MELO3C024816.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024816.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ribonuclease 2-like
Location	chr07 : 19327443 .. 19331800 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCACTACAACAACATACACCAGCTTCCTAATTTCCATTTAAAATGGCTTCTTTCTCCATTAAAGGCAAGCCCATGGTGTTTCTTTTTCTTATTGTTGAGCTGCTGACAGTGGTGTTCGGGTTCTCGGCGGAGGCCCCAAGCGGCAGTGAGCAGAGGGAATTTGATTACTTTGTGTTGGCTCTTCAATGGCCAGCTACTTCTTGCAAAAACGCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGGTAATTTCTCCAAAATAATGCTAAAACCATTCGAACAAAAGGCAGAAGAAATAATAATAATAATAATAATAATGGTTATGATTACTGGATGCATGAATGTGTCTAATTTTTTTAATTAGAAAAAGAAAGTTATTTTAAACCACAAAACCTTGAAAATATTTGGAATTATAGTAAAGCATATTACAATCCATCTATATATGATAAAATTAATTTAAAATATTCTCTCTTTTAGACTTTAGCCACATTATGCATGCCTGTCTCTTTCCAAATAATTTCCTTCCGAGTTTTGTGTTTCTTTATTTTTAACTTCTGAAAGCTAACATTTTTTTTCTTTTCTGTGTGTGTCTAGAGCTGATTCTCCCACTGAATTTACAATCCGTAAGTGAAAATTCATCAATAAGCTCCTAAGCTTTGGAATTTTTGTTAGTTATTGATCATATATATTTTTCATTTGGATGTTTAATTAATTTTTTGTGTGTTTAATTCATTGTGATATAGACGGATTGTGGCCCCAGTATAACGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGGTTCCTTATCTTTCACTCCATACAATTTTAATTTAAATTGTTTTCTTCCCATCTCCAACACCTATCTCACACGGTATTATTAATTATATGCTATTAAATTCTATGTTGATATATATTGATATTTACATGTGCTTGCACCTTCCACATCGATATTAGATATAAATTTGAAGCTTCCAAGTCATTACTACCTTTTATACATACTGTATGTTTTATCTCGTTGAATCTCTCTACATATATATTCAAAATAATAAATCCATTTTAATTCTATTAGCAATACTGAAAACTAGAAAATTCACTACAATTAGGGGCTTTTAGAAAATAATAATAATAATAAAAAAAAAAACAAAATATTTACACTTTTAAAGGAAGAAAATTCTCTGCATATCACTTGTGTGCAAATATTTTGTTGATTTCGGTATTATAGTTGAAAGAATGAATGATTAATCTTTGAAATGAAAATTAACATCTTATTTAGTAAGGTATAGTCAAATTAGGTGACATTTGCAGATTGGTATCTTGGCTGAGGATATTCAAAAGTATTGGCCGACTTACCGATGTGGTACTTCGTCCACGTGCCATAGGACCAAGGGATCATTTTGGGCCCATGAGGTTCAAATTATTCTCCCTTTTACTCCTTTCCTTAAATAGCTCATCAATATCAAAGTTTTGAGACTGACAATTCTTTTTCTCTCTTTATCCCATTATTATATGATGATGACCATTACACATGTTACCATTACTATAGTACGGTGAGTTTTCTTTTTTCTTTTTATTTTTTACTTTTCTAATTTCAATTTTTTTCTCCTTAAAAATTTGATATCGTATGTTTTTTTTTCTTTTAACTTAAATAGAGAATCGTAAAAAATGACGATTTTGATAAAATACACCAAAATTTTAGATTATCTCAATAATAGATATTAATAAACACTTATTTACTTCTTTTATCAGTCATATCGATAAACAATATTAAAAATATATCAATATTTATTAATGATAAAATCTAAAATTTTATTATATGATATAAATATTTTAATTTATTTTATTATATTAAAAAATGTGCCTATCTTAAATTTAAAAAGAATTTAAAAGTATTTATTTTGCAGAGAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGACAGCCCTCACCATCTTCTCCAAGTACAATGTCACGGTACGCTATTTCATCTTTTCCTTTTTCCTTTTTTCTTTAATTATTTCTTCATAGTTTTTTTCTTAATTTTTTTTATAATATCTATTATAATATTAGATTAATTTTTATAAATGTAACAAAATACCAAACTATTTACGATCCGTATAATAAAGTTTATTAAGTTAACAATTTTTTAAATATTTCAAATTTCGCTACAATTCCTTTCTTCGTCTTCTTCCTCTATGTGATTTTTTATTGTATTTTTTCTACTGTCATTTCTTTTCATAAATCTTTTTTCTTTTTTTATTCTTTTTTTAGGTCATTTAATCTTTTCATCGTCTTTTTTCTTTTTCTTTTCCTTTTTTCGCTACGACTTTTTTTCCATCTTCTTTCTTCTTTTCCTCTTATATTTTTCTGTTTCGATTTTTTTCCATTGTCTTTCTTCTTTTCCTCTCATTTTTTTCTGCTGCGATTTCTTTCCATCATCTTTCTTCGTTTCCTTTTCCTTTTTTACATCGTTTAAGTTTGGGTAACCAAACCTAAACCACCATGTACAAAGAAAATAGCAAAATTAAAACATCGTGTATAAAGAATATTGAAAAAAATCATTTAGATTGGAGTAGTCAAATGTAAACAATAGTGTAAAAAAAGTAAAGGGTCGTGTAAAGAAAATAAATCATCATGTAGACAAATCTAAACGATCGTGTACCAAAAGAATAAAAAAAATCGTTTAGTCAAATCTAAACGATCGTGTAATAAAGAATTTTGAAAAAATAAACGATAGCGTAAACAAATCTAAACAATCGTGTAAAAAAAAATAAACGATCTTGTTGTACCAAAAGAATTAAAAAAAAAATCGTTTAACCAAATCTAAACAATCGTGTACCAAATTTTGAAAAAAGAAATCGTTTAGATTTGGGTCCAAATCTAAATGATCAAATATAAACTATCGTGTAACTAAATTTAAACGTAATCAAATAAAACGATCGTGTAACAAAATTGAACAATAGAAATAAAAAAATAAATTGTACCAAAATCTAAACGACTAAATATAATCGATTGTGTACGAAACAATAGTCAAACATAAACGATCATGTACCAAATATATTACGTGCGCGTTGTTGGCGGCGTGGTTGAATTTTTTGTATTTTTCATGGTGGACACGTGAGTTTTTCCCATTTTTAGAATTGTTTTATACAATATAAATATTTTGTCGGTTTGTTATATTTTATAAAAGACCGCGTAATACTATTATAGAAAAAATAAATTCTAACATTGAGTTTGGGTATTAAATAATTTGGGTGTCTTTTGTTAACAGAAAGTTTTGAGTGAAGGTGGATTTGTAGCTTCCAATACTGAAAAGTATCCAATTGAAGATGTAATAGCTGCAATTAAGAATAAATTCTATAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGGTAACGGGTTTCCAATTTTTATCTGTTTAAGTTTTATGAACCGTTGATACTATATTATATGATCAATATAGAGAGTATTCTTAACAAAATTACATCTTTCTACAATAAAATAGTTGAATTCTTAGTTAATTTCAAGAAGAAAAAAATTACAATTTTTTTAAAACCTATATTTCTTTTCATATCAGTAAGAATTAGAATAAAATTTTAGATAGATTAAAGAGGTATAAATAGAATGACTATAAGTTAATTTTCCAAAATTTTAAAAAAATCGAATAGTTATGAAACGTAGCCTAATATTATTCATAATAACAAGATACTAACCAAAGTAAATCTCTACTTGTTATAGCCACGTGACTGTAATCTACAGCATTCATGCCCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGGTATGTTTTTCCTTTTCTTCATTAAAAGAAATTAATTAGTCTGATTGCATTTTAGATACTATGTATCCAAATAATTACTAAACTCAAGAGCCTAAGTTAAGCTAATAATTAATCTATGATATACTTAATCTTGTTTAATATATTGTTTTTAACATATTAATTGTATTATTTGTGATGCAGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAACCTTTTTTTTTCTAAACCATAAAAGAGATGGCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGCCTTTTGATGTTAAGCTCACCCAATTTCTCTGAGTTGAACGGTTCCATTATGCATGTGGGTTTGCTTTTCCAAATAAAAGATGTAGTAGTTAATAATAAAACAATAAGTTGATCAAATTGGATGTGTTTTCAATTTATTATA

mRNA sequence

TCTCACTACAACAACATACACCAGCTTCCTAATTTCCATTTAAAATGGCTTCTTTCTCCATTAAAGGCAAGCCCATGGTGTTTCTTTTTCTTATTGTTGAGCTGCTGACAGTGGTGTTCGGGTTCTCGGCGGAGGCCCCAAGCGGCAGTGAGCAGAGGGAATTTGATTACTTTGTGTTGGCTCTTCAATGGCCAGCTACTTCTTGCAAAAACGCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGAGCTGATTCTCCCACTGAATTTACAATCCACGGATTGTGGCCCCAGTATAACGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGATTGGTATCTTGGCTGAGGATATTCAAAAGTATTGGCCGACTTACCGATGTGGTACTTCGTCCACGTGCCATAGGACCAAGGGATCATTTTGGGCCCATGAGAGAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGACAGCCCTCACCATCTTCTCCAAGTACAATGTCACGAAAGTTTTGAGTGAAGGTGGATTTGTAGCTTCCAATACTGAAAAGTATCCAATTGAAGATGTAATAGCTGCAATTAAGAATAAATTCTATAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGTAATCTACAGCATTCATGCCCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAACCTTTTTTTTTCTAAACCATAAAAGAGATGGCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGCCTTTTGATGTTAAGCTCACCCAATTTCTCTGAGTTGAACGGTTCCATTATGCATGTGGGTTTGCTTTTCCAAATAAAAGATGTAGTAGTTAATAATAAAACAATAAGTTGATCAAATTGGATGTGTTTTCAATTTATTATA

Coding sequence (CDS)

ATGGCTTCTTTCTCCATTAAAGGCAAGCCCATGGTGTTTCTTTTTCTTATTGTTGAGCTGCTGACAGTGGTGTTCGGGTTCTCGGCGGAGGCCCCAAGCGGCAGTGAGCAGAGGGAATTTGATTACTTTGTGTTGGCTCTTCAATGGCCAGCTACTTCTTGCAAAAACGCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGAGCTGATTCTCCCACTGAATTTACAATCCACGGATTGTGGCCCCAGTATAACGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGATTGGTATCTTGGCTGAGGATATTCAAAAGTATTGGCCGACTTACCGATGTGGTACTTCGTCCACGTGCCATAGGACCAAGGGATCATTTTGGGCCCATGAGAGAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGA

Protein sequence

MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHERSMGHVQLPCLWENMITF

Homology

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BLAST of MELO3C024816.2 vs. NCBI nr
Match: XP_008462866.1 (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-79
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60
           MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC
Sbjct: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60

Query: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120
           CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC
Sbjct: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120

Query: 121 GTSSTCHRTKGSFWAHE 138
           GTSSTCHRTKGSFWAHE
Sbjct: 121 GTSSTCHRTKGSFWAHE 137

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BLAST of MELO3C024816.2 vs. NCBI nr
Match: XP_022922895.1 (ribonuclease 2-like [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61
Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MASFSIKGKPMV----FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKN 60
           MASFSIK  PMV       L+++L+ VV   +AE PSG EQREFDYFVLALQWPATSCKN
Sbjct: 1   MASFSIKSNPMVVAPAVFLLVLQLVAVV--LAAETPSGGEQREFDYFVLALQWPATSCKN 60

Query: 61  AGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWP 120
            GKCCP+N CCRGADSPTEFTIHGLWPQYNEKGWPSCCTDA F++NEI +L EDI+KYWP
Sbjct: 61  TGKCCPANGCCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAVFSQNEITLLKEDIEKYWP 120

Query: 121 TYRCGTSSTCHRTKGSFWAHE 138
           TYRCGT+S CH TKGSFWAHE
Sbjct: 121 TYRCGTTSNCHGTKGSFWAHE 139

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BLAST of MELO3C024816.2 vs. NCBI nr
Match: XP_023553229.1 (ribonuclease 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 107/141 (75.89%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 1   MASFSIKGKPMV----FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKN 60
           MASFSIK  PMV       L+++L+ VV   +AE PSG  QREFDYFVLALQWPATSCKN
Sbjct: 1   MASFSIKSNPMVVAPAVFLLVLQLVAVV--LAAETPSGGGQREFDYFVLALQWPATSCKN 60

Query: 61  AGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWP 120
            GKCCP+N CCRGADSPTEFTIHGLWPQYNE+GWPSCCTDA FN+NEI +L EDIQKYWP
Sbjct: 61  TGKCCPANGCCRGADSPTEFTIHGLWPQYNERGWPSCCTDAVFNQNEISLLEEDIQKYWP 120

Query: 121 TYRCGTSSTCHRTKGSFWAHE 138
           TYRCGT+  CH TKGSFWAHE
Sbjct: 121 TYRCGTTGNCHGTKGSFWAHE 139

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BLAST of MELO3C024816.2 vs. NCBI nr
Match: XP_022984766.1 (ribonuclease 2-like [Cucurbita maxima])

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 108/143 (75.52%), Postives = 119/143 (83.22%), Query Frame = 0


Query: 1   MASFSIKGKPM-----VFLFLIVELLTVVFGFSAEAPS-GSEQREFDYFVLALQWPATSC 60
           MASF IK  PM     VFL L ++L+ VV   +AE PS G  Q+EFDYFVLALQWPATSC
Sbjct: 1   MASFYIKSNPMVVAPAVFLLLALQLVAVV--LAAETPSGGGGQKEFDYFVLALQWPATSC 60

Query: 61  KNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKY 120
           KN GKCCP+N CCRGADSPTEFTIHGLWPQYNEKGWPSCCTDA FN+NEI +L+EDI+KY
Sbjct: 61  KNTGKCCPANGCCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAVFNQNEISLLSEDIEKY 120

Query: 121 WPTYRCGTSSTCHRTKGSFWAHE 138
           WPTYRCGT+S CH TKGSFWAHE
Sbjct: 121 WPTYRCGTTSNCHGTKGSFWAHE 141

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BLAST of MELO3C024816.2 vs. NCBI nr
Match: XP_022140985.1 (ribonuclease 2-like [Momordica charantia])

HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58
Identity = 106/141 (75.18%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MASFSIKGKP----MVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKN 60
           MAS SIKG P     VFL ++++L    F   A AP   EQREFDYFVLALQWPATSC N
Sbjct: 1   MASSSIKGNPTAAATVFLLVVLQLQAAAFAAGA-APGSEEQREFDYFVLALQWPATSCTN 60

Query: 61  AGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWP 120
            GKCCPSN CCRGA+SPTEFTIHGLWPQY EKGWPSCC+DASF+ENEI  L +DIQKYWP
Sbjct: 61  PGKCCPSNGCCRGAESPTEFTIHGLWPQYEEKGWPSCCSDASFSENEILSLNKDIQKYWP 120

Query: 121 TYRCGTSSTCHRTKGSFWAHE 138
           TYRCGT+STCHRTKGSFWAHE
Sbjct: 121 TYRCGTTSTCHRTKGSFWAHE 140

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BLAST of MELO3C024816.2 vs. TAIR10
Match: AT2G39780.1 (ribonuclease 2)

HSP 1 Score: 158.3 bits (399), Expect = 3.8e-39
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 37  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTD 96
           QREFDYF L+LQWP T C+    CC  NACCRG+D+PT+FTIHGLWP YN+  WPSCC  
Sbjct: 29  QREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYR 88

Query: 97  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           + F E EI  L + ++KYWP+  CG+ S+C+  KGSFW HE
Sbjct: 89  SDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE 129

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BLAST of MELO3C024816.2 vs. TAIR10
Match: AT1G14220.1 (Ribonuclease T2 family protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 37  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPS-CCT 96
           Q +FD+F   LQWP   C  +  CC   +    AD    F IHGLWP YN   WPS C  
Sbjct: 25  QEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAAD----FGIHGLWPNYNGGSWPSNCDP 84

Query: 97  DASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           D+ F+ ++I  L   ++K WPT  C ++        +FW HE
Sbjct: 85  DSQFDRSQISDLVSSLKKNWPTLSCPSNEGF-----NFWEHE 117

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BLAST of MELO3C024816.2 vs. TAIR10
Match: AT1G26820.1 (ribonuclease 3)

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 38  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTD 97
           ++FD+F   LQWP   C +   CC        AD    F IHGLWP Y   GWP +C  D
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAAD----FGIHGLWPNYKTGGWPQNCNPD 79

Query: 98  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           + F++  +  L  D+Q+ WPT  C ++         FW HE
Sbjct: 80  SRFDDLRVSDLMSDLQREWPTLSCPSNDGM-----KFWTHE 111

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BLAST of MELO3C024816.2 vs. TAIR10
Match: AT2G02990.1 (ribonuclease 1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 48/126 (38.10%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 14  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSP 73
           L LI  L+ +   FSA     S   +FD+F    QWP + C    KCC  N+    AD  
Sbjct: 8   LCLISLLVILPSVFSA----SSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAAD-- 67

Query: 74  TEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDIQKYWPTYRCGTSSTCHRTKG 133
             F IHGLWP Y +  +PS C DAS  F+ + I  L   ++K WPT  C + S       
Sbjct: 68  --FGIHGLWPNYKDGTYPSNC-DASKPFDSSTISDLLTSMKKSWPTLACPSGS-----GE 119

Query: 134 SFWAHE 138
           +FW HE
Sbjct: 128 AFWEHE 119

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BLAST of MELO3C024816.2 vs. TAIR10
Match: AT1G14210.1 (Ribonuclease T2 family protein)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-12
Identity = 35/123 (28.46%), Postives = 57/123 (46.34%), Query Frame = 0


Query: 16  LIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTE 75
           +IV LL +    S    S   + +F++F     WP   C +   CCP        ++ ++
Sbjct: 5   IIVSLLILQ---SLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTK----GNTASD 64

Query: 76  FTIHGLWPQYNEKGWPSCCTDAS-FNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFW 135
           F IHGLWPQ+N   WP+ C   + F+ ++I  L   ++K W  +       C   + + W
Sbjct: 65  FIIHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVW---ACPSNETNLW 117

Query: 136 AHE 138
            HE
Sbjct: 125 EHE 117

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BLAST of MELO3C024816.2 vs. Swiss-Prot
Match: sp|P42814|RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.9e-38
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 37  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTD 96
           QREFDYF L+LQWP T C+    CC  NACCRG+D+PT+FTIHGLWP YN+  WPSCC  
Sbjct: 29  QREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYR 88

Query: 97  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           + F E EI  L + ++KYWP+  CG+ S+C+  KGSFW HE
Sbjct: 89  SDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE 129

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BLAST of MELO3C024816.2 vs. Swiss-Prot
Match: sp|P42815|RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 38  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTD 97
           ++FD+F   LQWP   C +   CC        AD    F IHGLWP Y   GWP +C  D
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAAD----FGIHGLWPNYKTGGWPQNCNPD 79

Query: 98  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           + F++  +  L  D+Q+ WPT  C ++         FW HE
Sbjct: 80  SRFDDLRVSDLMSDLQREWPTLSCPSNDGM-----KFWTHE 111

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BLAST of MELO3C024816.2 vs. Swiss-Prot
Match: sp|P80196|RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 38  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTD 97
           ++FD+F    QWPA+ C     CC             +F+IHGLWP Y +  WP +C  +
Sbjct: 26  QDFDFFYFVQQWPASYCDTRRSCCYPTT----GKPDEDFSIHGLWPNYKDGKWPQNCDRE 85

Query: 98  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           +S +E+E   L   ++K WP+  C +S         FW+HE
Sbjct: 86  SSLDESEFSDLISTMEKNWPSLACPSSDGL-----KFWSHE 117

[Close]

BLAST of MELO3C024816.2 vs. Swiss-Prot
Match: sp|P42813|RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13
Identity = 48/126 (38.10%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 14  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSP 73
           L LI  L+ +   FSA     S   +FD+F    QWP + C    KCC  N+    AD  
Sbjct: 8   LCLISLLVILPSVFSA----SSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAAD-- 67

Query: 74  TEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDIQKYWPTYRCGTSSTCHRTKG 133
             F IHGLWP Y +  +PS C DAS  F+ + I  L   ++K WPT  C + S       
Sbjct: 68  --FGIHGLWPNYKDGTYPSNC-DASKPFDSSTISDLLTSMKKSWPTLACPSGS-----GE 119

Query: 134 SFWAHE 138
           +FW HE
Sbjct: 128 AFWEHE 119

[Close]

BLAST of MELO3C024816.2 vs. Swiss-Prot
Match: sp|P80022|RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12
Identity = 40/125 (32.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 14  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSP 73
           LFLI+ ++T        A      ++FD+F    QWP + C     CC        AD  
Sbjct: 9   LFLILLIITQCLSVLNAA------KDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAAD-- 68

Query: 74  TEFTIHGLWPQYNEKGWPS-CCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGS 133
             F IHGLWP  N+  +PS C  ++ +++++I  L   +Q+ WPT  C + S       +
Sbjct: 69  --FGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGS-----GST 118

Query: 134 FWAHE 138
           FW+HE
Sbjct: 129 FWSHE 118

[Close]

BLAST of MELO3C024816.2 vs. TrEMBL
Match: tr|A0A1S3CHX1|A0A1S3CHX1_CUCME (ribonuclease 2-like OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60
           MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC
Sbjct: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60

Query: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120
           CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC
Sbjct: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120

Query: 121 GTSSTCHRTKGSFWAHE 138
           GTSSTCHRTKGSFWAHE
Sbjct: 121 GTSSTCHRTKGSFWAHE 137

[Close]

BLAST of MELO3C024816.2 vs. TrEMBL
Match: tr|A0A0A0L0P9|A0A0A0L0P9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 37  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTD 96
           QREFDYFVLALQWP +SCKN GKCCPSNACCRGA+SPTEFTIHGLWPQYNEKGWPSCCTD
Sbjct: 38  QREFDYFVLALQWPGSSCKNPGKCCPSNACCRGAESPTEFTIHGLWPQYNEKGWPSCCTD 97

Query: 97  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE 138
           ASFNENEI IL EDIQKYWPTYRCGT+STCH+TKGSFWAHE
Sbjct: 98  ASFNENEINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHE 138

[Close]

BLAST of MELO3C024816.2 vs. TrEMBL
Match: tr|A0A1S3CID9|A0A1S3CID9_CUCME (ribonuclease 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501145 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43
Identity = 76/135 (56.30%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 14  LFLIVELLTVV---FGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGA 73
           +F++V ++ ++   +GF+     G EQREFDYFVLALQWP+T C+N  +CCP+NAC R A
Sbjct: 12  VFVVVVVIGIIVDGWGFTV----GKEQREFDYFVLALQWPSTLCRNVTECCPTNACYRRA 71

Query: 74  DSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTK 133
            S T+FTIHGLWP+Y  KGWPSCCT+A+FN+ +IG L ED+ KYWPTYRCG  S+C   K
Sbjct: 72  VSATKFTIHGLWPKYEGKGWPSCCTNATFNQTQIGSLFEDVDKYWPTYRCGLVSSCDNRK 131

Query: 134 GSFWAHERSMGHVQL 146
           GSFWAH+ ++ + ++
Sbjct: 132 GSFWAHQEALENAEI 142

[Close]

BLAST of MELO3C024816.2 vs. TrEMBL
Match: tr|A0A2C9UTY5|A0A2C9UTY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G057200 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 77/137 (56.20%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60
           MAS S+K   +     ++  LT +F    E  +   QREFDYF LALQWP T C++  +C
Sbjct: 1   MASLSVKSTLVHLQLPLLIFLTALFCMVEEVRATQGQREFDYFKLALQWPGTYCQSTRQC 60

Query: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120
           C SNACCRG+++PTEFTIHGLWP YN+  WP+CC  + F+E EI  L + +QKYWPT  C
Sbjct: 61  CSSNACCRGSNAPTEFTIHGLWPDYNDGTWPACCRRSDFDEKEISTLLDGLQKYWPTLSC 120

Query: 121 GTSSTCHRTKGSFWAHE 138
           G+SSTCH TKGSFWAHE
Sbjct: 121 GSSSTCHGTKGSFWAHE 137

[Close]

BLAST of MELO3C024816.2 vs. TrEMBL
Match: tr|A0A2C9UVD8|A0A2C9UVD8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G057200 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 77/137 (56.20%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 1   MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKC 60
           MAS S+K   +     ++  LT +F    E  +   QREFDYF LALQWP T C++  +C
Sbjct: 1   MASLSVKSTLVHLQLPLLIFLTALFCMVEEVRATQGQREFDYFKLALQWPGTYCQSTRQC 60

Query: 61  CPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRC 120
           C SNACCRG+++PTEFTIHGLWP YN+  WP+CC  + F+E EI  L + +QKYWPT  C
Sbjct: 61  CSSNACCRGSNAPTEFTIHGLWPDYNDGTWPACCRRSDFDEKEISTLLDGLQKYWPTLSC 120

Query: 121 GTSSTCHRTKGSFWAHE 138
           G+SSTCH TKGSFWAHE
Sbjct: 121 GSSSTCHGTKGSFWAHE 137

The following BLAST results are available for this feature:

BLAST of MELO3C024816.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462866.1	1.8e-79	100.00	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
XP_022922895.1	3.8e-61	76.60	ribonuclease 2-like [Cucurbita moschata]	[more]
XP_023553229.1	1.1e-60	75.89	ribonuclease 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984766.1	1.2e-59	75.52	ribonuclease 2-like [Cucurbita maxima]	[more]
XP_022140985.1	2.3e-58	75.18	ribonuclease 2-like [Momordica charantia]	[more]

BLAST of MELO3C024816.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39780.1	3.8e-39	59.41	ribonuclease 2	[more]
AT1G14220.1	1.2e-16	38.24	Ribonuclease T2 family protein	[more]
AT1G26820.1	5.9e-16	36.63	ribonuclease 3	[more]
AT2G02990.1	1.1e-14	38.10	ribonuclease 1	[more]
AT1G14210.1	6.8e-12	28.46	Ribonuclease T2 family protein	[more]

BLAST of MELO3C024816.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42814\|RNS2_ARATH	6.9e-38	59.41	Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1	[more]
sp\|P42815\|RNS3_ARATH	1.1e-14	36.63	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
sp\|P80196\|RNLX_SOLLC	1.5e-13	33.66	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
sp\|P42813\|RNS1_ARATH	2.0e-13	38.10	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
sp\|P80022\|RNLE_SOLLC	2.9e-12	32.00	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]

BLAST of MELO3C024816.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHX1\|A0A1S3CHX1_CUCME	1.2e-79	100.00	ribonuclease 2-like OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1	[more]
tr\|A0A0A0L0P9\|A0A0A0L0P9_CUCSA	1.2e-55	92.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1	[more]
tr\|A0A1S3CID9\|A0A1S3CID9_CUCME	6.9e-43	56.30	ribonuclease 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501145 PE=3 SV=1	[more]
tr\|A0A2C9UTY5\|A0A2C9UTY5_MANES	2.0e-42	56.20	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G057200 PE=3 SV=...	[more]
tr\|A0A2C9UVD8\|A0A2C9UVD8_MANES	2.0e-42	56.20	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G057200 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0033897	ribonuclease T2 activity
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018188	RNase_T2_His_AS_1
IPR036430	RNase_T2-like_sf
IPR001568	RNase_T2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0007568	aging
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0010507	negative regulation of autophagy
biological_process	GO:0008150	biological_process
biological_process	GO:0044248	cellular catabolic process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005622	intracellular
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0010168	ER body
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005773	vacuole
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0033897	ribonuclease T2 activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024816.2.1	MELO3C024816.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 42..137 e-value: 3.2E-19 score: 69.7
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 35..139
IPR036430	Ribonuclease T2-like superfamily	GENE3D	G3DSA:3.90.730.10		coord: 36..150 e-value: 2.1E-35 score: 124.3
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	SSF55895	Ribonuclease Rh-like	coord: 39..137
None	No IPR available	PANTHER	PTHR11240:SF37	SUBFAMILY NOT NAMED	coord: 35..139
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 76..83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024816.2	Csa4G109040	Cucumber (Chinese Long) v2	cumedB302
MELO3C024816.2	CSPI04G09320	Wild cucumber (PI 183967)	cpimedB306
MELO3C024816.2	Cucsa.398180	Cucumber (Gy14) v1	cgymedB649
MELO3C024816.2	CmaCh16G002600	Cucurbita maxima (Rimu)	cmamedB357
MELO3C024816.2	CmoCh16G002670	Cucurbita moschata (Rifu)	cmomedB339
MELO3C024816.2	Lsi03G009530	Bottle gourd (USVL1VR-Ls)	lsimedB283
MELO3C024816.2	Cp4.1LG14g05080	Cucurbita pepo (Zucchini)	cpemedB240
MELO3C024816.2	CsGy4G009070	Cucumber (Gy14) v2	cgybmedB271
MELO3C024816.2	Cla002480	Watermelon (97103) v1	medwmB484
MELO3C024816.2	ClCG10G009300	Watermelon (Charleston Gray)	medwcgB447
MELO3C024816.2	Cla97C10G192460	Watermelon (97103) v2	medwmbB457
MELO3C024816.2	Carg16789	Silver-seed gourd	carmedB0870
MELO3C024816.2	CsaV3_4G009480	Cucumber (Chinese Long) v3	cucmedB312

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024816.2	Cucurbita maxima (Rimu)	cmamedB785
MELO3C024816.2	Cucurbita moschata (Rifu)	cmomedB782
MELO3C024816.2	Cucurbita pepo (Zucchini)	cpemedB490
MELO3C024816.2	Silver-seed gourd	carmedB0386