Cla002480 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTTTCTCCTTCAAAGCGGCGGCGACGGTGGTTTTTGTGGTTGTTGTTGCTATTGTTGTTAGGGTGCAGACGGCGGAGGGCATCACCGTCGGCAAGGATCAAAGGGAATTTGACTACTTTGTATTGGCTCTTCAATGGCCAGCAACGTTGTGCAGAAACATAAGCCTATGTTGCCCCACCAACGCTTGCTGCCGTGGGTGAGTTGGTTTTTTTTTTCATTTTTTTTTAAAAATAGTTTTGTTGTTGTTTAACTTTCTAATTTCTATTTTGATATTTTGATTTAGAGTTTATTTCAATTTAGTCTTTAAATTTTAAAATCTTACAATTTTAAGATTTTAGTTTTATTATAATTTGATCTATAGTTTTAAATTTATATTTTTAACTTTGATTTTAATAAATATTCACTTTTTATATCTTTAGTGTTAATATCTATTAATTAATTAAAATAGTTATGAAAGAAAATTTTAAATTTTATTTTAATAGTGATGAAAAATAGTAAAAATTAATTAATTGTAATTTTGTAATTCTTTTAATTCTTTTAAATTAATTAATATGCGTTAGCATTGAGACAAAAATGTATGTATTATATTTATTCAAAAATCAAGGTTAAAAGTATAAATCTTAAAAAAACTCAAATTTCAATAACAAAATTATAACATTTTAATATGTAAGGACTAAATCAAATTCAACTTAATGATTAAGTGTTTAATTTTGACACTTATAGGCCAAATGAAAACTAGACCCAAAATTTAGAAACGAAAAAGTTATTTTTTTTTCCTCTCCTTTTTCTTTTATAAGGTGTTTTGTGGTTTGTGATAAAAAATAAAAAAATGAGGAGTATGAGAGTACCTCTTCTCGTTTGTTCATATTTTATTTTATTCTTTTTTTCTTTAAATAACTGATCTTTTAATATTGACGAAATTGACATTATTGTTAAAAATTTATATATAAATACATGTTAAGTTATATCTATAATTGTGCAACTGACCTAATTATTCAACTACAATTTAGTGGCAAGTTGTGTTGTTTTTCTAAAAAGATAATTTTAAATTTTTTAATGCATATTTTTACGATAATTGACATGGGTAGGACTATAAATGAAAAGAAATATGTATACTTTTTGAGGTACTTAAAATTGTTCTTTCTGGTTACTTTGGAAAGTGCAATAATATAATAACTAATGTGCTAATTTCGATTTTTCTATTTCTCTCTAGACCAGACTCTCCCACTGAATTTACAATCCGTAAGTGTGAAAGAAAAAAAAAAAAAAGTGAATTCCCTTCGGCTTTGATTTTGGATTTCATTTGAATGTGATGATAAGAGTTCTATCATTGTTAGTCTTTTAATGTTATTAAAAATGGGGCAGATGGGCTGTGGCCTCAGTATGAAGGCAAAGGATGGCCTTCATGTTGTACTAATGCTACCTTCAATGAAGATGAGGTCTCTCTCTCTCTCAAATTTAATGGTTTCCAGAGTTAGTGATATTTGTGTACATTATAACATATATTTATGTTGGTGTATCTCAATTTAATTACACACGAAACTATAATATATAATTTAATTACACACGAAACTATAATATATAAAAGTTTACCCATTTGAGATTTATAAAGATTGATATAGTTTGTAATAGAGTAATTTTTAATAAAGTATATACCACCTTTTTTAAATATTTAAAAATAAACAAATGATATTTAAATTGATAAATATACTTTTTTATTCTTTTCGAATCAAGTTAGGACAACGTGTACACATTTTGATCCTTGAAATTTGGGTGTAGTTACGTAATAGTCTTGGAGTATTTAATTAAACTTGACATGCTCTCTCCTCATAGTTTTTGAGTTCGTTATTCTTGGATTAGATTCTAAAAAAAATGGTTAAAATGTCAATTTGAAAGTTCCTGAACGCAAATACAACTAGGCTAAACTTCAATGATTATAAATTTTTTTTCTTTCTTTTTTTTTTTGAAATATTAAAATTTAGGGATTGAGCATTATTTATTATAAATGCAGTACATCAATAATGAAATATTGTTATTGTTTTTATATATTATATCAATAGTTTTTCATCAATACATAACAGAAATATGTGGATGTATATCAAACACAGACTTAAAAAATTTAGAAGCAAAAAATGTAATTGAACATAAAATATTAAATATACCTCTAAAAGTATATTAAAAAGGATTAAATATACCTATTTATTTGAAAACAAGATATAAAAAAGGGGACATTATTGTAGGTAATGCTATATATATTCCATGATCTTAAAAATCATGCCTATCTTCTTCTATACCAATGGTATTTTCACTCCAACACCTTGTAGATTAGTTCCTTGTTTGAGGATATTCACAAGTATTGGCCAAGCTATCGGTGTGGTCTTGTAAGCAGCTGCTATAACAGAAAAGGATCATTTTGGGCTCACCAGGTTCAATTTTTCTACACAAAAATATAACTTTAATTTGGTCCTCTATTTGGATTTAGTTTTGAGTCCTTAACTTTCCAAACTTCCACAATTTAATTTCTAGTAATTTAAATAATAAGGATTTAGGGTAACTATCACCTTTTAAGCTATGTCACTTAAATATATTAATTTTATAGTTTTTAAATTTTTAATGTGCCAAAAAAACATCAAAACACGGCTGAAAATATTTATAAATAATAGCAAAATATCACAGTCTATCTGCAGTAAACAGCGATAGACTTAATCTATGTCTATCATGAAACAGATAGACACATATAGTAGTCAACCGCAGTGTATTGCAGATAAACTTGATGTATTTGTAAACATTTTGGTTCATTTTCTTATTTTTCACAATATCCCAATATATATATAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTGAACATCTAATTTTAACACTTGTATAAGGTTGAAGGGTCAATTTTTACAATTCAAAATTTGATGGTATAATTACAACTATCACCATACTTTAGAGGTGATTTTTAATTTGCAATTTGTCTAAAAAAAAATGCAAAATTATCAATCAATTTCCTGTTAGCTACATTAGTGGAAATTAATGACAGTGACTAGAAAAGAGATTGTCTAATAAACTTCATGAGTAAAAATATCGGATTTAAAAACTTAAAGAATCCAAATCTTAATTAAATCAAATTTCAAGGACTAAAAATTTATTTTTTTTTAGTGATTGTCTATAGTTCGTTCCTTAGCTTATTATTAAAAATTCGAGACTGTATCCTAACATTCTCTCTTTTTCCCTTATTCATGATGGGTATTTGACATGTTACACCATTATATTGCTGCAGTATGGTATGTTTTCTATTTCCTTTTTCTTTTTCACCTCTTCCATCTCTCATGTTTTTCTTCTTTCTTCATTCTTATCTCACCCATGACTAAAGCTATTTTCTTACATTCTTAACCAATGGAAAACAGAAATATGTTTTGAAAACATTTAGAAACATATTTTATAAAAGAATATTATCTTTTAATTATTAAATACCATTATATTAGGATTAGATTATACATATTTAAGTAATTTTTAATTTCCCTTTTCTTAACTTTTTGTTTAGAGAAACATGGAACCTGTGGATCTCCTCTAATTCTACAAGAATATGATTACTTCTTGACAACTCTCACCCTTTTCTTCAAGTATAATGTCACTGTAAGCAAGCTTTTATAAACCCCTCTCTCTCTCCGGTTCAATTCTCAAATTCTCACACTCTAATGTGAGATTTTCAACATGTCTTTCAATATTGTGTCTCTTTGAGTTTACTATTCTTGAATTGAATCCTAATATTCTTCTAGACCGAGGACCTGTTGGATTTCATAAGCTATGATACCATATTAGATAAACAAGAGTTTCATTTCAAACCCAATTAACGTAATTTTATGTATCTTTTAAAAATTGCGAGGTTCTTATTTTTGAGGTTGACAATTAAAAAAACAAAAAACTATTGTAAGATATTAATACAACGTGGCAGATAGTTTTGAATCATTAAATGTAGGAGAGAAACCCAGTGGAAAATTACTTTCAACATATATCTAAACCCATATTAGTATTAGGTTTAAAAAAATCACTAGTAGAAGATTATGATTTGTACATATTTTAAATTAGTAAACTTTATTTTTAACACCTTTTATATAAACCATTTTGATTTTTATGATGAGATCACACCATTAAAGATTTTTATTTATTTATTTATTTATTTTTTAACATTTTTGAGTTCATCATAGATTGCACCAAAGATGATTTATAAGATGAGTTACAAGAAGATGGGTGCACTCAAGATTTTTTTTTTTTTTTAAAGAAAATACTTAAGTATTGCCAGAGTGTACCTATACCTTTGTGCATAGCTTAGTGCTATTCCAAAAAAAAAAAAAAAAATGCTATGTCACAATCTTTAAATTTTTTTTATAAAAAAAATTCTTTATGTGTAAAGTAAAGGGGAGCATGGAATTAGGTGGAATTAGATGCAGCCGTGTTGACTGGACTCCACCTGTCTTTGTGCAGTCCAAATAGCTATTTAGTAAAATATTGTCACATGACAAATTTTTTTTAATTATATTATTAATAATTTTTTGTGTATAAAAAGAAGGAGAACATAGAATTAGGCGCACTAATTCTCAAACCTAAAATCAAACTTATAAAAGTAAGTTTACTTAGAGTGAGGGGTAGGAGTTAGATCAATATTGTTGTATACGTTAGCTGTACTAAATATTTGATCCCATATATATAATAAATATTGAATTTTTTTTTTTTTTTTTTATTTTGTGGCATTATGGATTTTGAAGCGTTAAAACTGATCAGGAAGCTTTGGAGAATGCTGAAATTGTAGCTTCGGATACCAAAAAGTATCGTATTCAAGATGTTCTAAATGCAATTCACTCCGCTTTCAAAGCAAATCCAAAGCTTGCATGCGCTAAAAAAGGGATTATTAAAGAACTTCGTCTATGCTTTGATAAACAATTGAAGGTATATATATATTTCTTTCTTCATAAATTCATACCCAAACAAAAAAATTATCATTTAAAAATTTTCTAA ATGACTTCTTTCTCCTTCAAAGCGGCGGCGACGGTGGTTTTTGTGGTTGTTGTTGCTATTGTTGTTAGGGTGCAGACGGCGGAGGGCATCACCGTCGGCAAGGATCAAAGGGAATTTGACTACTTTGTATTGGCTCTTCAATGGCCAGCAACGTTGTGCAGAAACATAAGCCTATGTTGCCCCACCAACGCTTGCTGCCGTGGACCAGACTCTCCCACTGAATTTACAATCCATGGGCTGTGGCCTCAGTATGAAGGCAAAGGATGGCCTTCATGTTGTACTAATGCTACCTTCAATGAAGATGAGATTAGTTCCTTGTTTGAGGATATTCACAAGTATTGGCCAAGCTATCGGTGTGGTCTTGTAAGCAGCTGCTATAACAGAAAAGGATCATTTTGGGCTCACCAGGTTCAATTTTTCTACACAAAAAAGAAACATGGAACCTGTGGATCTCCTCTAATTCTACAAGAATATGATTACTTCTTGACAACTCTCACCCTTTTCTTCAAGTATAATGTCACTGAAGCTTTGGAGAATGCTGAAATTGTAGCTTCGGATACCAAAAAGTATCGTATTCAAGATGTTCTAAATGCAATTCACTCCGCTTTCAAAGCAAATCCAAAGCTTGCATGCGCTAAAAAAGGGATTATTAAAGAACTTCGTCTATGCTTTGATAAACAATTGAAGGTATATATATATTTCTTTCTTCATAAATTCATACCCAAACAAAAAAATTATCATTTAAAAATTTTCTAA ATGACTTCTTTCTCCTTCAAAGCGGCGGCGACGGTGGTTTTTGTGGTTGTTGTTGCTATTGTTGTTAGGGTGCAGACGGCGGAGGGCATCACCGTCGGCAAGGATCAAAGGGAATTTGACTACTTTGTATTGGCTCTTCAATGGCCAGCAACGTTGTGCAGAAACATAAGCCTATGTTGCCCCACCAACGCTTGCTGCCGTGGACCAGACTCTCCCACTGAATTTACAATCCATGGGCTGTGGCCTCAGTATGAAGGCAAAGGATGGCCTTCATGTTGTACTAATGCTACCTTCAATGAAGATGAGATTAGTTCCTTGTTTGAGGATATTCACAAGTATTGGCCAAGCTATCGGTGTGGTCTTGTAAGCAGCTGCTATAACAGAAAAGGATCATTTTGGGCTCACCAGGTTCAATTTTTCTACACAAAAAAGAAACATGGAACCTGTGGATCTCCTCTAATTCTACAAGAATATGATTACTTCTTGACAACTCTCACCCTTTTCTTCAAGTATAATGTCACTGAAGCTTTGGAGAATGCTGAAATTGTAGCTTCGGATACCAAAAAGTATCGTATTCAAGATGTTCTAAATGCAATTCACTCCGCTTTCAAAGCAAATCCAAAGCTTGCATGCGCTAAAAAAGGGATTATTAAAGAACTTCGTCTATGCTTTGATAAACAATTGAAGGTATATATATATTTCTTTCTTCATAAATTCATACCCAAACAAAAAAATTATCATTTAAAAATTTTCTAA MTSFSFKAAATVVFVVVVAIVVRVQTAEGITVGKDQREFDYFVLALQWPATLCRNISLCCPTNACCRGPDSPTEFTIHGLWPQYEGKGWPSCCTNATFNEDEISSLFEDIHKYWPSYRCGLVSSCYNRKGSFWAHQVQFFYTKKKHGTCGSPLILQEYDYFLTTLTLFFKYNVTEALENAEIVASDTKKYRIQDVLNAIHSAFKANPKLACAKKGIIKELRLCFDKQLKVYIYFFLHKFIPKQKNYHLKIF
BLAST of Cla002480 vs. Swiss-Prot
Match: RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.6e-60 Identity = 107/221 (48.42%), Postives = 140/221 (63.35%), Query Frame = 1
BLAST of Cla002480 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.3e-21 Identity = 64/201 (31.84%), Postives = 91/201 (45.27%), Query Frame = 1
BLAST of Cla002480 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19 Identity = 58/177 (32.77%), Postives = 80/177 (45.20%), Query Frame = 1
BLAST of Cla002480 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19 Identity = 60/201 (29.85%), Postives = 92/201 (45.77%), Query Frame = 1
BLAST of Cla002480 vs. Swiss-Prot
Match: RNOY_CRAGI (Ribonuclease Oy OS=Crassostrea gigas PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17 Identity = 59/204 (28.92%), Postives = 90/204 (44.12%), Query Frame = 1
BLAST of Cla002480 vs. TrEMBL
Match: A0A0A0KVR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109040 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.1e-97 Identity = 169/218 (77.52%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Cla002480 vs. TrEMBL
Match: A0A0A0L0P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109540 PE=3 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.6e-75 Identity = 142/234 (60.68%), Postives = 176/234 (75.21%), Query Frame = 1
BLAST of Cla002480 vs. TrEMBL
Match: M5W6T6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009963mg PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.0e-63 Identity = 117/228 (51.32%), Postives = 152/228 (66.67%), Query Frame = 1
BLAST of Cla002480 vs. TrEMBL
Match: A0A162A2W5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018604 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61 Identity = 108/221 (48.87%), Postives = 152/221 (68.78%), Query Frame = 1
BLAST of Cla002480 vs. TrEMBL
Match: D0VUS4_CITMA (S-like RNase OS=Citrus maxima PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61 Identity = 113/219 (51.60%), Postives = 145/219 (66.21%), Query Frame = 1
BLAST of Cla002480 vs. NCBI nr
Match: gi|778691966|ref|XP_011653385.1| (PREDICTED: ribonuclease 2-like [Cucumis sativus]) HSP 1 Score: 364.4 bits (934), Expect = 1.6e-97 Identity = 169/218 (77.52%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Cla002480 vs. NCBI nr
Match: gi|700198557|gb|KGN53715.1| (hypothetical protein Csa_4G109040 [Cucumis sativus]) HSP 1 Score: 364.4 bits (934), Expect = 1.6e-97 Identity = 169/218 (77.52%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Cla002480 vs. NCBI nr
Match: gi|659125792|ref|XP_008462862.1| (PREDICTED: ribonuclease 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96 Identity = 171/219 (78.08%), Postives = 188/219 (85.84%), Query Frame = 1
BLAST of Cla002480 vs. NCBI nr
Match: gi|659125796|ref|XP_008462864.1| (PREDICTED: ribonuclease 2-like isoform X3 [Cucumis melo]) HSP 1 Score: 359.4 bits (921), Expect = 5.2e-96 Identity = 171/218 (78.44%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Cla002480 vs. NCBI nr
Match: gi|659125801|ref|XP_008462866.1| (PREDICTED: ribonuclease 2-like [Cucumis melo]) HSP 1 Score: 293.5 bits (750), Expect = 3.5e-76 Identity = 137/231 (59.31%), Postives = 168/231 (72.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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