CmaCh16G002600 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G002600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ribonuclease 2
Location	Cma_Chr16 : 1219791 .. 1221903 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTCACGTTCAAAGCGGCGGCGCAGGTGGTGTTTATGGTTCTTGCTGTTACTCTTCCGCCGCAGGCGGTGGAGGGCCTCACCGTCGGCAAGGAGCAGAGGGAATTTGACTACTTTGTGTTGGCTCTTCAATGGCCAGGCTCTTCCTGCAGAAACGTAAGCATGTGCTGCCCCACCAATGGTTGCTGCCACCGGTGAGAGTTTCATCCATATTCTCGTAGTACCTGAAATGTTTCCGATCGTGTCGTGACCTTTTATTATCGAGCTAATGACGTTCTTGTTGTGCATGGCTCTCTAGAGCTGAATTGCCCGCAGAGTTTACAATCCGTAAGTGTGAAAGAAAAGAAGAAGCTTTTACTTTTTAACCTAACCCAACATGGTCCGTTCACCGCTAAGTAAAGAAAGTGTTTGAAAATGAGGCATGCAGATGGGCTTTGGCCTCAATATCAAGACAAAGGGTGGCCTTCATGTTGTACTAATGAAACCTTTAACGAAAATGAGGTTATTTTCTCTTACTCTTTCTCAAAATTAGGGTTTATTATACCAAAATATTGACGAACCTGTGAACCGTACTATTTCTTTAAACCTTGTAGGTTAGTTCCTTGTTTGAGGATCTTGAGCGCTACTGGCCAAGCTATCGGTGTGGTCTTGTGAGCAGCTGCAGTAACAGAAAAGGATCATTTTGGGCTCACCAGGTTCAAATCCTATAATTTTGGTTCACTAAGTTTGATTTAGGGCTATGAGTTATCAAACTCGATCAATCACGACAACCCATCTTAAAATTAAAATGTCGAGTTTGAAAATTCAGATAGCTAGATATTTACTTAAGTCAAATTTCAGGAGTCAAAAGTATATCTTTCCCGAGTCTCAATCTCTCTCGGTTGTTTCTTCCTTAGTTGAGTATGAAAATTCCGTGACTGAATCTCGAAATTCTCTCTTTTTCTCGGGTTATTATATGATGGGCCATATGACATGATACCTTTGATGCAGTATGGTATGTTTTTTTCTCCTTTCAAAAATATATTTTTGGGAGAAAAAAAAAACACATTTAAAATACAATTTATTTTTGTGCAGAGAAGCATGGAACATGTGGATCACCTGTAATCCTCCACCAATATGATTACTTCTTCACAACTCTCGCCCTTTTCTTTAACTACAATGTCACTGTAAGCTCTTATAAACCTCTCTCAAATGGGTGTTTATGTGTGCCTTCTTTTCGATGCATAGCTCGGGTAGTAATTCGCTGAAACAAACGAGAAATTATTGTAAGAATTCAGCCACGATCCCCACAAAAAGATACATAGAGAATTTTGATGATTGAAATAGGAGGTGAGAACGAGGACAGTAAAAGCTTTCTTGTTGTCTTTTATCTTCTACGATTATCGATTTTCGACTGTTAAAATCTCAGGAAGCTTTGGAGGAAGCTGACATTATAGCTTCAGATACCAAAAAGTATGGTATTGAGGATGTGTTTAGAGCTGTTCGGTCTGCTTTCAAAGCGAATCCAAAGATTACATGCGGTAAAAAAGGGATTATTAAGGAACTTCGTCTATGCTTTGATAAAGAATTCCAGGTATATATTACTTTTGTCTCTATAAAAACACCTTAGTTTGTTAAGCATGTCTGTATGTTTTTTCCGTAAAGGGTAACGGAAATGGGAGAGTACTTACTAGTTTCCATCCAATATTAACGATTTGAGGAACGTAAATCGTTTATTCATTGCAGCTAATCGATTGTGATGCTACAAAATCATGCCCCAAATTTGTTTCGCTCCCAGAATTTCATGAATTATCAAGTAAGTTTCTAATATTTCTTTTAAGTGTGCCTATCACATATGTATCATAGTTGGTATTTTTGTTAAATTATCACTATACCTGACTAAATAGAACACCGATGCTAAAATTGAAGAGATTAGAACGAAGATAACACATCTAATTCTTTGATAATACGACAGATTATTTCATTAAACGTCAATATTCAAATTAATAATGTACATATTTATGTAATTAAGGTTGCTTTCGTTTGCATTTATATTGTGTGTATTGCAGAGCCTGCCATGGTTAAGAGAGCAATTCCAAGAATGATTGATGTCGAAGCAATTATGTAG

mRNA sequence

ATGGCTTCTTTCACGTTCAAAGCGGCGGCGCAGGTGGTGTTTATGGTTCTTGCTGTTACTCTTCCGCCGCAGGCGGTGGAGGGCCTCACCGTCGGCAAGGAGCAGAGGGAATTTGACTACTTTGTGTTGGCTCTTCAATGGCCAGGCTCTTCCTGCAGAAACGTAAGCATGTGCTGCCCCACCAATGGTTGCTGCCACCGAGCTGAATTGCCCGCAGAGTTTACAATCCATGGGCTTTGGCCTCAATATCAAGACAAAGGGTGGCCTTCATGTTGTACTAATGAAACCTTTAACGAAAATGAGGTTAGTTCCTTGTTTGAGGATCTTGAGCGCTACTGGCCAAGCTATCGGTGTGGTCTTGTGAGCAGCTGCAAGAAGCATGGAACATGTGGATCACCTGTAATCCTCCACCAATATGATTACTTCTTCACAACTCTCGCCCTTTTCTTTAACTACAATGTCACTGAAGCTTTGGAGGAAGCTGACATTATAGCTTCAGATACCAAAAAGTATGGTATTGAGGATGTGTTTAGAGCTGTTCGGTCTGCTTTCAAAGCGAATCCAAAGATTACATGCGGTAAAAAAGGGATTATTAAGGAACTTCGTCTATGCTTTGATAAAGAATTCCAGCTAATCGATTGTGATGCTACAAAATCATGCCCCAAATTTGTTTCGCTCCCAGAATTTCATGAATTATCAAAGCCTGCCATGGTTAAGAGAGCAATTCCAAGAATGATTGATGTCGAAGCAATTATGTAG

Coding sequence (CDS)

ATGGCTTCTTTCACGTTCAAAGCGGCGGCGCAGGTGGTGTTTATGGTTCTTGCTGTTACTCTTCCGCCGCAGGCGGTGGAGGGCCTCACCGTCGGCAAGGAGCAGAGGGAATTTGACTACTTTGTGTTGGCTCTTCAATGGCCAGGCTCTTCCTGCAGAAACGTAAGCATGTGCTGCCCCACCAATGGTTGCTGCCACCGAGCTGAATTGCCCGCAGAGTTTACAATCCATGGGCTTTGGCCTCAATATCAAGACAAAGGGTGGCCTTCATGTTGTACTAATGAAACCTTTAACGAAAATGAGGTTAGTTCCTTGTTTGAGGATCTTGAGCGCTACTGGCCAAGCTATCGGTGTGGTCTTGTGAGCAGCTGCAAGAAGCATGGAACATGTGGATCACCTGTAATCCTCCACCAATATGATTACTTCTTCACAACTCTCGCCCTTTTCTTTAACTACAATGTCACTGAAGCTTTGGAGGAAGCTGACATTATAGCTTCAGATACCAAAAAGTATGGTATTGAGGATGTGTTTAGAGCTGTTCGGTCTGCTTTCAAAGCGAATCCAAAGATTACATGCGGTAAAAAAGGGATTATTAAGGAACTTCGTCTATGCTTTGATAAAGAATTCCAGCTAATCGATTGTGATGCTACAAAATCATGCCCCAAATTTGTTTCGCTCCCAGAATTTCATGAATTATCAAAGCCTGCCATGGTTAAGAGAGCAATTCCAAGAATGATTGATGTCGAAGCAATTATGTAG

Protein sequence

MASFTFKAAAQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELPAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSCKKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHELSKPAMVKRAIPRMIDVEAIM

Homology

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BLAST of CmaCh16G002600 vs. Swiss-Prot
Match: RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.3e-61
Identity = 108/249 (43.37%), Postives = 152/249 (61.04%), Query Frame = 1


Query: 8   AAAQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHR 67
           A+   + +++A      A + + + + QREFDYF L+LQWPG+ CR    CC  N CC  
Sbjct: 2   ASRLCLLLLVACIAGAFAGDVIELNRSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRG 61

Query: 68  AELPAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC--- 127
           ++ P +FTIHGLWP Y D  WPSCC    F E E+S+L + LE+YWPS  CG  SSC   
Sbjct: 62  SDAPTQFTIHGLWPDYNDGSWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGG 121

Query: 128 ---------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIED 187
                    +KHGTC SPV   +Y+YF TTL L+  +NVT+ L +A  +AS+++KY +  
Sbjct: 122 KGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGG 181

Query: 188 VFRAVRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDC------DATKSCPKFVSLPEF 239
           +  A+++AF   P++ C K+  I E+R+CF K+F+  DC       + KSCPK+VSLPE+
Sbjct: 182 IVTAIQNAFHITPEVVC-KRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEY 241

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BLAST of CmaCh16G002600 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.8e-25
Identity = 74/221 (33.48%), Postives = 103/221 (46.61%), Query Frame = 1


Query: 25  AVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCC-PTNGCCHRAELPAEFTIHGLWPQY 84
           A++ L V    ++FD+F   LQWPG+ C +   CC P  G     +  A+F IHGLWP Y
Sbjct: 9   ALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTG-----KPAADFGIHGLWPNY 68

Query: 85  QDKGWPSCCTNET-FNENEVSSLFEDLERYWPSYRCGLVSSCK-------KHGTCGSPVI 144
           +  GWP  C  ++ F++  VS L  DL+R WP+  C      K       KHGTC     
Sbjct: 69  KTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESE- 128

Query: 145 LHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGK- 204
           L Q+DYF   L L    N+  AL  A  I  D K Y ++D+   ++      P I C K 
Sbjct: 129 LDQHDYFEAGLKLKQKANLLHALTNAG-IKPDDKFYEMKDIENTIKQVVGFAPGIECNKD 188

Query: 205 ---KGIIKELRLCFD-KEFQLIDCDATK--SCPKFVSLPEF 230
                 + ++ LC D    + I+C       C   V  P+F
Sbjct: 189 SSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222

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BLAST of CmaCh16G002600 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.1e-24
Identity = 71/235 (30.21%), Postives = 108/235 (45.96%), Query Frame = 1


Query: 10  AQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAE 69
           A +  + L V LP       +      +FD+F    QWPGS C     CC  N      +
Sbjct: 6   ASLCLISLLVILPSV----FSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNS----GK 65

Query: 70  LPAEFTIHGLWPQYQDKGWPS-CCTNETFNENEVSSLFEDLERYWPSYRCGLVS------ 129
             A+F IHGLWP Y+D  +PS C  ++ F+ + +S L   +++ WP+  C   S      
Sbjct: 66  PAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWE 125

Query: 130 -SCKKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVR 189
              +KHGTC   VI  Q++YF T L L    N+  AL +A  I  D K Y +E +  +++
Sbjct: 126 HEWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG-INPDGKSYSLESIRDSIK 185

Query: 190 SAFKANPKITCGKKGI----IKELRLCFDKEFQ-LIDCDATK--SCPKFVSLPEF 230
            +    P + C + G     + ++ LC D+    LI+C       C   +  P F
Sbjct: 186 ESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

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BLAST of CmaCh16G002600 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 67/211 (31.75%), Postives = 94/211 (44.55%), Query Frame = 1


Query: 36  REFDYFVLALQWPGSSCRNVSMCC-PTNGCCHRAELPAEFTIHGLWPQYQDKGWPSCCTN 95
           ++FD+F    QWP S C     CC PT G     +   +F+IHGLWP Y+D  WP  C  
Sbjct: 26  QDFDFFYFVQQWPASYCDTRRSCCYPTTG-----KPDEDFSIHGLWPNYKDGKWPQNCDR 85

Query: 96  E-TFNENEVSSLFEDLERYWPSYRCGLVSSCK-------KHGTCGSPVILHQYDYFFTTL 155
           E + +E+E S L   +E+ WPS  C      K       KHGTC +   L+Q+ YF T L
Sbjct: 86  ESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCSA---LNQHAYFQTAL 145

Query: 156 ALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGKKG----IIKELR 215
                 N+ + L  A I   +   YG+E + +A+       P I C         + ++ 
Sbjct: 146 DFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVY 205

Query: 216 LCFDKE-FQLIDCDATK---SCPKFVSLPEF 230
           LC D    + IDC        C   +  P F
Sbjct: 206 LCVDSSASKFIDCPIFPHGGKCGSKIEFPSF 228

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BLAST of CmaCh16G002600 vs. Swiss-Prot
Match: RNDI_DICDI (Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 67/220 (30.45%), Postives = 100/220 (45.45%), Query Frame = 1


Query: 16  VLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELPAEFT 75
           VL +    Q+   +    +  +FD+++   QW       +   C +  C    E  A FT
Sbjct: 10  VLLIASTAQSTVTIYESSKPGDFDFYLFVQQW-------IYSYCDSQTCIQNKEREA-FT 69

Query: 76  IHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCG----LVSSCKKHGTCG 135
           IHGLWP+  D  +PS C+  +FN N +  L + L   WPS              KHGTC 
Sbjct: 70  IHGLWPENSDGSYPSFCSGPSFNVNAIQDLEDQLNFDWPSLTGPNTDFWTHEFSKHGTCS 129

Query: 136 -SPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKI 195
            +  I   +DYF T + L+  +N+T ALE  +I  SD+  Y   D+  A+ + F   P I
Sbjct: 130 ITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAITTHFGGKPGI 189

Query: 196 TCGKKGIIKELRLCFDK-EFQLIDCDATK--SCPKFVSLP 228
            C   G +  + +C DK    ++DC   +  SC   V  P
Sbjct: 190 QC-SSGQLSTVAVCIDKNSLSIMDCPDLQGWSCSGSVKFP 220

[Close]

BLAST of CmaCh16G002600 vs. TrEMBL
Match: A0A0A0KVR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109040 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-92
Identity = 154/232 (66.38%), Postives = 183/232 (78.88%), Query Frame = 1


Query: 12  VVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELP 71
           VV +V+ + +      G TVGKEQREFDYF+LALQWP +SC NV++CC TN CC RA  P
Sbjct: 12  VVVVVIGIVVVVVDGGGFTVGKEQREFDYFILALQWPSTSCTNVTVCCTTNACCRRAVSP 71

Query: 72  AEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC------- 131
            EFTIHGLWP+Y+ KGWPSCCTNETF+E ++ SLFED+++YWP+YRCGLVSSC       
Sbjct: 72  TEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLVSSCDNRKGSF 131

Query: 132 -----KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRA 191
                +KHGTCGSPVIL +YDYF TTL LF+ YNVTEALE A+I+ASDTKKY I+DV  A
Sbjct: 132 WAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTKKYPIQDVLNA 191

Query: 192 VRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHE 232
           V SAFK NPK+ C KKGIIKE+ LCFDK+F+L DCDATKSCPK V LP+FH+
Sbjct: 192 VHSAFKVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPKFHK 243

[Close]

BLAST of CmaCh16G002600 vs. TrEMBL
Match: A0A0A0L0P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109540 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.5e-78
Identity = 142/269 (52.79%), Postives = 184/269 (68.40%), Query Frame = 1


Query: 1   MASFTFKAAAQVVFMVLAVTLPPQAVEGLTV----GKEQREFDYFVLALQWPGSSCRNVS 60
           MAS + KA A +VF+V+ +      V G +       EQREFDYFVLALQWPGSSC+N  
Sbjct: 1   MASLSIKAKA-MVFVVVVLLQLLTVVFGFSAEAPSSSEQREFDYFVLALQWPGSSCKNPG 60

Query: 61  MCCPTNGCCHRAELPAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSY 120
            CCP+N CC  AE P EFTIHGLWPQY +KGWPSCCT+ +FNENE++ L ED+++YWP+Y
Sbjct: 61  KCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTDASFNENEINILTEDIQKYWPTY 120

Query: 121 RCGLVSSC------------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADII 180
           RCG  S+C            +KHGTC +PVI+ +YDYF TT+ +F  YNVT+ L +A  +
Sbjct: 121 RCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFV 180

Query: 181 ASDTKKYGIEDVFRAVRSAF-KANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKF 240
           AS+T+KY IEDV  A+++ F  A PKI+C KKG +KEL LCFDK F+  DC+   SCP F
Sbjct: 181 ASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDF 240

Query: 241 VSLPEFHELSKPAMVKRAIPRMIDVEAIM 253
           +  P + E  +P  V+ AIP + DVE I+
Sbjct: 241 IKFPTY-EPQEPNKVEGAIPWIADVEEII 267

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BLAST of CmaCh16G002600 vs. TrEMBL
Match: C4PD01_CITMA (S-like RNase OS=Citrus maxima PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-62
Identity = 110/219 (50.23%), Postives = 139/219 (63.47%), Query Frame = 1


Query: 34  EQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELPAEFTIHGLWPQYQDKGWPSCCT 93
           EQREFDYF  ALQWPG+ C+N   CCP+NGCC  +  P EFTIHGLWP Y D  WPSCC 
Sbjct: 40  EQREFDYFNFALQWPGTQCKNTRHCCPSNGCCRGSNAPTEFTIHGLWPDYNDGTWPSCCK 99

Query: 94  NETFNENEVSSLFEDLERYWPSYRCGLVSSC------------KKHGTCGSPVILHQYDY 153
              F+E E+S+L + LE+YWPSYRCG  S+C            +KHGTC  PV+  +Y Y
Sbjct: 100 KSKFDEKEISTLLDALEKYWPSYRCGSTSTCYSGEGLFWAHEWEKHGTCSFPVVRDEYSY 159

Query: 154 FFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGKKGIIKEL 213
           F TTL L+F YNVT  L EA  + S+T+KY +  +  A+++AF A PK+ C K G + EL
Sbjct: 160 FSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-GAVNEL 219

Query: 214 RLCFDKEFQLIDC-----------DATKSCPKFVSLPEF 230
            LCF K+F+  DC            ++ SCPKFVSLP +
Sbjct: 220 HLCFYKDFKPRDCIIERSPENDNYFSSSSCPKFVSLPVY 257

[Close]

BLAST of CmaCh16G002600 vs. TrEMBL
Match: D0VUS4_CITMA (S-like RNase OS=Citrus maxima PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.8e-62
Identity = 110/219 (50.23%), Postives = 139/219 (63.47%), Query Frame = 1


Query: 34  EQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELPAEFTIHGLWPQYQDKGWPSCCT 93
           EQREFDYF  ALQWPG+ C+N   CCP+NGCC  +  P EFTIHGLWP Y D  WPSCC 
Sbjct: 40  EQREFDYFNFALQWPGTQCKNTRHCCPSNGCCRGSNAPTEFTIHGLWPDYNDGTWPSCCK 99

Query: 94  NETFNENEVSSLFEDLERYWPSYRCGLVSSC------------KKHGTCGSPVILHQYDY 153
              F+E E+S+L + LE+YWPSYRCG  S+C            +KHGTC  PV+  +Y Y
Sbjct: 100 KSKFDEKEISTLLDALEKYWPSYRCGSTSTCYSGEGLFWAHEVEKHGTCSFPVVRDEYSY 159

Query: 154 FFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGKKGIIKEL 213
           F TTL L+F YNVT  L EA  + S+T+KY +  +  A+++AF A PK+ C K   + EL
Sbjct: 160 FSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDA-VNEL 219

Query: 214 RLCFDKEFQLIDC-----------DATKSCPKFVSLPEF 230
           RLCF K+F+  DC            ++ SCPKFVSLP +
Sbjct: 220 RLCFYKDFKPRDCIIERSPENDNYFSSSSCPKFVSLPVY 257

[Close]

BLAST of CmaCh16G002600 vs. TrEMBL
Match: A0A162A2W5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018604 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61
Identity = 113/261 (43.30%), Postives = 158/261 (60.54%), Query Frame = 1


Query: 8   AAAQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHR 67
           +A+ ++ ++ +  + P    G  + KEQREFDYF L+LQWPG+ CRN   CC +NGCC  
Sbjct: 11  SASLLIVLIGSFFIEPINAGGFNIVKEQREFDYFKLSLQWPGTVCRNTRHCCASNGCCRG 70

Query: 68  AELPAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC--- 127
           +  P EFTIHGLWP Y D  WP+CCT   F+  E+S+L + LE+YWPSY C   S+C   
Sbjct: 71  SNSPTEFTIHGLWPDYNDGTWPACCTKSGFDVKEISTLKDALEKYWPSYSCSKASTCSGK 130

Query: 128 ---------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIED 187
                    +KHGTC SPV+  +Y YF TTL ++F +NVTE L EA  + S+++KY +  
Sbjct: 131 KGLFWAHEWEKHGTCSSPVVKDEYSYFITTLNVYFKFNVTEVLYEAGYVPSNSEKYPMGG 190

Query: 188 VFRAVRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDC-------------DATKSCPK 244
           +  A+++AF A P+ITC  +G ++ELRLCF K+F+  DC              +  SCPK
Sbjct: 191 IISAIQNAFHATPEITC-SQGAVEELRLCFYKDFKPRDCAIGLGSSHHNGLSSSKSSCPK 250

[Close]

BLAST of CmaCh16G002600 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 235.0 bits (598), Expect = 5.2e-62
Identity = 108/249 (43.37%), Postives = 152/249 (61.04%), Query Frame = 1


Query: 8   AAAQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHR 67
           A+   + +++A      A + + + + QREFDYF L+LQWPG+ CR    CC  N CC  
Sbjct: 2   ASRLCLLLLVACIAGAFAGDVIELNRSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRG 61

Query: 68  AELPAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC--- 127
           ++ P +FTIHGLWP Y D  WPSCC    F E E+S+L + LE+YWPS  CG  SSC   
Sbjct: 62  SDAPTQFTIHGLWPDYNDGSWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGG 121

Query: 128 ---------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIED 187
                    +KHGTC SPV   +Y+YF TTL L+  +NVT+ L +A  +AS+++KY +  
Sbjct: 122 KGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGG 181

Query: 188 VFRAVRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDC------DATKSCPKFVSLPEF 239
           +  A+++AF   P++ C K+  I E+R+CF K+F+  DC       + KSCPK+VSLPE+
Sbjct: 182 IVTAIQNAFHITPEVVC-KRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEY 241

[Close]

BLAST of CmaCh16G002600 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.5e-27
Identity = 67/219 (30.59%), Postives = 106/219 (48.40%), Query Frame = 1


Query: 27  EGLTVGKEQREFDYFVLALQWPGSSCRNVSMCC-PTNGCCHRAELPAEFTIHGLWPQYQD 86
           +GL V + Q +FD+F   LQWPG+ C     CC PT+G     +  A+F IHGLWP Y  
Sbjct: 17  QGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSG-----KPAADFGIHGLWPNYNG 76

Query: 87  KGWPSCCTNET-FNENEVSSLFEDLERYWPSYRCG-------LVSSCKKHGTCGSPVILH 146
             WPS C  ++ F+ +++S L   L++ WP+  C             +KHGTC S  ++ 
Sbjct: 77  GSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTC-SESVMD 136

Query: 147 QYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGK--- 206
           Q++YF   L L    N+ + L+ +  I  D   Y ++ +  A++      P I C K   
Sbjct: 137 QHEYFENALKLKQKANLLQILKNSG-INPDDGFYNLDKITNAIKDGIGFTPGIECNKDPE 196

Query: 207 -KGIIKELRLCFDKE-FQLIDCDATK--SCPKFVSLPEF 230
               + ++ +C D    + I+C      SCP  +   +F
Sbjct: 197 RNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228

[Close]

BLAST of CmaCh16G002600 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-26
Identity = 74/221 (33.48%), Postives = 103/221 (46.61%), Query Frame = 1


Query: 25  AVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCC-PTNGCCHRAELPAEFTIHGLWPQY 84
           A++ L V    ++FD+F   LQWPG+ C +   CC P  G     +  A+F IHGLWP Y
Sbjct: 9   ALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTG-----KPAADFGIHGLWPNY 68

Query: 85  QDKGWPSCCTNET-FNENEVSSLFEDLERYWPSYRCGLVSSCK-------KHGTCGSPVI 144
           +  GWP  C  ++ F++  VS L  DL+R WP+  C      K       KHGTC     
Sbjct: 69  KTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESE- 128

Query: 145 LHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITCGK- 204
           L Q+DYF   L L    N+  AL  A  I  D K Y ++D+   ++      P I C K 
Sbjct: 129 LDQHDYFEAGLKLKQKANLLHALTNAG-IKPDDKFYEMKDIENTIKQVVGFAPGIECNKD 188

Query: 205 ---KGIIKELRLCFD-KEFQLIDCDATK--SCPKFVSLPEF 230
                 + ++ LC D    + I+C       C   V  P+F
Sbjct: 189 SSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222

[Close]

BLAST of CmaCh16G002600 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 112.1 bits (279), Expect = 5.1e-25
Identity = 71/235 (30.21%), Postives = 108/235 (45.96%), Query Frame = 1


Query: 10  AQVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAE 69
           A +  + L V LP       +      +FD+F    QWPGS C     CC  N      +
Sbjct: 6   ASLCLISLLVILPSV----FSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNS----GK 65

Query: 70  LPAEFTIHGLWPQYQDKGWPS-CCTNETFNENEVSSLFEDLERYWPSYRCGLVS------ 129
             A+F IHGLWP Y+D  +PS C  ++ F+ + +S L   +++ WP+  C   S      
Sbjct: 66  PAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWE 125

Query: 130 -SCKKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVR 189
              +KHGTC   VI  Q++YF T L L    N+  AL +A  I  D K Y +E +  +++
Sbjct: 126 HEWEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG-INPDGKSYSLESIRDSIK 185

Query: 190 SAFKANPKITCGKKGI----IKELRLCFDKEFQ-LIDCDATK--SCPKFVSLPEF 230
            +    P + C + G     + ++ LC D+    LI+C       C   +  P F
Sbjct: 186 ESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

[Close]

BLAST of CmaCh16G002600 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1


Query: 26  VEGLTVGKEQRE--FDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELPAEFTIHGLWPQY 85
           ++ L V   Q E  F++F     WPG+ C +   CCP      +    ++F IHGLWPQ+
Sbjct: 12  LQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPT----KGNTASDFIIHGLWPQF 71

Query: 86  QDKGWPSCC-TNETFNENEVSSLFEDLERYW--------PSYRCGL-VSSCKKHGTCGSP 145
            +  WP+ C     F+ +++S L   +E+ W        PS    L      KHGTC   
Sbjct: 72  NNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGTCVQS 131

Query: 146 VILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPKITC- 205
            I  Q+ YF T L      ++   L +  I  +D   Y ++++  A++ A    P I C 
Sbjct: 132 -IFDQHSYFRTNLKFKHKVHLLNILIQKGIKPND-GFYSLDEIKNAIKCAIGFAPGIECN 191

Query: 206 ----GKKGIIKELRLCFD---KEFQLIDCDATKSCP---KFVSLPEFHELSKPAMVKRAI 243
               G K +  ++ +C D   KEF        KSC    KF SLPE   L++   V  ++
Sbjct: 192 EDVKGNKQLF-QIYICLDNYAKEFVECPYVPDKSCASKIKFPSLPERDSLNESLSVMSSV 244

[Close]

BLAST of CmaCh16G002600 vs. NCBI nr
Match: gi|778691966|ref|XP_011653385.1| (PREDICTED: ribonuclease 2-like [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.9e-98
Identity = 165/253 (65.22%), Postives = 199/253 (78.66%), Query Frame = 1


Query: 12  VVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELP 71
           VV +V+ + +      G TVGKEQREFDYF+LALQWP +SC NV++CC TN CC RA  P
Sbjct: 12  VVVVVIGIVVVVVDGGGFTVGKEQREFDYFILALQWPSTSCTNVTVCCTTNACCRRAVSP 71

Query: 72  AEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC------- 131
            EFTIHGLWP+Y+ KGWPSCCTNETF+E ++ SLFED+++YWP+YRCGLVSSC       
Sbjct: 72  TEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLVSSCDNRKGSF 131

Query: 132 -----KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRA 191
                +KHGTCGSPVIL +YDYF TTL LF+ YNVTEALE A+I+ASDTKKY I+DV  A
Sbjct: 132 WAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTKKYPIQDVLNA 191

Query: 192 VRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHELSKPAMVK 251
           V SAFK NPK+ C KKGIIKE+ LCFDK+F+L DCDATKSCPK V LP+FH+  +P ++K
Sbjct: 192 VHSAFKVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPKFHKPHEPDVIK 251

Query: 252 RAIPRMIDVEAIM 253
           RAIP +ID+E IM
Sbjct: 252 RAIPIVIDIEEIM 264

[Close]

BLAST of CmaCh16G002600 vs. NCBI nr
Match: gi|659125792|ref|XP_008462862.1| (PREDICTED: ribonuclease 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96
Identity = 165/254 (64.96%), Postives = 197/254 (77.56%), Query Frame = 1


Query: 11  QVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAEL 70
           +VVF+V+ V        G TVGKEQREFDYFVLALQWP + CRNV+ CCPTN C  RA  
Sbjct: 10  RVVFVVVVVIGIIVDGWGFTVGKEQREFDYFVLALQWPSTLCRNVTECCPTNACYRRAVS 69

Query: 71  PAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC------ 130
             +FTIHGLWP+Y+ KGWPSCCTN TFN+ ++ SLFED+++YWP+YRCGLVSSC      
Sbjct: 70  ATKFTIHGLWPKYEGKGWPSCCTNATFNQTQIGSLFEDVDKYWPTYRCGLVSSCDNRKGS 129

Query: 131 ------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFR 190
                 +KHGTCGSPVIL +YDYF TTL LFF YNVTEALE A+I+ASD +KY I+DV  
Sbjct: 130 FWAHQYEKHGTCGSPVILQEYDYFLTTLTLFFKYNVTEALENAEIVASDIRKYPIQDVLN 189

Query: 191 AVRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHELSKPAMV 250
           AV SAFKANPK+ C K GIIKE+ LCFDK+F+L DCDATKSCPK V LP+FH+  +P ++
Sbjct: 190 AVHSAFKANPKLACIKNGIIKEMYLCFDKQFKLRDCDATKSCPKSVKLPKFHKPQEPDVI 249

Query: 251 KRAIPRMIDVEAIM 253
           KRAIPR+ID+E IM
Sbjct: 250 KRAIPRVIDIEEIM 263

[Close]

BLAST of CmaCh16G002600 vs. NCBI nr
Match: gi|700198557|gb|KGN53715.1| (hypothetical protein Csa_4G109040 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 2.7e-92
Identity = 154/232 (66.38%), Postives = 183/232 (78.88%), Query Frame = 1


Query: 12  VVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAELP 71
           VV +V+ + +      G TVGKEQREFDYF+LALQWP +SC NV++CC TN CC RA  P
Sbjct: 12  VVVVVIGIVVVVVDGGGFTVGKEQREFDYFILALQWPSTSCTNVTVCCTTNACCRRAVSP 71

Query: 72  AEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC------- 131
            EFTIHGLWP+Y+ KGWPSCCTNETF+E ++ SLFED+++YWP+YRCGLVSSC       
Sbjct: 72  TEFTIHGLWPKYEGKGWPSCCTNETFDETQIRSLFEDVDKYWPTYRCGLVSSCDNRKGSF 131

Query: 132 -----KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRA 191
                +KHGTCGSPVIL +YDYF TTL LF+ YNVTEALE A+I+ASDTKKY I+DV  A
Sbjct: 132 WAHQYEKHGTCGSPVILQEYDYFLTTLTLFYKYNVTEALENAEIVASDTKKYPIQDVLNA 191

Query: 192 VRSAFKANPKITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHE 232
           V SAFK NPK+ C KKGIIKE+ LCFDK+F+L DCDATKSCPK V LP+FH+
Sbjct: 192 VHSAFKVNPKLACVKKGIIKEIYLCFDKQFKLRDCDATKSCPKSVKLPKFHK 243

[Close]

BLAST of CmaCh16G002600 vs. NCBI nr
Match: gi|659125796|ref|XP_008462864.1| (PREDICTED: ribonuclease 2-like isoform X3 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78
Identity = 137/212 (64.62%), Postives = 162/212 (76.42%), Query Frame = 1


Query: 11  QVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAEL 70
           +VVF+V+ V        G TVGKEQREFDYFVLALQWP + CRNV+ CCPTN C  RA  
Sbjct: 10  RVVFVVVVVIGIIVDGWGFTVGKEQREFDYFVLALQWPSTLCRNVTECCPTNACYRRAVS 69

Query: 71  PAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC------ 130
             +FTIHGLWP+Y+ KGWPSCCTN TFN+ ++ SLFED+++YWP+YRCGLVSSC      
Sbjct: 70  ATKFTIHGLWPKYEGKGWPSCCTNATFNQTQIGSLFEDVDKYWPTYRCGLVSSCDNRKGS 129

Query: 131 ------KKHGTCGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFR 190
                 +KHGTCGSPVIL +YDYF TTL LFF YNVTEALE A+I+ASD +KY I+DV  
Sbjct: 130 FWAHQYEKHGTCGSPVILQEYDYFLTTLTLFFKYNVTEALENAEIVASDIRKYPIQDVLN 189

Query: 191 AVRSAFKANPKITCGKKGIIKELRLCFDKEFQ 211
           AV SAFKANPK+ C K GIIKE+ LCFDK+F+
Sbjct: 190 AVHSAFKANPKLACIKNGIIKEMYLCFDKQFK 221

[Close]

BLAST of CmaCh16G002600 vs. NCBI nr
Match: gi|659125794|ref|XP_008462863.1| (PREDICTED: ribonuclease 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 3.7e-78
Identity = 143/243 (58.85%), Postives = 176/243 (72.43%), Query Frame = 1


Query: 11  QVVFMVLAVTLPPQAVEGLTVGKEQREFDYFVLALQWPGSSCRNVSMCCPTNGCCHRAEL 70
           +VVF+V+ V        G TVGKEQREFDYFVLALQWP + CRNV+ CCPTN C  RA  
Sbjct: 10  RVVFVVVVVIGIIVDGWGFTVGKEQREFDYFVLALQWPSTLCRNVTECCPTNACYRRAVS 69

Query: 71  PAEFTIHGLWPQYQDKGWPSCCTNETFNENEVSSLFEDLERYWPSYRCGLVSSC-KKHGT 130
             +FTIHGLWP+Y+ KGWPSCCTN TFN+ ++ SLFED+++YWP+YRCGLVSSC  + G+
Sbjct: 70  ATKFTIHGLWPKYEGKGWPSCCTNATFNQTQIGSLFEDVDKYWPTYRCGLVSSCDNRKGS 129

Query: 131 CGSPVILHQYDYFFTTLALFFNYNVTEALEEADIIASDTKKYGIEDVFRAVRSAFKANPK 190
             +    HQ                 EALE A+I+ASD +KY I+DV  AV SAFKANPK
Sbjct: 130 FWA----HQ-----------------EALENAEIVASDIRKYPIQDVLNAVHSAFKANPK 189

Query: 191 ITCGKKGIIKELRLCFDKEFQLIDCDATKSCPKFVSLPEFHELSKPAMVKRAIPRMIDVE 250
           + C K GIIKE+ LCFDK+F+L DCDATKSCPK V LP+FH+  +P ++KRAIPR+ID+E
Sbjct: 190 LACIKNGIIKEMYLCFDKQFKLRDCDATKSCPKSVKLPKFHKPQEPDVIKRAIPRVIDIE 231

Query: 251 AIM 253
            IM
Sbjct: 250 EIM 231

The following BLAST results are available for this feature:

BLAST of CmaCh16G002600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNS2_ARATH	9.3e-61	43.37	Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1	[more]
RNS3_ARATH	4.8e-25	33.48	Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1	[more]
RNS1_ARATH	9.1e-24	30.21	Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1	[more]
RNLX_SOLLC	2.0e-23	31.75	Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2	[more]
RNDI_DICDI	2.6e-23	30.45	Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3	[more]

BLAST of CmaCh16G002600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVR6_CUCSA	1.9e-92	66.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109040 PE=3 SV=1	[more]
A0A0A0L0P9_CUCSA	4.5e-78	52.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109540 PE=3 SV=1	[more]
C4PD01_CITMA	4.5e-62	50.23	S-like RNase OS=Citrus maxima PE=2 SV=1	[more]
D0VUS4_CITMA	5.8e-62	50.23	S-like RNase OS=Citrus maxima PE=3 SV=1	[more]
A0A162A2W5_DAUCA	2.2e-61	43.30	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018604 PE=4 SV=1	[more]

BLAST of CmaCh16G002600 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39780.1	5.2e-62	43.37	ribonuclease 2	[more]
AT1G14220.1	5.5e-27	30.59	Ribonuclease T2 family protein	[more]
AT1G26820.1	2.7e-26	33.48	ribonuclease 3	[more]
AT2G02990.1	5.1e-25	30.21	ribonuclease 1	[more]
AT1G14210.1	2.9e-20	29.17	Ribonuclease T2 family protein	[more]

BLAST of CmaCh16G002600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691966\|ref\|XP_011653385.1\|	1.9e-98	65.22	PREDICTED: ribonuclease 2-like [Cucumis sativus]	[more]
gi\|659125792\|ref\|XP_008462862.1\|	4.0e-96	64.96	PREDICTED: ribonuclease 2-like isoform X1 [Cucumis melo]	[more]
gi\|700198557\|gb\|KGN53715.1\|	2.7e-92	66.38	hypothetical protein Csa_4G109040 [Cucumis sativus]	[more]
gi\|659125796\|ref\|XP_008462864.1\|	2.2e-78	64.62	PREDICTED: ribonuclease 2-like isoform X3 [Cucumis melo]	[more]
gi\|659125794\|ref\|XP_008462863.1\|	3.7e-78	58.85	PREDICTED: ribonuclease 2-like isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001568	RNase_T2-like
IPR018188	RNase_T2_His_AS_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0033897	ribonuclease T2 activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G002600.1	CmaCh16G002600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	GENE3D	G3DSA:3.90.730.10		coord: 35..230 score: 3.2
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 12..232 score: 1.6
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 40..214 score: 1.4
IPR001568	Ribonuclease T2-like	unknown	SSF55895	Ribonuclease Rh-like	coord: 37..228 score: 3.93
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 74..81 scor
None	No IPR available	PANTHER	PTHR11240:SF16	RIBONUCLEASE 2	coord: 12..232 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G002600	Cucsa.398180	Cucumber (Gy14) v1	cgycmaB1101
CmaCh16G002600	Cla002480	Watermelon (97103) v1	cmawmB293
CmaCh16G002600	Csa4G109040	Cucumber (Chinese Long) v2	cmacuB334
CmaCh16G002600	MELO3C024816	Melon (DHL92) v3.5.1	cmameB306
CmaCh16G002600	ClCG10G009300	Watermelon (Charleston Gray)	cmawcgB280
CmaCh16G002600	CSPI04G09320	Wild cucumber (PI 183967)	cmacpiB339
CmaCh16G002600	CmoCh16G002670	Cucurbita moschata (Rifu)	cmacmoB325
CmaCh16G002600	Lsi03G009520	Bottle gourd (USVL1VR-Ls)	cmalsiB307
CmaCh16G002600	Cp4.1LG14g05080	Cucurbita pepo (Zucchini)	cmacpeB346
CmaCh16G002600	MELO3C024816.2	Melon (DHL92) v3.6.1	cmamedB357
CmaCh16G002600	CsaV3_4G009480	Cucumber (Chinese Long) v3	cmacucB0389
CmaCh16G002600	Cla97C10G192460	Watermelon (97103) v2	cmawmbB332
CmaCh16G002600	CsGy4G009070	Cucumber (Gy14) v2	cgybcmaB495
CmaCh16G002600	Carg16789	Silver-seed gourd	carcmaB1207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G002600	Watermelon (97103) v2	cmawmbB352
CmaCh16G002600	Wax gourd	cmawgoB0410
CmaCh16G002600	Wax gourd	cmawgoB0440
CmaCh16G002600	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G002600	Cucumber (Gy14) v1	cgycmaB0196
CmaCh16G002600	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G002600	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G002600	Wild cucumber (PI 183967)	cmacpiB337
CmaCh16G002600	Cucumber (Chinese Long) v2	cmacuB332
CmaCh16G002600	Melon (DHL92) v3.5.1	cmameB304
CmaCh16G002600	Watermelon (Charleston Gray)	cmawcgB302
CmaCh16G002600	Watermelon (97103) v1	cmawmB313
CmaCh16G002600	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G002600	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G002600	Bottle gourd (USVL1VR-Ls)	cmalsiB323
CmaCh16G002600	Cucumber (Gy14) v2	cgybcmaB493
CmaCh16G002600	Melon (DHL92) v3.6.1	cmamedB355
CmaCh16G002600	Silver-seed gourd	carcmaB0406
CmaCh16G002600	Silver-seed gourd	carcmaB0526
CmaCh16G002600	Cucumber (Chinese Long) v3	cmacucB0387