CmoCh19G006270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G006270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium binding protein
Location	Cmo_Chr19 : 6850031 .. 6851172 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGTTTAGAGGATGAGTGTTTCAACTTTTAAGGTTCTTTATGGCGTTTGATTGTTAAAAAGTGTTAGTATAATGTAAAGGCTTTGTATAAATTCCAACTTCTCTTTTAGTTAAACTGCTTCGGGTGGACCGAAACACGATAACAATGTCATTTTTTATAAGCTTACAAACACTACTTTCACTTGTAAGTTTATATGTTTTGTTACCACTTTCTTCTACTAATGTTGTAATAAACCAAGTCAAGGCTTAGAACTAGCTAGGATTCAAGTGATTCTTTCAACCTAATTGAAAATGAGGAGAAAACAAATTTCAAACCCAGTAATTACCACTGGGACGTTTTCTTTTGCTAAAAGCTTACTAATCATCTATCAGGAGAAGAAAACTAGCACTTTCCAATTCAGTTCCAACAATAAACAGCAGGAGAAGAAGGAAAAAAAAAAAAAAGGATGATAAGACGAATGATTAAATATCAGGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

mRNA sequence

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Coding sequence (CDS)

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Homology

[Close]

BLAST of CmoCh19G006270 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-46
Identity = 95/182 (52.20%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRA-----LQPSTEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS  E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+ID  EF++ ++   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+N D KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of CmoCh19G006270 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 34  SSGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDT 93
           S  + R    S E+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYIDLNEFMEVHRSGVQTG------EVESAFETFDVNRDRKISAEEVMRVLKGLGEK 153
           DG+G+IDL+EF+ + +   Q+       +++ AF+ +D++R+ +ISA E+  V+K LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDRNGDGMVDMDEFMTMM 178
           CSI+DC+RM+  VD +GDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of CmoCh19G006270 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYI+L+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGVQTGEVESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF+ +D +++  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]

BLAST of CmoCh19G006270 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 37  LRRALQPSTE--EIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 96
           L++A    TE  E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  
Sbjct: 25  LQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRK 84

Query: 97  GDGYIDLNEFMEVHRSGVQTGEV----ESAFETFDVNRDRKISAEEVMRVLKGLGEKCSI 156
           GDGYI+  EF+E++  G+   +V    + AF  +D++ +  ISAEE+  VL+ LG++CSI
Sbjct: 85  GDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSI 144

Query: 157 EDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAKYD 185
            +CR+M+  VD++GDG +D +EF  MMT  ++ D
Sbjct: 145 AECRKMIGGVDKDGDGTIDFEEFKIMMTMGSRRD 178

[Close]

BLAST of CmoCh19G006270 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 5.9e-27
Identity = 61/152 (40.13%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 35  SGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ R+   S ++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYIDLNEFMEVHRSGVQTG--------EVESAFETFDVNRDRKISAEEVMRVLKGLGE 154
           G+G+IDL+EF+ + + G+  G        +++ AFE +D++ + +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 179
           KCS++DC++M+  VD +GDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]

BLAST of CmoCh19G006270 vs. TrEMBL
Match: A0A0A0K804_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.5e-80
Identity = 156/184 (84.78%), Postives = 172/184 (93.48%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS+EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270 vs. TrEMBL
Match: M5VNS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 105/181 (58.01%), Postives = 146/181 (80.66%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           ++N LD QY++ K+KFLR+PS +FSF++RQ+SG+  + +P+  E+K++F  FD+N+DG+I
Sbjct: 3   SANFLDFQYNLSKRKFLRKPSHVFSFRDRQNSGVSPSFEPNPNEMKRVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL ALG+G+ + EV KIF+  D DGDG+I+  EFMEVH+   G++T ++++AF
Sbjct: 63  SQPEYKAILRALGKGNMVGEVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTIDIQNAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD+N D KISAEEVM VL  LGE CS+EDC+RMVRAVD +GDG+VD+DEFMTMMTRS 
Sbjct: 123 RTFDLNGDGKISAEEVMEVLGRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270 vs. TrEMBL
Match: V4SBR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 105/181 (58.01%), Postives = 138/181 (76.24%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+ID  EFME H+   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS 
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270 vs. TrEMBL
Match: A0A067F0V1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 105/181 (58.01%), Postives = 138/181 (76.24%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+ID  EFME H+   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS 
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270 vs. TrEMBL
Match: B9HS04_POPTR (Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-53
Identity = 104/179 (58.10%), Postives = 141/179 (78.77%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + L+ QY + + KFLR+PSRLFS ++RQSSG+    QP+ +E++Q+F  FD+N+DG+I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGMLSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+  L ALG+G+ + EV KIF+ VD DGDG+ID  EF+E  +   G++T ++++AF
Sbjct: 63  SQQEYKDTLRALGQGNMLGEVPKIFQVVDLDGDGFIDFKEFVEAQKKGGGIRTTDIQTAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD N D KISAEEVM VL+ LGE+CS+EDCRRMV AVD +GDGMV+MDEFMTMMTRS
Sbjct: 123 QTFDSNGDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTRS 181

[Close]

BLAST of CmoCh19G006270 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-47
Identity = 95/182 (52.20%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRA-----LQPSTEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS  E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+ID  EF++ ++   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+N D KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of CmoCh19G006270 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 34  SSGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDT 93
           S  + R    S E+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYIDLNEFMEVHRSGVQTG------EVESAFETFDVNRDRKISAEEVMRVLKGLGEK 153
           DG+G+IDL+EF+ + +   Q+       +++ AF+ +D++R+ +ISA E+  V+K LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDRNGDGMVDMDEFMTMM 178
           CSI+DC+RM+  VD +GDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of CmoCh19G006270 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYI+L+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGVQTGEVESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF+ +D +++  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]

BLAST of CmoCh19G006270 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 37  LRRALQPSTE--EIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 96
           L++A    TE  E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  
Sbjct: 25  LQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRK 84

Query: 97  GDGYIDLNEFMEVHRSGVQTGEV----ESAFETFDVNRDRKISAEEVMRVLKGLGEKCSI 156
           GDGYI+  EF+E++  G+   +V    + AF  +D++ +  ISAEE+  VL+ LG++CSI
Sbjct: 85  GDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSI 144

Query: 157 EDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAKYD 185
            +CR+M+  VD++GDG +D +EF  MMT  ++ D
Sbjct: 145 AECRKMIGGVDKDGDGTIDFEEFKIMMTMGSRRD 178

[Close]

BLAST of CmoCh19G006270 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 61/152 (40.13%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 35  SGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ R+   S ++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYIDLNEFMEVHRSGVQTG--------EVESAFETFDVNRDRKISAEEVMRVLKGLGE 154
           G+G+IDL+EF+ + + G+  G        +++ AFE +D++ + +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 179
           KCS++DC++M+  VD +GDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]

BLAST of CmoCh19G006270 vs. NCBI nr
Match: gi|659109907|ref|XP_008454944.1| (PREDICTED: calmodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 2.1e-80
Identity = 158/184 (85.87%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N LDLQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRGSSMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270 vs. NCBI nr
Match: gi|778725125|ref|XP_004137114.2| (PREDICTED: calmodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 7.9e-80
Identity = 156/184 (84.78%), Postives = 172/184 (93.48%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS+EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270 vs. NCBI nr
Match: gi|764562626|ref|XP_011461491.1| (PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 229.2 bits (583), Expect = 7.2e-57
Identity = 111/181 (61.33%), Postives = 148/181 (81.77%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY++ K+KFLR P+RLFS ++RQ+SGL    +P+  E+K++F+ FDTN+DG+I
Sbjct: 3   NMSFLDFQYNLSKRKFLRTPTRLFSSRDRQNSGLTPGFEPNLNEMKRVFEKFDTNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ +YR IL ALG+GS + EV KIFK VD DGDG+I+  EFMEVH+   GV+T ++++AF
Sbjct: 63  SQQDYRAILRALGKGSMVGEVPKIFKLVDLDGDGFINFKEFMEVHKKSGGVKTIDIQNAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
           +TFD+N D KISAEEVM VLK LGE+CS+E+C+RMVRAVD +GDGMVD+DEFMTMMTRS 
Sbjct: 123 QTFDLNGDGKISAEEVMEVLKRLGERCSLEECQRMVRAVDTDGDGMVDLDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270 vs. NCBI nr
Match: gi|657963113|ref|XP_008373157.1| (PREDICTED: calmodulin-like protein 1 [Malus domestica])

HSP 1 Score: 223.8 bits (569), Expect = 3.0e-55
Identity = 106/180 (58.89%), Postives = 147/180 (81.67%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N+N LD QY++ K+KFLR+PS++FSF++RQ SG+    +P+  E+K++F+ FD+N+DG+I
Sbjct: 3   NANFLDFQYNLSKRKFLRKPSQMFSFRDRQYSGIAPTFEPNPNEMKKVFEKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVH-RSGVQTGEVESAFE 123
           S+ EY+ IL ALG+G+ + EV KIFK VD D DG+I+  EFMEVH + G++T ++++AF 
Sbjct: 63  SQAEYKAILRALGKGNMIGEVPKIFKFVDLDEDGFINFKEFMEVHKKGGIRTMDIQNAFR 122

Query: 124 TFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAK 183
            FD+N D KISAEEVM VL+GL E+C++EDCRRMVRAVD +GDGMVD+DEFMTMMTRS +
Sbjct: 123 MFDLNGDGKISAEEVMEVLRGLEERCNLEDCRRMVRAVDTDGDGMVDLDEFMTMMTRSMR 182

[Close]

BLAST of CmoCh19G006270 vs. NCBI nr
Match: gi|743794489|ref|XP_011000410.1| (PREDICTED: calmodulin-like protein 1 [Populus euphratica])

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-54
Identity = 107/179 (59.78%), Postives = 142/179 (79.33%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + L+ QY + + KFLR+PSRLFS ++RQSSG+    QP+ +E++Q+F  FD+N+DG+I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGILSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+  L ALG+GS + EV KIF+ VD DGDGYID  EFME  +   G++T ++++AF
Sbjct: 63  SQQEYKATLRALGQGSMLGEVPKIFQVVDLDGDGYIDFKEFMEAQKKGGGIRTTDIQTAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD NRD KISAEEVM VL+ LGE+CS+EDCRRMV AVD +GDGMV+MDEFMTMMT+S
Sbjct: 123 QTFDSNRDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTQS 181

The following BLAST results are available for this feature:

BLAST of CmoCh19G006270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML1_ARATH	3.3e-46	52.20	Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1	[more]
CML23_ARATH	5.4e-28	42.00	Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=...	[more]
CML27_ARATH	2.0e-27	44.12	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=...	[more]
CML25_ARATH	2.7e-27	40.26	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=...	[more]
CML24_ARATH	5.9e-27	40.13	Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2	[more]

BLAST of CmoCh19G006270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K804_CUCSA	5.5e-80	84.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1	[more]
M5VNS5_PRUPE	2.3e-54	58.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1	[more]
V4SBR8_9ROSI	5.7e-53	58.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1	[more]
A0A067F0V1_CITSI	5.7e-53	58.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1	[more]
B9HS04_POPTR	7.5e-53	58.10	Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE...	[more]

BLAST of CmoCh19G006270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15680.1	1.9e-47	52.20	Calcium-binding EF-hand family protein	[more]
AT1G66400.1	3.0e-29	42.00	calmodulin like 23	[more]
AT1G18210.1	1.1e-28	44.12	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	1.5e-28	40.26	EF hand calcium-binding protein family	[more]
AT5G37770.1	3.3e-28	40.13	EF hand calcium-binding protein family	[more]

BLAST of CmoCh19G006270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109907\|ref\|XP_008454944.1\|	2.1e-80	85.87	PREDICTED: calmodulin-like protein 1 [Cucumis melo]	[more]
gi\|778725125\|ref\|XP_004137114.2\|	7.9e-80	84.78	PREDICTED: calmodulin-like protein 1 [Cucumis sativus]	[more]
gi\|764562626\|ref\|XP_011461491.1\|	7.2e-57	61.33	PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca]	[more]
gi\|657963113\|ref\|XP_008373157.1\|	3.0e-55	58.89	PREDICTED: calmodulin-like protein 1 [Malus domestica]	[more]
gi\|743794489\|ref\|XP_011000410.1\|	2.0e-54	59.78	PREDICTED: calmodulin-like protein 1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G006270.1	CmoCh19G006270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 46..106 score: 1.2E-14coord: 119..177 score: 4.1
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 47..75 score: 1.3E-4coord: 152..180 score: 0.0017coord: 116..144 score: 5.0E-4coord: 83..111 score: 1.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 79..114 score: 15.016coord: 116..147 score: 11.947coord: 43..78 score: 13.509coord: 148..183 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 45..183 score: 1.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 44..178 score: 4.7
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 161..173 score: -coord: 56..68 score: -coord: 92..104 score: -coord: 125..137 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 31..181 score: 6.7
None	No IPR available	PANTHER	PTHR10891:SF572	SUBFAMILY NOT NAMED	coord: 31..181 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G006270	CmaCh19G006090	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G006270	Cla016007	Watermelon (97103) v1	cmowmB496
CmoCh19G006270	Csa7G073720	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G006270	MELO3C018445	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G006270	ClCG02G005880	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G006270	CSPI07G07690	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G006270	Lsi03G004870	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G006270	Cp4.1LG15g04910	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G006270	MELO3C018445.2	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G006270	CsaV3_7G008650	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G006270	Cla97C02G032860	Watermelon (97103) v2	cmowmbB512
CmoCh19G006270	Bhi05G000996	Wax gourd	cmowgoB0641

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G006270	Watermelon (97103) v2	cmowmbB502
CmoCh19G006270	Watermelon (97103) v2	cmowmbB516
CmoCh19G006270	Watermelon (97103) v2	cmowmbB527
CmoCh19G006270	Wax gourd	cmowgoB0640
CmoCh19G006270	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G006270	Cucurbita moschata (Rifu)	cmocmoB352
CmoCh19G006270	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G006270	Cucurbita moschata (Rifu)	cmocmoB398
CmoCh19G006270	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G006270	Cucumber (Gy14) v1	cgycmoB0686
CmoCh19G006270	Cucurbita maxima (Rimu)	cmacmoB718
CmoCh19G006270	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G006270	Cucurbita maxima (Rimu)	cmacmoB853
CmoCh19G006270	Cucumber (Chinese Long) v2	cmocuB504
CmoCh19G006270	Melon (DHL92) v3.5.1	cmomeB473
CmoCh19G006270	Melon (DHL92) v3.5.1	cmomeB477
CmoCh19G006270	Watermelon (Charleston Gray)	cmowcgB464
CmoCh19G006270	Watermelon (97103) v1	cmowmB490
CmoCh19G006270	Cucurbita pepo (Zucchini)	cmocpeB489
CmoCh19G006270	Cucurbita pepo (Zucchini)	cmocpeB490
CmoCh19G006270	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G006270	Bottle gourd (USVL1VR-Ls)	cmolsiB460
CmoCh19G006270	Bottle gourd (USVL1VR-Ls)	cmolsiB478
CmoCh19G006270	Bottle gourd (USVL1VR-Ls)	cmolsiB482
CmoCh19G006270	Cucumber (Gy14) v2	cgybcmoB352
CmoCh19G006270	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G006270	Melon (DHL92) v3.6.1	cmomedB526
CmoCh19G006270	Melon (DHL92) v3.6.1	cmomedB547
CmoCh19G006270	Melon (DHL92) v3.6.1	cmomedB553
CmoCh19G006270	Silver-seed gourd	carcmoB0293
CmoCh19G006270	Silver-seed gourd	carcmoB0512
CmoCh19G006270	Silver-seed gourd	carcmoB0733
CmoCh19G006270	Silver-seed gourd	carcmoB1089
CmoCh19G006270	Cucumber (Chinese Long) v3	cmocucB0602
CmoCh19G006270	Cucumber (Chinese Long) v3	cmocucB0611