), Query Frame = 1


Query: 5   IMGIDSPIFSTLQHVMDLADE---ADKSFST-PTRAYVRDAKAMAATPADVKEYPNSYVF 64
           +MG D P+   L ++++  D+    +KS ++ P+RAYVRDA+AMAATPADVKE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDI+VQVE DNVL+ISG+R REEEKE  KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           TD ISA+CQDGVLTVTV+KLPPP+PKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

[Close]

BLAST of Cucsa.299660 vs. TrEMBL
Match: A0A0A0L061_CUCSA (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.6e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of Cucsa.299660 vs. TrEMBL
Match: H6TB44_CITLA (HSP17.4 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.6e-78
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cucsa.299660 vs. TrEMBL
Match: M5XMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.6e-70
Identity = 131/155 (84.52%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G+DSP+FSTLQH+MD  DE DKSF+ PTR YVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 66  MDVRIAGLDSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 125

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDI+VQVEDDNVLLI+GERKREEEKE AKYVRMERRVGK MRKFVLPENAN
Sbjct: 126 VVDMPGLKSGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 185

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            +AISAVCQDGVLTVTV+KLPPP+PKKPK +EVK+
Sbjct: 186 VEAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 220

[Close]

BLAST of Cucsa.299660 vs. TrEMBL
Match: C9EIM5_9ROSA (CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.6e-70
Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G+DSP+FSTLQH+MD  +E DKSF+ PTR YVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPP+PKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

[Close]

BLAST of Cucsa.299660 vs. TrEMBL
Match: B9RQT7_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0706490 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-69
Identity = 132/157 (84.08%), Postives = 146/157 (92.99%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLA--DEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSY 60
           MDLR+MGIDSP+F TLQ +MD+   DE+DKSFS PTR YVRDAKAMA+TPADVKEYPNSY
Sbjct: 1   MDLRLMGIDSPLFQTLQQMMDITHGDESDKSFSAPTRTYVRDAKAMASTPADVKEYPNSY 60

Query: 61  VFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPEN 120
           VF++DMPGLK GDI+VQVEDDNVLLISGERKR+EEKE AKYVRMERRVGK MRKFVLPEN
Sbjct: 61  VFIIDMPGLKSGDIKVQVEDDNVLLISGERKRQEEKEGAKYVRMERRVGKFMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           ANTDAISAVCQDGVLTVTV+KLPPP+PKKPK +EVK+
Sbjct: 121 ANTDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 157

[Close]

BLAST of Cucsa.299660 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 191.8 bits (486), Expect = 3.2e-49
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADEA--DKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           PI S L+ ++++ ++   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAV 130
             +I+VQVE+DNVL++SGER+RE +E E  KYVRMERR+GK MRKF LPENA+ D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           C DGVL VTVQKLPPP+PKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of Cucsa.299660 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 183.7 bits (465), Expect = 8.6e-47
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 1


Query: 11  PIFSTLQHVMDLADE-ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           PIFS L+ +++  +E  +K+ + P+RAY+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVC 130
            +IQVQ+E++NVL++SG+R+R+ +E E  K+VRMERR+GK MRKF LP+NA+ + ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            DGVL VT+ KLPPP+PKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of Cucsa.299660 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 107.8 bits (268), Expect = 6.0e-24
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1


Query: 28  KSFSTPTRAYV-----RDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVL 87
           + F TP+ A       RD  A      D KE P ++VF  D+PGLK  +++V+VED NVL
Sbjct: 28  EGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVL 87

Query: 88  LISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPP 147
            ISGER +E E++  K+ R+ER  GK MR+F LPENA  + + A  ++GVLTV V K P 
Sbjct: 88  QISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP- 147

Query: 148 PQPKKPKIVEVKVN 157
              KKP++  + ++
Sbjct: 148 --EKKPQVKSIDIS 158

[Close]

BLAST of Cucsa.299660 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23
Identity = 53/114 (46.49%), Postives = 85/114 (74.56%), Query Frame = 1


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLI--SGERKREEEKEE--AKYVRME 107
           P D+ E P  Y+F +D+PG+   DIQV VE++  L+I  +G+RKR++++ E  +KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           RR+ + L++KF LPE+A+  +++A  Q+GVLTV ++KL PPQP KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of Cucsa.299660 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-22
Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 1


Query: 28  KSFSTP--TRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLIS 87
           + F TP  T A  +D  A      D +E P ++VF  D+PGLK  +++V+VED N+L IS
Sbjct: 28  EGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQIS 87

Query: 88  GERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQP 147
           GER  E E++   + R+ER  GK MR+F LPENA  + + A  ++GVL+VTV K+   Q 
Sbjct: 88  GERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKV---QE 147

Query: 148 KKPKIVEVKVN 157
            KP++  V ++
Sbjct: 148 SKPEVKSVDIS 155

[Close]

BLAST of Cucsa.299660 vs. NCBI nr
Match: gi|449447155|ref|XP_004141334.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 6.6e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of Cucsa.299660 vs. NCBI nr
Match: gi|315932722|gb|ADU55791.1| (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 298.9 bits (764), Expect = 5.2e-78
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cucsa.299660 vs. NCBI nr
Match: gi|659103975|ref|XP_008452767.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 86  MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 145

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK EAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 146 VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK-EAKYVRMERRVGKLMRKFVLPENAN 205

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 206 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 240

[Close]

BLAST of Cucsa.299660 vs. NCBI nr
Match: gi|657964030|ref|XP_008373637.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 132/155 (85.16%), Postives = 145/155 (93.55%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G D+P+FSTLQH+MD+AD+A+KSF+ PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDIRIPGFDAPLFSTLQHIMDVADDAEKSFNAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDI+VQVEDDNVLLISGERKREEEKE  KYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            DAISAVCQDGVLTVTV+KLPPP+PKKPK +EVK+
Sbjct: 121 VDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKI 155

[Close]

BLAST of Cucsa.299660 vs. NCBI nr
Match: gi|259123935|gb|ACV93250.1| (CII small heat shock protein 1 [Prunus salicina])

HSP 1 Score: 272.3 bits (695), Expect = 5.2e-70
Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD+RI G+DSP+FSTLQH+MD  +E DKSF+ PTR YVRDAKAMA+TPADVKEYPNSYVF
Sbjct: 1   MDVRIAGLDSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLK GDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            +AISAVCQDGVLTVTVQKLPPP+PKKPK +EVK+
Sbjct: 121 VEAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKI 155

The following BLAST results are available for this feature:

BLAST of Cucsa.299660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP21_SOYBN	6.0e-66	76.58	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP21_SOLPE	8.6e-65	80.13	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_PEA	2.3e-62	76.16	17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1	[more]
HSP21_IPONI	3.5e-58	71.97	17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1	[more]
HSP21_HELAN	4.0e-54	68.39	17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1	[more]

BLAST of Cucsa.299660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L061_CUCSA	4.6e-81	100.00	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus GN...	[more]
H6TB44_CITLA	3.6e-78	96.15	HSP17.4 OS=Citrullus lanatus PE=2 SV=1	[more]
M5XMI8_PRUPE	3.6e-70	84.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011156mg PE=3 SV=1	[more]
C9EIM5_9ROSA	3.6e-70	85.16	CII small heat shock protein 1 OS=Prunus salicina PE=2 SV=1	[more]
B9RQT7_RICCO	1.1e-69	84.08	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0706490 PE=3 SV=1	[more]

BLAST of Cucsa.299660 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12020.1	3.2e-49	64.19	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	8.6e-47	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	6.0e-24	43.28	heat shock protein 18.2	[more]
AT1G54050.1	5.1e-23	46.49	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	2.5e-22	41.98	heat shock protein 17.4	[more]

BLAST of Cucsa.299660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447155\|ref\|XP_004141334.1\|	6.6e-81	100.00	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis sativus]	[more]
gi\|315932722\|gb\|ADU55791.1\|	5.2e-78	96.15	HSP17.4 [Citrullus lanatus]	[more]
gi\|659103975\|ref\|XP_008452767.1\|	4.4e-77	96.79	PREDICTED: 17.1 kDa class II heat shock protein-like [Cucumis melo]	[more]
gi\|657964030\|ref\|XP_008373637.1\|	1.8e-70	85.16	PREDICTED: 17.1 kDa class II heat shock protein-like [Malus domestica]	[more]
gi\|259123935\|gb\|ACV93250.1\|	5.2e-70	85.16	CII small heat shock protein 1 [Prunus salicina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.299660.1	Cucsa.299660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 score: 2.4
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 50..139 score: 23
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 10..150 score: 2.9
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 15..150 score: 5.93
None	No IPR available	unknown	Coil	Coil	coord: 92..112 scor
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 1..155 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.299660	Cla020854	Watermelon (97103) v1	cgywmB543
Cucsa.299660	Csa4G646340	Cucumber (Chinese Long) v2	cgycuB424
Cucsa.299660	MELO3C016898	Melon (DHL92) v3.5.1	cgymeB492
Cucsa.299660	ClCG05G018130	Watermelon (Charleston Gray)	cgywcgB515
Cucsa.299660	CSPI04G25580	Wild cucumber (PI 183967)	cgycpiB448
Cucsa.299660	CmaCh09G003550	Cucurbita maxima (Rimu)	cgycmaB0826
Cucsa.299660	CmaCh01G017130	Cucurbita maxima (Rimu)	cgycmaB0827
Cucsa.299660	CmoCh09G003550	Cucurbita moschata (Rifu)	cgycmoB0820
Cucsa.299660	CmoCh01G017970	Cucurbita moschata (Rifu)	cgycmoB0821
Cucsa.299660	Lsi04G014020	Bottle gourd (USVL1VR-Ls)	cgylsiB483
Cucsa.299660	Cp4.1LG02g05840	Cucurbita pepo (Zucchini)	cgycpeB0783
Cucsa.299660	Cp4.1LG06g02530	Cucurbita pepo (Zucchini)	cgycpeB0784
Cucsa.299660	MELO3C016898.2	Melon (DHL92) v3.6.1	cgymedB491
Cucsa.299660	CsaV3_4G035900	Cucumber (Chinese Long) v3	cgycucB461
Cucsa.299660	Cla97C05G099440	Watermelon (97103) v2	cgywmbB515
Cucsa.299660	Bhi09G002546	Wax gourd	cgywgoB598
Cucsa.299660	Carg02783	Silver-seed gourd	carcgyB0711
Cucsa.299660	Carg10706	Silver-seed gourd	carcgyB0876

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.299660	Cucurbita pepo (Zucchini)	cgycpeB0782
Cucsa.299660	Bottle gourd (USVL1VR-Ls)	cgylsiB482
Cucsa.299660	Melon (DHL92) v3.6.1	cgymedB490
Cucsa.299660	Cucumber (Chinese Long) v3	cgycucB462
Cucsa.299660	Watermelon (97103) v2	cgywmbB517
Cucsa.299660	Wax gourd	cgywgoB599
Cucsa.299660	Cucumber (Gy14) v1	cgycgyB140
Cucsa.299660	Wild cucumber (PI 183967)	cgycpiB449
Cucsa.299660	Cucumber (Chinese Long) v2	cgycuB425
Cucsa.299660	Melon (DHL92) v3.5.1	cgymeB491
Cucsa.299660	Watermelon (Charleston Gray)	cgywcgB514
Cucsa.299660	Watermelon (97103) v1	cgywmB542