CmoCh19G006270.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G006270.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium binding protein
Location	Cmo_Chr19 : 6850031 .. 6851172 (+)
Sequence length	672

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGTTTAGAGGATGAGTGTTTCAACTTTTAAGGTTCTTTATGGCGTTTGATTGTTAAAAAGTGTTAGTATAATGTAAAGGCTTTGTATAAATTCCAACTTCTCTTTTAGTTAAACTGCTTCGGGTGGACCGAAACACGATAACAATGTCATTTTTTATAAGCTTACAAACACTACTTTCACTTGTAAGTTTATATGTTTTGTTACCACTTTCTTCTACTAATGTTGTAATAAACCAAGTCAAGGCTTAGAACTAGCTAGGATTCAAGTGATTCTTTCAACCTAATTGAAAATGAGGAGAAAACAAATTTCAAACCCAGTAATTACCACTGGGACGTTTTCTTTTGCTAAAAGCTTACTAATCATCTATCAGGAGAAGAAAACTAGCACTTTCCAATTCAGTTCCAACAATAAACAGCAGGAGAAGAAGGAAAAAAAAAAAAAAGGATGATAAGACGAATGATTAAATATCAGGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

mRNA sequence

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Coding sequence (CDS)

ATGCCAATGAACTCGAACCTCCTGGACCTGCAATACAGTGTCTTAAAGAAAAAGTTCCTCCGGGAACCCTCCCGTCTGTTCTCCTTCAAGAACCGACAGAGCTCAGGACTCCGGCGGGCGTTGCAGCCGAGCACGGAGGAGATAAAGCAGATCTTCAAATGGTTCGACACTAACAGAGATGGGAGGATCTCAAAGCATGAATACAGGGGAATTCTGGAGGCACTGGGGAGAGGGAGCTCCATGGAAGAGGTGCAGAAGATTTTCAAGGCAGTGGACACAGACGGCGATGGTTACATAGACTTGAACGAGTTTATGGAGGTTCACCGGAGCGGAGTTCAGACTGGAGAGGTGGAATCTGCTTTCGAGACGTTTGATGTGAATAGGGATCGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAAGGGATTGGGGGAAAAGTGTAGCATTGAGGATTGCCGGCGGATGGTCAGGGCGGTGGACAGGAACGGCGATGGCATGGTGGACATGGATGAGTTTATGACAATGATGACTCGGTCTGCAAAGTATGATAAGAAGAGCGTACATTATAAATCAATGGCTAGCTCGTCTCCAATCGGTACCTTGTTTCGTGCTTCACTTAAGGATATTGATGATCTAACACTTTACATCGAGCTGCTATTGGGAAGATAA

Homology

[Close]

BLAST of CmoCh19G006270.1 vs. Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-46
Identity = 95/182 (52.20%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRA-----LQPSTEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS  E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+ID  EF++ ++   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+N D KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of CmoCh19G006270.1 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 34  SSGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDT 93
           S  + R    S E+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYIDLNEFMEVHRSGVQTG------EVESAFETFDVNRDRKISAEEVMRVLKGLGEK 153
           DG+G+IDL+EF+ + +   Q+       +++ AF+ +D++R+ +ISA E+  V+K LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDRNGDGMVDMDEFMTMM 178
           CSI+DC+RM+  VD +GDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of CmoCh19G006270.1 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYI+L+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGVQTGEVESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF+ +D +++  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]

BLAST of CmoCh19G006270.1 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 37  LRRALQPSTE--EIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 96
           L++A    TE  E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  
Sbjct: 25  LQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRK 84

Query: 97  GDGYIDLNEFMEVHRSGVQTGEV----ESAFETFDVNRDRKISAEEVMRVLKGLGEKCSI 156
           GDGYI+  EF+E++  G+   +V    + AF  +D++ +  ISAEE+  VL+ LG++CSI
Sbjct: 85  GDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSI 144

Query: 157 EDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAKYD 185
            +CR+M+  VD++GDG +D +EF  MMT  ++ D
Sbjct: 145 AECRKMIGGVDKDGDGTIDFEEFKIMMTMGSRRD 178

[Close]

BLAST of CmoCh19G006270.1 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 5.9e-27
Identity = 61/152 (40.13%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 35  SGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ R+   S ++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYIDLNEFMEVHRSGVQTG--------EVESAFETFDVNRDRKISAEEVMRVLKGLGE 154
           G+G+IDL+EF+ + + G+  G        +++ AFE +D++ + +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 179
           KCS++DC++M+  VD +GDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]

BLAST of CmoCh19G006270.1 vs. TrEMBL
Match: A0A0A0K804_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.5e-80
Identity = 156/184 (84.78%), Postives = 172/184 (93.48%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS+EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270.1 vs. TrEMBL
Match: M5VNS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 105/181 (58.01%), Postives = 146/181 (80.66%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           ++N LD QY++ K+KFLR+PS +FSF++RQ+SG+  + +P+  E+K++F  FD+N+DG+I
Sbjct: 3   SANFLDFQYNLSKRKFLRKPSHVFSFRDRQNSGVSPSFEPNPNEMKRVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL ALG+G+ + EV KIF+  D DGDG+I+  EFMEVH+   G++T ++++AF
Sbjct: 63  SQPEYKAILRALGKGNMVGEVPKIFRIADLDGDGFINFKEFMEVHKKGGGIRTIDIQNAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD+N D KISAEEVM VL  LGE CS+EDC+RMVRAVD +GDG+VD+DEFMTMMTRS 
Sbjct: 123 RTFDLNGDGKISAEEVMEVLGRLGESCSLEDCQRMVRAVDTDGDGVVDIDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270.1 vs. TrEMBL
Match: V4SBR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 105/181 (58.01%), Postives = 138/181 (76.24%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+ID  EFME H+   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS 
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270.1 vs. TrEMBL
Match: A0A067F0V1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 105/181 (58.01%), Postives = 138/181 (76.24%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY + K KFLR+PSRLFS ++RQ+S L    Q    E+K++F  FD+N+DG+I
Sbjct: 3   NLSFLDFQYKISKNKFLRKPSRLFSSRDRQNSSLLPTFQADRNEMKRVFDRFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+ IL A+G+ S + EV KIF+ VD DGDG+ID  EFME H+   G++T +++SAF
Sbjct: 63  SQMEYKAILRAIGQASMISEVPKIFQVVDLDGDGFIDFKEFMEAHKKGGGIRTMDIQSAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
            TFD N D KISAEE++ +L+ LGE CS+EDCR+MVRAVD +GDGMV+MDEFMTMMTRS 
Sbjct: 123 RTFDKNDDGKISAEEILEMLRRLGESCSLEDCRKMVRAVDTDGDGMVNMDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270.1 vs. TrEMBL
Match: B9HS04_POPTR (Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-53
Identity = 104/179 (58.10%), Postives = 141/179 (78.77%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + L+ QY + + KFLR+PSRLFS ++RQSSG+    QP+ +E++Q+F  FD+N+DG+I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGMLSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+  L ALG+G+ + EV KIF+ VD DGDG+ID  EF+E  +   G++T ++++AF
Sbjct: 63  SQQEYKDTLRALGQGNMLGEVPKIFQVVDLDGDGFIDFKEFVEAQKKGGGIRTTDIQTAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD N D KISAEEVM VL+ LGE+CS+EDCRRMV AVD +GDGMV+MDEFMTMMTRS
Sbjct: 123 QTFDSNGDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTRS 181

[Close]

BLAST of CmoCh19G006270.1 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-47
Identity = 95/182 (52.20%), Postives = 137/182 (75.27%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRA-----LQPSTEEIKQIFKWFDTN 63
           N + L+LQY + K K LR+PSR+FS ++RQSSGL         QPS  E++++F  FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGE 123
           +DG+IS+ EY+ +L ALG+  ++E+V KIFKAVD DGDG+ID  EF++ ++   G+++ +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTM 179
           + ++F TFD+N D KISAEEVM VL  LGE+CS+EDC RMVRAVD +GDG+V+M+EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of CmoCh19G006270.1 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 1


Query: 34  SSGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDT 93
           S  + R    S E+IK++F+ FD N DG+IS  E + ++ AL   +S EE + + K  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYIDLNEFMEVHRSGVQTG------EVESAFETFDVNRDRKISAEEVMRVLKGLGEK 153
           DG+G+IDL+EF+ + +   Q+       +++ AF+ +D++R+ +ISA E+  V+K LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRRMVRAVDRNGDGMVDMDEFMTMM 178
           CSI+DC+RM+  VD +GDG VD +EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of CmoCh19G006270.1 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 46  EEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFM 105
           EE+K++F  FD+N DG+IS  E  G+ +A+G   +  E+ ++ + VDTD DGYI+L+EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EVHRSGVQTGEVESAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGD 165
            + RS     E+  AF+ +D +++  ISA E+ +VL  LG  CS+EDC RM+  VD +GD
Sbjct: 82  TLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGD 141

Query: 166 GMVDMDEFMTMMTRSA 182
           G V+ +EF  MMT S+
Sbjct: 142 GNVNFEEFQKMMTSSS 157

[Close]

BLAST of CmoCh19G006270.1 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 37  LRRALQPSTE--EIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 96
           L++A    TE  E++ +FK FD N DG+IS  E   I+ +LG     EE++K    +D  
Sbjct: 25  LQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRK 84

Query: 97  GDGYIDLNEFMEVHRSGVQTGEV----ESAFETFDVNRDRKISAEEVMRVLKGLGEKCSI 156
           GDGYI+  EF+E++  G+   +V    + AF  +D++ +  ISAEE+  VL+ LG++CSI
Sbjct: 85  GDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSI 144

Query: 157 EDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAKYD 185
            +CR+M+  VD++GDG +D +EF  MMT  ++ D
Sbjct: 145 AECRKMIGGVDKDGDGTIDFEEFKIMMTMGSRRD 178

[Close]

BLAST of CmoCh19G006270.1 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 61/152 (40.13%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 35  SGLRRALQPSTEEIKQIFKWFDTNRDGRISKHEYRGILEALGRGSSMEEVQKIFKAVDTD 94
           +G+ R+   S ++IK++F+ FD N DG+IS  E + ++ AL   +S EE   + K  D D
Sbjct: 5   NGVVRSCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLD 64

Query: 95  GDGYIDLNEFMEVHRSGVQTG--------EVESAFETFDVNRDRKISAEEVMRVLKGLGE 154
           G+G+IDL+EF+ + + G+  G        +++ AFE +D++ + +ISA+E+  V+K LGE
Sbjct: 65  GNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGE 124

Query: 155 KCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 179
           KCS++DC++M+  VD +GDG V+ DEF  MM+
Sbjct: 125 KCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156

[Close]

BLAST of CmoCh19G006270.1 vs. NCBI nr
Match: gi|659109907|ref|XP_008454944.1| (PREDICTED: calmodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 2.1e-80
Identity = 158/184 (85.87%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N LDLQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRGSSMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270.1 vs. NCBI nr
Match: gi|778725125|ref|XP_004137114.2| (PREDICTED: calmodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 7.9e-80
Identity = 156/184 (84.78%), Postives = 172/184 (93.48%), Query Frame = 1


Query: 1   MPMNSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRD 60
           MP+N N L+LQY+V KKKFLREPSRLFSFK+RQSSGLRRALQPS+EEIKQIF  FDTN+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHRS--GVQTGEVE 120
           GRISKHEYRGIL+ALGRG+SMEEVQKIF+AVD+DGDGYI+LNEFMEVHRS  GVQ  EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 SAFETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMT 180
            AF+TFD+N DRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVD +GDGMVD++EFMTMMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 RSAK 183
           RSAK
Sbjct: 181 RSAK 184

[Close]

BLAST of CmoCh19G006270.1 vs. NCBI nr
Match: gi|764562626|ref|XP_011461491.1| (PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 229.2 bits (583), Expect = 7.2e-57
Identity = 111/181 (61.33%), Postives = 148/181 (81.77%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + LD QY++ K+KFLR P+RLFS ++RQ+SGL    +P+  E+K++F+ FDTN+DG+I
Sbjct: 3   NMSFLDFQYNLSKRKFLRTPTRLFSSRDRQNSGLTPGFEPNLNEMKRVFEKFDTNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ +YR IL ALG+GS + EV KIFK VD DGDG+I+  EFMEVH+   GV+T ++++AF
Sbjct: 63  SQQDYRAILRALGKGSMVGEVPKIFKLVDLDGDGFINFKEFMEVHKKSGGVKTIDIQNAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSA 183
           +TFD+N D KISAEEVM VLK LGE+CS+E+C+RMVRAVD +GDGMVD+DEFMTMMTRS 
Sbjct: 123 QTFDLNGDGKISAEEVMEVLKRLGERCSLEECQRMVRAVDTDGDGMVDLDEFMTMMTRSM 182

[Close]

BLAST of CmoCh19G006270.1 vs. NCBI nr
Match: gi|657963113|ref|XP_008373157.1| (PREDICTED: calmodulin-like protein 1 [Malus domestica])

HSP 1 Score: 223.8 bits (569), Expect = 3.0e-55
Identity = 106/180 (58.89%), Postives = 147/180 (81.67%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N+N LD QY++ K+KFLR+PS++FSF++RQ SG+    +P+  E+K++F+ FD+N+DG+I
Sbjct: 3   NANFLDFQYNLSKRKFLRKPSQMFSFRDRQYSGIAPTFEPNPNEMKKVFEKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVH-RSGVQTGEVESAFE 123
           S+ EY+ IL ALG+G+ + EV KIFK VD D DG+I+  EFMEVH + G++T ++++AF 
Sbjct: 63  SQAEYKAILRALGKGNMIGEVPKIFKFVDLDEDGFINFKEFMEVHKKGGIRTMDIQNAFR 122

Query: 124 TFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRSAK 183
            FD+N D KISAEEVM VL+GL E+C++EDCRRMVRAVD +GDGMVD+DEFMTMMTRS +
Sbjct: 123 MFDLNGDGKISAEEVMEVLRGLEERCNLEDCRRMVRAVDTDGDGMVDLDEFMTMMTRSMR 182

[Close]

BLAST of CmoCh19G006270.1 vs. NCBI nr
Match: gi|743794489|ref|XP_011000410.1| (PREDICTED: calmodulin-like protein 1 [Populus euphratica])

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-54
Identity = 107/179 (59.78%), Postives = 142/179 (79.33%), Query Frame = 1


Query: 4   NSNLLDLQYSVLKKKFLREPSRLFSFKNRQSSGLRRALQPSTEEIKQIFKWFDTNRDGRI 63
           N + L+ QY + + KFLR+PSRLFS ++RQSSG+    QP+ +E++Q+F  FD+N+DG+I
Sbjct: 3   NLSFLEFQYKLSRNKFLRKPSRLFSSRDRQSSGILSTFQPNMKEMRQVFDKFDSNKDGKI 62

Query: 64  SKHEYRGILEALGRGSSMEEVQKIFKAVDTDGDGYIDLNEFMEVHR--SGVQTGEVESAF 123
           S+ EY+  L ALG+GS + EV KIF+ VD DGDGYID  EFME  +   G++T ++++AF
Sbjct: 63  SQQEYKATLRALGQGSMLGEVPKIFQVVDLDGDGYIDFKEFMEAQKKGGGIRTTDIQTAF 122

Query: 124 ETFDVNRDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDRNGDGMVDMDEFMTMMTRS 181
           +TFD NRD KISAEEVM VL+ LGE+CS+EDCRRMV AVD +GDGMV+MDEFMTMMT+S
Sbjct: 123 QTFDSNRDGKISAEEVMEVLRRLGERCSLEDCRRMVNAVDIDGDGMVNMDEFMTMMTQS 181

The following BLAST results are available for this feature:

BLAST of CmoCh19G006270.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML1_ARATH	3.3e-46	52.20	Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1	[more]
CML23_ARATH	5.4e-28	42.00	Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=...	[more]
CML27_ARATH	2.0e-27	44.12	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=...	[more]
CML25_ARATH	2.7e-27	40.26	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=...	[more]
CML24_ARATH	5.9e-27	40.13	Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2	[more]

BLAST of CmoCh19G006270.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K804_CUCSA	5.5e-80	84.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073720 PE=4 SV=1	[more]
M5VNS5_PRUPE	2.3e-54	58.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011990mg PE=4 SV=1	[more]
V4SBR8_9ROSI	5.7e-53	58.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029360mg PE=4 SV=1	[more]
A0A067F0V1_CITSI	5.7e-53	58.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041237mg PE=4 SV=1	[more]
B9HS04_POPTR	7.5e-53	58.10	Calmodulin-related family protein OS=Populus trichocarpa GN=POPTR_0009s10530g PE...	[more]

BLAST of CmoCh19G006270.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15680.1	1.9e-47	52.20	Calcium-binding EF-hand family protein	[more]
AT1G66400.1	3.0e-29	42.00	calmodulin like 23	[more]
AT1G18210.1	1.1e-28	44.12	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	1.5e-28	40.26	EF hand calcium-binding protein family	[more]
AT5G37770.1	3.3e-28	40.13	EF hand calcium-binding protein family	[more]

BLAST of CmoCh19G006270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109907\|ref\|XP_008454944.1\|	2.1e-80	85.87	PREDICTED: calmodulin-like protein 1 [Cucumis melo]	[more]
gi\|778725125\|ref\|XP_004137114.2\|	7.9e-80	84.78	PREDICTED: calmodulin-like protein 1 [Cucumis sativus]	[more]
gi\|764562626\|ref\|XP_011461491.1\|	7.2e-57	61.33	PREDICTED: calmodulin-like protein 1 [Fragaria vesca subsp. vesca]	[more]
gi\|657963113\|ref\|XP_008373157.1\|	3.0e-55	58.89	PREDICTED: calmodulin-like protein 1 [Malus domestica]	[more]
gi\|743794489\|ref\|XP_011000410.1\|	2.0e-54	59.78	PREDICTED: calmodulin-like protein 1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005509	calcium ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh19G006270	CmoCh19G006270	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006270.1	CmoCh19G006270.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006270.1.exon.1	CmoCh19G006270.1.exon.1	exon
CmoCh19G006270.1.exon.2	CmoCh19G006270.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006270.1.CDS.1	CmoCh19G006270.1.CDS.1	CDS
CmoCh19G006270.1.CDS.2	CmoCh19G006270.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 46..106 score: 1.2E-14coord: 119..177 score: 4.1
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 47..75 score: 1.3E-4coord: 152..180 score: 0.0017coord: 116..144 score: 5.0E-4coord: 83..111 score: 1.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 79..114 score: 15.016coord: 116..147 score: 11.947coord: 43..78 score: 13.509coord: 148..183 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 45..183 score: 1.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 44..178 score: 4.7
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 161..173 score: -coord: 56..68 score: -coord: 92..104 score: -coord: 125..137 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 31..181 score: 6.7
None	No IPR available	PANTHER	PTHR10891:SF572	SUBFAMILY NOT NAMED	coord: 31..181 score: 6.7