CmaCh19G006090 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G006090
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCalcium binding protein
LocationCma_Chr19 : 6647034 .. 6648209 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCAGGCGTTGCAGCCGAGCATGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACTGACGGCGATGGTTACATAAACTTGAACGAGTTTATGGAGGTTCTCCGGAGCGGAGTTCAGACTCGAGAGGTGGAATCTGCTTTCAAGACGTTTGATGTGAATGGGGATCAGAAGATTAGTGCCGAGGAAGTGATGAGAGTGTTGAAGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGGAACGGCGACGGCATGGTGGATATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGTTTAGAGGATGAGAGTTTCAACTTTTAAGGTTCTTTAATGGCGTTTGATTGTTAAAAAGTGTTAGTATATTGTAAAGGCTTTGTATAAATTCGACCCTACTATTATTTCCATCCCATAACAATTCCAACTTCTCTTTTAGTTAAACTGCTTCGGGTGAATCGAAACATGATAACAATGACATTTTTTATAAGCTTACAAACACTACTTTCACTCGTAAGTAAGTCTATATGTTTTGTTACCACTTTCTTCTACTGATATTTTAATAAACCAAGTCAAGGTTTAGAACTAGCTGGGATTCGAGTGATTCTTTCAACCTAATTGAAACAGAGGAGAAAAAAATTTCAAACCCAATAATTACCACTGGGACGTTTTCTTTTGCTAAAAGCTTACTAATCATCTATCAGGAGAAGAAAACTAGCACTTTCCAATTCAGTTCCAACAATAAACAGCAGGAAAAGAAGAAAAAAAAAAAACGATGATAAGACGAATGATTAAATATCAGGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTAGTTCGCATAAGGATATTGATGGTCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

mRNA sequence

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCAGGCGTTGCAGCCGAGCATGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACTGACGGCGATGGTTACATAAACTTGAACGAGTTTATGGAGGTTCTCCGGAGCGGAGTTCAGACTCGAGAGGTGGAATCTGCTTTCAAGACGTTTGATGTGAATGGGGATCAGAAGATTAGTGCCGAGGAAGTGATGAGAGTGTTGAAGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGGAACGGCGACGGCATGGTGGATATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAACTCGTCTCCAATCGGTACCTTGTTTCGTAGTTCGCATAAGGATATTGATGGTCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Coding sequence (CDS)

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCAGGCGTTGCAGCCGAGCATGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACTGACGGCGATGGTTACATAAACTTGAACGAGTTTATGGAGGTTCTCCGGAGCGGAGTTCAGACTCGAGAGGTGGAATCTGCTTTCAAGACGTTTGATGTGAATGGGGATCAGAAGATTAGTGCCGAGGAAGTGATGAGAGTGTTGAAGGGATTAGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTGAGGGCGGTGGACAGGAACGGCGACGGCATGGTGGATATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAACTCGTCTCCAATCGGTACCTTGTTTCGTAGTTCGCATAAGGATATTGATGGTCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Protein sequence

MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLRSGVQTREVESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSANSSPIGTLFRSSHKDIDGLTLYIELLLGR
Homology
[Close]
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-46
Identity = 95/182 (52.20%), Postives = 138/182 (75.82%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQA-----LQPSMEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS+ E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTRE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+I+  EF++  +   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+NGD KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 59/138 (42.75%), Postives = 89/138 (64.49%), Query Frame = 1 

Query: 45  MEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEF 104
           + E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  GDGYIN  EF
Sbjct: 35  IRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

Query: 105 MEVLRSGVQTREV----ESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAV 164
           +E+   G+   +V    + AF  +D++G+  ISAEE+  VL+ LG++CSI +CR+M+  V
Sbjct: 95  VELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGV 154

Query: 165 DRNGDGMVDMDEFMTMMT 179
           D++GDG +D +EF  MMT
Sbjct: 155 DKDGDGTIDFEEFKIMMT 172

[Close]
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 61/140 (43.57%), Postives = 95/140 (67.86%), Query Frame = 1 

Query: 44  SMEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNE 103
           SME+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D DG+G+I+L+E
Sbjct: 12  SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 104 FMEVLRSGVQT------REVESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMV 163
           F+ + +   Q+      R+++ AF  +D++ + +ISA E+  V+K LGEKCSI+DC+RM+
Sbjct: 72  FVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMI 131

Query: 164 RAVDRNGDGMVDMDEFMTMM 178
             VD +GDG VD +EF  MM
Sbjct: 132 NKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 1 

Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYINL+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVLRSGVQTREVESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF  +D + +  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 59/157 (37.58%), Postives = 103/157 (65.61%), Query Frame = 1 

Query: 35  SGLRQALQPSMEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ ++   SM++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYINLNEFMEVLRSGV--------QTREVESAFKTFDVNGDQKISAEEVMRVLKGLGE 154
           G+G+I+L+EF+ + + G+           +++ AF+ +D++G+ +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSANS 184
           KCS++DC++M+  VD +GDG V+ DEF  MM+    +
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMSNGGGA 161

[Close]
BLAST of CmaCh19G006090 vs. TrEMBL
Match: A0A0A0K804_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.8e-80
Identity = 155/183 (84.70%), Postives = 171/183 (93.44%), Query Frame = 1 

Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLR+ALQPS EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLRS--GVQTREVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYINLNEFMEV RS  GVQ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AFKTFD+NGD+KISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSA 182
           RSA
Sbjct: 181 RSA 183

[Close]
BLAST of CmaCh19G006090 vs. TrEMBL
Match: M5VNS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.8e-55
Identity = 105/179 (58.66%), Postives = 146/179 (81.56%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           ++N LD QY++ K+KFLR+PS +FSF++RQ+SG+  + +P+  E+K++F  FD+N+DG+I
Sbjct: 3   SANFLDFQYNLSKRKFLRKPSHVFSFRDRQNSGVSPSFEPNPNEMKRVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTREVESAF 123
           S+ EY+ IL ALG+G+ + EV KIF+  D DGDG+IN  EFMEV +   G++T ++++AF
Sbjct: 63  SQPEYKAILRALGKGNMVGEVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTIDIQNAF 122

Query: 124 KTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD+NGD KISAEEVM VL  LGE CS+EDC+RMVRAVD +GDG+VD+DEFMTMMTRS
Sbjct: 123 RTFDLNGDGKISAEEVMEVLGRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRS 181

[Close]
BLAST of CmaCh19G006090 vs. TrEMBL
Match: B9HS04_POPTR (Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-54
Identity = 106/182 (58.24%), Postives = 144/182 (79.12%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           N + L+ QY + + KFLR+PSRLFS ++RQSSG+    QP+M+E++Q+F  FD+N+DG+I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGMLSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTREVESAF 123
           S+ EY+  L ALG+G+ + EV KIF+ VD DGDG+I+  EF+E  +   G++T ++++AF
Sbjct: 63  SQQEYKDTLRALGQGNMLGEVPKIFQVVDLDGDGFIDFKEFVEAQKKGGGIRTTDIQTAF 122

Query: 124 KTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
           +TFD NGD KISAEEVM VL+ LGE+CS+EDCRRMV AVD +GDGMV+MDEFMTMMTRS 
Sbjct: 123 QTFDSNGDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTRSM 182

[Close]
BLAST of CmaCh19G006090 vs. TrEMBL
Match: V4SBR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 102/179 (56.98%), Postives = 137/179 (76.54%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTREVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+I+  EFME  +   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 KTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRS 181

[Close]
BLAST of CmaCh19G006090 vs. TrEMBL
Match: A0A067F0V1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 102/179 (56.98%), Postives = 137/179 (76.54%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTREVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+I+  EFME  +   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 KTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRS 181

[Close]
BLAST of CmaCh19G006090 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 187.6 bits (475), Expect = 8.0e-48
Identity = 95/182 (52.20%), Postives = 138/182 (75.82%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQA-----LQPSMEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS+ E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTRE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+I+  EF++  +   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+NGD KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]
BLAST of CmaCh19G006090 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 59/138 (42.75%), Postives = 89/138 (64.49%), Query Frame = 1 

Query: 45  MEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEF 104
           + E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  GDGYIN  EF
Sbjct: 35  IRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

Query: 105 MEVLRSGVQTREV----ESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAV 164
           +E+   G+   +V    + AF  +D++G+  ISAEE+  VL+ LG++CSI +CR+M+  V
Sbjct: 95  VELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGV 154

Query: 165 DRNGDGMVDMDEFMTMMT 179
           D++GDG +D +EF  MMT
Sbjct: 155 DKDGDGTIDFEEFKIMMT 172

[Close]
BLAST of CmaCh19G006090 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 1 

Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYINL+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVLRSGVQTREVESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF  +D + +  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]
BLAST of CmaCh19G006090 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 61/140 (43.57%), Postives = 95/140 (67.86%), Query Frame = 1 

Query: 44  SMEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNE 103
           SME+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D DG+G+I+L+E
Sbjct: 12  SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 104 FMEVLRSGVQT------REVESAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMV 163
           F+ + +   Q+      R+++ AF  +D++ + +ISA E+  V+K LGEKCSI+DC+RM+
Sbjct: 72  FVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMI 131

Query: 164 RAVDRNGDGMVDMDEFMTMM 178
             VD +GDG VD +EF  MM
Sbjct: 132 NKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CmaCh19G006090 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 59/157 (37.58%), Postives = 103/157 (65.61%), Query Frame = 1 

Query: 35  SGLRQALQPSMEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ ++   SM++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYINLNEFMEVLRSGV--------QTREVESAFKTFDVNGDQKISAEEVMRVLKGLGE 154
           G+G+I+L+EF+ + + G+           +++ AF+ +D++G+ +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSANS 184
           KCS++DC++M+  VD +GDG V+ DEF  MM+    +
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMSNGGGA 161

[Close]
BLAST of CmaCh19G006090 vs. NCBI nr
Match: gi|659109907|ref|XP_008454944.1| (PREDICTED: calmodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 8.8e-81
Identity = 157/183 (85.79%), Postives = 172/183 (93.99%), Query Frame = 1 

Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRD 60
           MP+N N LDLQY+V KKKFLREPSRLFSFK+RQSSGLR+ALQPS+EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLRS--GVQTREVE 120
           GRISKHEYRGIL+ALGRGSSMEEVQKIF+AVD+DGDGYINLNEFMEV RS  GVQ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AFKTFD+NGD+KISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSA 182
           RSA
Sbjct: 181 RSA 183

[Close]
BLAST of CmaCh19G006090 vs. NCBI nr
Match: gi|778725125|ref|XP_004137114.2| (PREDICTED: calmodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79
Identity = 155/183 (84.70%), Postives = 171/183 (93.44%), Query Frame = 1 

Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLR+ALQPS EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLRS--GVQTREVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYINLNEFMEV RS  GVQ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFKTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AFKTFD+NGD+KISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSA 182
           RSA
Sbjct: 181 RSA 183

[Close]
BLAST of CmaCh19G006090 vs. NCBI nr
Match: gi|764562626|ref|XP_011461491.1| (PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57
Identity = 112/179 (62.57%), Postives = 148/179 (82.68%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           N + LD QY++ K+KFLR P+RLFS ++RQ+SGL    +P++ E+K++F+ FDTN+DG+I
Sbjct: 3   NMSFLDFQYNLSKRKFLRTPTRLFSSRDRQNSGLTPGFEPNLNEMKRVFEKFDTNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLR--SGVQTREVESAF 123
           S+ +YR IL ALG+GS + EV KIFK VD DGDG+IN  EFMEV +   GV+T ++++AF
Sbjct: 63  SQQDYRAILRALGKGSMVGEVPKIFKLVDLDGDGFINFKEFMEVHKKSGGVKTIDIQNAF 122

Query: 124 KTFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD+NGD KISAEEVM VLK LGE+CS+E+C+RMVRAVD +GDGMVD+DEFMTMMTRS
Sbjct: 123 QTFDLNGDGKISAEEVMEVLKRLGERCSLEECQRMVRAVDTDGDGMVDLDEFMTMMTRS 181

[Close]
BLAST of CmaCh19G006090 vs. NCBI nr
Match: gi|1009150194|ref|XP_015892888.1| (PREDICTED: calmodulin-like protein 1 [Ziziphus jujuba])

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 112/179 (62.57%), Postives = 147/179 (82.12%), Query Frame = 1 

Query: 6   NLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRISK 65
           + LD QY++ K+KFLR+P+RLFS ++RQSSGL    QP+  E++Q+F  FD N+DG+IS+
Sbjct: 5   SFLDFQYNISKRKFLRKPTRLFSSQDRQSSGLT-TFQPNQAEMRQVFDKFDANKDGKISQ 64

Query: 66  HEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEVLRSG--VQTREVESAFKT 125
           HEY+GIL ALGR +++E+V KIF+  D DGDG+IN  EFMEV + G  V+T ++++AF+T
Sbjct: 65  HEYKGILRALGRTNTIEQVPKIFQIADLDGDGFINFKEFMEVQKKGGGVKTIDIQNAFRT 124

Query: 126 FDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAN 183
           FD+NGD KISA EV+ VLK LGE+CS+EDC+RMVRAVD +GDGMVDMDEFMTMMTRS N
Sbjct: 125 FDLNGDGKISAVEVLEVLKRLGERCSLEDCQRMVRAVDIDGDGMVDMDEFMTMMTRSLN 182

[Close]
BLAST of CmaCh19G006090 vs. NCBI nr
Match: gi|657963113|ref|XP_008373157.1| (PREDICTED: calmodulin-like protein 1 [Malus domestica])

HSP 1 Score: 226.9 bits (577), Expect = 3.4e-56
Identity = 107/178 (60.11%), Postives = 147/178 (82.58%), Query Frame = 1 

Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRQALQPSMEEIKQIFKWFDTNRDGRI 63
           N+N LD QY++ K+KFLR+PS++FSF++RQ SG+    +P+  E+K++F+ FD+N+DG+I
Sbjct: 3   NANFLDFQYNLSKRKFLRKPSQMFSFRDRQYSGIAPTFEPNPNEMKKVFEKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYINLNEFMEV-LRSGVQTREVESAFK 123
           S+ EY+ IL ALG+G+ + EV KIFK VD D DG+IN  EFMEV  + G++T ++++AF+
Sbjct: 63  SQAEYKAILRALGKGNMIGEVPKIFKFVDLDEDGFINFKEFMEVHKKGGIRTMDIQNAFR 122

Query: 124 TFDVNGDQKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
            FD+NGD KISAEEVM VL+GL E+C++EDCRRMVRAVD +GDGMVD+DEFMTMMTRS
Sbjct: 123 MFDLNGDGKISAEEVMEVLRGLEERCNLEDCRRMVRAVDTDGDGMVDLDEFMTMMTRS 180

The following BLAST results are available for this feature:
BLAST of CmaCh19G006090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML1_ARATH1.4e-4652.20Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1[more]
CML25_ARATH1.1e-2742.75Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=... [more]
CML23_ARATH1.1e-2743.57Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=... [more]
CML27_ARATH1.1e-2744.85Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=... [more]
CML24_ARATH2.5e-2737.58Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2[more]
BLAST of CmaCh19G006090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K804_CUCSA8.8e-8084.70Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1[more]
M5VNS5_PRUPE9.8e-5558.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1[more]
B9HS04_POPTR2.2e-5458.24Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE... [more]
V4SBR8_9ROSI1.3e-5156.98Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1[more]
A0A067F0V1_CITSI1.3e-5156.98Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1[more]
BLAST of CmaCh19G006090 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15680.18.0e-4852.20 Calcium-binding EF-hand family protein[more]
AT1G24620.16.3e-2942.75 EF hand calcium-binding protein family[more]
AT1G18210.16.3e-2944.85 Calcium-binding EF-hand family protein[more]
AT1G66400.16.3e-2943.57 calmodulin like 23[more]
AT5G37770.11.4e-2837.58 EF hand calcium-binding protein family[more]
BLAST of CmaCh19G006090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109907|ref|XP_008454944.1|8.8e-8185.79PREDICTED: calmodulin-like protein 1 [Cucumis melo][more]
gi|778725125|ref|XP_004137114.2|1.3e-7984.70PREDICTED: calmodulin-like protein 1 [Cucumis sativus][more]
gi|764562626|ref|XP_011461491.1|1.0e-5762.57PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca][more]
gi|1009150194|ref|XP_015892888.1|1.2e-5662.57PREDICTED: calmodulin-like protein 1 [Ziziphus jujuba][more]
gi|657963113|ref|XP_008373157.1|3.4e-5660.11PREDICTED: calmodulin-like protein 1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G006090.1CmaCh19G006090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 118..177
score: 5.8E-12coord: 46..108
score: 6.8
IPR002048EF-hand domainSMARTSM00054efh_1coord: 47..75
score: 1.3E-4coord: 152..180
score: 0.0017coord: 83..111
score: 3.0E-7coord: 116..144
score: 3.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 116..147
score: 12.868coord: 148..183
score: 13.37coord: 43..78
score: 13.816coord: 79..114
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 44..180
score: 8.1
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 42..178
score: 1.49
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 125..137
score: -coord: 92..104
score: -coord: 161..173
score: -coord: 56..68
scor
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 51..72
score: 5.6E-5coord: 97..115
score: 5.6E-5coord: 75..94
score: 5.
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 42..181
score: 2.3
NoneNo IPR availablePANTHERPTHR10891:SF533SUBFAMILY NOT NAMEDcoord: 42..181
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G006090Cla016007Watermelon (97103) v1cmawmB503
CmaCh19G006090Csa7G073720Cucumber (Chinese Long) v2cmacuB528
CmaCh19G006090MELO3C018445Melon (DHL92) v3.5.1cmameB463
CmaCh19G006090ClCG02G005880Watermelon (Charleston Gray)cmawcgB460
CmaCh19G006090CSPI07G07690Wild cucumber (PI 183967)cmacpiB534
CmaCh19G006090CmoCh19G006270Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G006090Lsi03G004870Bottle gourd (USVL1VR-Ls)cmalsiB484
CmaCh19G006090Cp4.1LG15g04910Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G006090Cp4.1LG04g08070Cucurbita pepo (Zucchini)cmacpeB539
CmaCh19G006090MELO3C018445.2Melon (DHL92) v3.6.1cmamedB535
CmaCh19G006090CsaV3_7G008650Cucumber (Chinese Long) v3cmacucB0639
CmaCh19G006090Cla97C02G032860Watermelon (97103) v2cmawmbB531
CmaCh19G006090Bhi05G000996Wax gourdcmawgoB0641
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G006090Melon (DHL92) v3.6.1cmamedB540
CmaCh19G006090Melon (DHL92) v3.6.1cmamedB560
CmaCh19G006090Melon (DHL92) v3.6.1cmamedB565
CmaCh19G006090Silver-seed gourdcarcmaB0288
CmaCh19G006090Silver-seed gourdcarcmaB0528
CmaCh19G006090Silver-seed gourdcarcmaB0755
CmaCh19G006090Silver-seed gourdcarcmaB1118
CmaCh19G006090Cucumber (Chinese Long) v3cmacucB0635
CmaCh19G006090Cucumber (Chinese Long) v3cmacucB0618
CmaCh19G006090Cucumber (Chinese Long) v3cmacucB0627
CmaCh19G006090Watermelon (97103) v2cmawmbB521
CmaCh19G006090Watermelon (97103) v2cmawmbB536
CmaCh19G006090Watermelon (97103) v2cmawmbB546
CmaCh19G006090Wax gourdcmawgoB0640
CmaCh19G006090Wax gourdcmawgoB0664
CmaCh19G006090Cucurbita maxima (Rimu)cmacmaB149
CmaCh19G006090Cucurbita maxima (Rimu)cmacmaB415
CmaCh19G006090Cucurbita maxima (Rimu)cmacmaB457
CmaCh19G006090Cucurbita maxima (Rimu)cmacmaB462
CmaCh19G006090Cucumber (Gy14) v1cgycmaB0624
CmaCh19G006090Cucumber (Gy14) v1cgycmaB0686
CmaCh19G006090Cucurbita moschata (Rifu)cmacmoB494
CmaCh19G006090Cucurbita moschata (Rifu)cmacmoB530
CmaCh19G006090Cucurbita moschata (Rifu)cmacmoB534
CmaCh19G006090Wild cucumber (PI 183967)cmacpiB513
CmaCh19G006090Cucumber (Chinese Long) v2cmacuB513
CmaCh19G006090Melon (DHL92) v3.5.1cmameB466
CmaCh19G006090Melon (DHL92) v3.5.1cmameB481
CmaCh19G006090Melon (DHL92) v3.5.1cmameB485
CmaCh19G006090Watermelon (Charleston Gray)cmawcgB457
CmaCh19G006090Watermelon (Charleston Gray)cmawcgB465
CmaCh19G006090Watermelon (97103) v1cmawmB484
CmaCh19G006090Watermelon (97103) v1cmawmB496
CmaCh19G006090Watermelon (97103) v1cmawmB497
CmaCh19G006090Cucurbita pepo (Zucchini)cmacpeB531
CmaCh19G006090Cucurbita pepo (Zucchini)cmacpeB532
CmaCh19G006090Bottle gourd (USVL1VR-Ls)cmalsiB475
CmaCh19G006090Bottle gourd (USVL1VR-Ls)cmalsiB472
CmaCh19G006090Bottle gourd (USVL1VR-Ls)cmalsiB493
CmaCh19G006090Bottle gourd (USVL1VR-Ls)cmalsiB498
CmaCh19G006090Cucumber (Gy14) v2cgybcmaB210
CmaCh19G006090Cucumber (Gy14) v2cgybcmaB379
CmaCh19G006090Cucumber (Gy14) v2cgybcmaB945