CmaCh16G000840 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	tRNA dimethylallyltransferase
Location	Cma_Chr16 : 364484 .. 366858 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCGCTTTCTTTTAGGAGTTTCGTTCTTAGTCCTCCGAGTCCTGCCTTGAAAGTGGGAGGACCCTCTCTCTGTGCTTCCATTTCCATCAGGAGTTTGCAAATAAATTAGCGATTCTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCTATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTTCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCCCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTTCGCAATAGGTCTCCTTTTTGTGATTTTATGACATGGATTTGTGTTTTTCAATCTGGATTTTGGTTCTTTATCGTTTAATTGCGTTTTCTGATTAGGGTTATTTCGTGAATTGAATTGAGGATGAATCATTCAGTGTTGCCCTACATGTTACTTTCTTATCAGGAAACAAACTTTAGTTTGAGAATTTTGTTGGAGTCCTTTTCCCATGATTTTTCTTTAGGTTGCTTAACTTGTGTAAGATATCGATTGCATTTTGATTCCGGGGTTGTGTTCATTCAAGCATCCATATGACAACTGCTTCGTTTAGGTTGCTTAAGTGATATGCTTGTTTTATGTATTAAATCTCACAGAGAATAGAAAAATGATGCCTTGCAGTTGTCATTATTGAAACTATGGTCAAGATTGAGCTGGGAGAATGGCAATTCTCTATTATTTGGCCTCTGGATTGGTTATAATAGAGACGGGGTTTTGTAAATGTTTAAGTAGGATATTGAGCATGTAAAATTTTGAGGTATTGAGCGGTCAACCATCCACTCTCGAGATTCATATGGATCAATCGACCTCCAATGCAATATAATTGTCCTGAAAGAGGGAGAGAGTTTGCAGCGTGAACTTTAAATGGAAACGGGATCTGTTCTGGTTTTCAGCGGTTGATATTGAAGTGTGAACATTTTGCAGATGCAAAAGAACATTAGTCATTCCTGCAAATGGAGGACCTTAGTTTAGGCTCCTCTGTTACATCCAGTTCAATTTATCCTTGTAGAATAGATTTAGTTGCACAGCCTAGCTCAGTCTCTTTTCCACATGCCAGAAACTTTCCTAACACATGACCAGGGAGAATTGTTATAGCCTGGCTGTTACCGTTGTTTTGAAACTTGATCGGGTTTTAAAATCTCTTGGATGCTCGTAAACGTCTTGCAGGGCATCAAAATGTTTAAATCACGAATGAAACTTACCCAACTTTTTGGTTGAGAGTAGAGAGAGGCTAGCTGGTGCGTTTCAATTCTGGCTTTTGAGTCTGATAATTTGTTATCAATTGTTCTGTAAGAATACTTTCTTTCTTACCATTCAATTGTCAAACACAACTATTACAATATAAGAAAACGATGATAACCTTCCAGCAATCTCGAGAGTGCCAGAAATCGAACCGTTGTTCCATCCAAAATACAAAACATAGTGATAACAAAGAGACTACTTACTAATACACTACTGCTAGCCTAACAAACCTCCCTAAACGAATTATCCTCAGTCAATTTCCATGTTACCTCTTCTAGTGAATACACGATTGGGGCCGAAGACATTGCCCCCAACTCATCACTCACATGTGCACACACGAAAAGGTAAACAGGAACCAACCGAAAATGGCAGTTCGATTATTGGTGTTGTGGTGAAAAGTTCTGTTACTGGCTTTGAATTTGATAGTTACACAATGCACATGTTGGTTTTGCAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCTTGAACACAGTTTATCACTACTCCATGTGTTGCAATCATTCATTCCTTTCTGTCAATATATATATAACATAATTTCTTGATCTATTTTCTTCCCATTCCACAATTGGTAGCAACGGAATCCACTTTTTGTTCACCACACTCTACCTTTCAATGCTGTACTGCTTTGATGAACAGGGGAATAAAATTGATAGAACGCATTCTTCTCCCCACAAAATTTACTGTGGTACAGATGAACATTGATGCAGTTTGAGAATGGAATTTGGGAAGATACTTTACAAA

mRNA sequence

ACTCGCTTTCTTTTAGGAGTTTCGTTCTTAGTCCTCCGAGTCCTGCCTTGAAAGTGGGAGGACCCTCTCTCTGTGCTTCCATTTCCATCAGGAGTTTGCAAATAAATTAGCGATTCTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCTATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTTCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCCCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCTTGAACACAGTTTATCACTACTCCATGTGTTGCAATCATTCATTCCTTTCTGTCAATATATATATAACATAATTTCTTGATCTATTTTCTTCCCATTCCACAATTGGTAGCAACGGAATCCACTTTTTGTTCACCACACTCTACCTTTCAATGCTGTACTGCTTTGATGAACAGGGGAATAAAATTGATAGAACGCATTCTTCTCCCCACAAAATTTACTGTGGTACAGATGAACATTGATGCAGTTTGAGAATGGAATTTGGGAAGATACTTTACAAA

Coding sequence (CDS)

ATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCTATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTTCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCCCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCTTGA

Protein sequence

MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP

Homology

[Close]

BLAST of CmaCh16G000840 vs. TrEMBL
Match: W9RU92_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011480 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 111/149 (74.50%), Postives = 121/149 (81.21%), Query Frame = 1


Query: 16  PSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASEDEWLNKL 75
           PS V   P +S     IS K P    P+++  RK      SKSSEAEELS+ EDEWL KL
Sbjct: 24  PSKVPESPALSP---SISRKFPAFCKPLARPPRKLHLRSRSKSSEAEELSSPEDEWLKKL 83

Query: 76  PEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSG 135
           P+KKKPLYSHSLPCIEAWL++LGFYQS EDRAVWL+EK +WHAQLSLDVTDLYIRYLKSG
Sbjct: 84  PDKKKPLYSHSLPCIEAWLRSLGFYQSKEDRAVWLVEKADWHAQLSLDVTDLYIRYLKSG 143

Query: 136 PGNLEKDVERRFSYALSREDIENAVLGGP 165
           PGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 144 PGNLEKDVERRFSYALSREDIENAVLGGP 169

[Close]

BLAST of CmaCh16G000840 vs. TrEMBL
Match: B9I521_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01190g PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-54
Identity = 106/153 (69.28%), Postives = 125/153 (81.70%), Query Frame = 1


Query: 12  TNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASEDEW 71
           T+  PS VS  P   S+  P+ +K      P+ +  R    I+S KSSEAEE+S++EDEW
Sbjct: 21  TSTHPSKVSYFP---SLHPPLFSKSLSCPYPLCKFLRNPKRIISLKSSEAEEISSTEDEW 80

Query: 72  LNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRY 131
           L +LP+KKKPLYSHSLPCIEAWLK+LGFYQS EDRA+W IEKP+WHAQLSLDVTDL+IRY
Sbjct: 81  LQRLPDKKKPLYSHSLPCIEAWLKDLGFYQSKEDRAIWFIEKPDWHAQLSLDVTDLFIRY 140

Query: 132 LKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           LK+GPGNLEKD+ERRFSYALSREDIENA+LGGP
Sbjct: 141 LKNGPGNLEKDMERRFSYALSREDIENAILGGP 170

[Close]

BLAST of CmaCh16G000840 vs. TrEMBL
Match: A0A061G0N6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015318 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 1


Query: 43  ISQSFRKSLSIVSSKSSEAEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQS 102
           +S S RK ++ VSSKSSEAEEL  +EDEWLN+LP+K KPLYSHSLPCIEAWL++LGF QS
Sbjct: 44  VSHSQRKIVTFVSSKSSEAEELPTAEDEWLNRLPDKNKPLYSHSLPCIEAWLRSLGFCQS 103

Query: 103 NEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLG 162
            EDRAVWLIEKP+WHAQLSLDVTDLYIRYLKSGPGNLE+DVERRFSYALSREDIENA+LG
Sbjct: 104 REDRAVWLIEKPDWHAQLSLDVTDLYIRYLKSGPGNLERDVERRFSYALSREDIENAILG 163

Query: 163 GP 165
           GP
Sbjct: 164 GP 165

[Close]

BLAST of CmaCh16G000840 vs. TrEMBL
Match: E0CUL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02270 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-53
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 42  PISQSFRKSLSIVSSKSSEAEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQ 101
           P +   RKSL++V S SS AE  SA+EDEWL KLPEKKKPLYSHSLPC+EAWL+NLGF+Q
Sbjct: 33  PPNSKPRKSLTLVFSSSSGAELSSAAEDEWLKKLPEKKKPLYSHSLPCVEAWLRNLGFFQ 92

Query: 102 SNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVL 161
           S EDRA+W +EKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENA+L
Sbjct: 93  SKEDRAIWFVEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAIL 152

Query: 162 GGP 165
           GGP
Sbjct: 153 GGP 155

[Close]

BLAST of CmaCh16G000840 vs. TrEMBL
Match: A0A0D2PAE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G116000 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-53
Identity = 101/122 (82.79%), Postives = 112/122 (91.80%), Query Frame = 1


Query: 43  ISQSFRKSLSIVSSKSSEAEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQS 102
           +SQ  RK  + VSSKSSEA EL  +EDEWL++LP+K KPLYSHSLPCIEAWL++LGFYQS
Sbjct: 38  VSQCQRKIATFVSSKSSEAGELPTAEDEWLSRLPDKNKPLYSHSLPCIEAWLRSLGFYQS 97

Query: 103 NEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLG 162
            EDRAVWLIEKP+WHAQLSLDVTDLYIRYLKSGPGNLE+DVERRFSYALSREDIENA+LG
Sbjct: 98  REDRAVWLIEKPDWHAQLSLDVTDLYIRYLKSGPGNLERDVERRFSYALSREDIENAILG 157

Query: 163 GP 165
           GP
Sbjct: 158 GP 159

[Close]

BLAST of CmaCh16G000840 vs. TAIR10
Match: AT5G52960.1 (AT5G52960.1 unknown protein)

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-54
Identity = 96/117 (82.05%), Postives = 109/117 (93.16%), Query Frame = 1


Query: 48  RKSLSIVSSKSSEAEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRA 107
           RK L++VSSKSS+AEE+S +EDEWL KLPEK KPLYSHSLPCIEAWL+ LGFYQS +DRA
Sbjct: 54  RKPLTLVSSKSSDAEEVSDTEDEWLKKLPEKNKPLYSHSLPCIEAWLRKLGFYQSKDDRA 113

Query: 108 VWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           VWLI+KP+WHAQLSLDVTDL IRY+KSGPGNLE+D+ERRFSYALSRED ENA+LGGP
Sbjct: 114 VWLIQKPDWHAQLSLDVTDLCIRYMKSGPGNLERDMERRFSYALSREDTENAILGGP 170

[Close]

BLAST of CmaCh16G000840 vs. NCBI nr
Match: gi|659077667|ref|XP_008439322.1| (PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 6.9e-81
Identity = 149/164 (90.85%), Postives = 154/164 (93.90%), Query Frame = 1


Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAF SLC NVFPSP SNH EISSIWRPISTKLPQL NPISQ  RK+ +IVSSKSSE
Sbjct: 1   MSITFAFHSLCNNVFPSPTSNHLEISSIWRPISTKLPQLSNPISQPLRKTFTIVSSKSSE 60

Query: 61  AEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELS+ EDEWLNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS EDRA+WLIEKPEWHAQL
Sbjct: 61  AEELSSPEDEWLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKEDRAMWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]

BLAST of CmaCh16G000840 vs. NCBI nr
Match: gi|778680932|ref|XP_011651422.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209888, partial [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 4.5e-72
Identity = 137/157 (87.26%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 9   SLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEE-LSAS 68
           ++C NVFPSP SNH EISSIWRPISTKLPQ  NPISQS R S +IVSSKSSEAEE LS+ 
Sbjct: 11  NVCNNVFPSPTSNHLEISSIWRPISTKLPQSSNPISQSLRNSFTIVSSKSSEAEEELSSP 70

Query: 69  EDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDL 128
           EDE LNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS +D AVWLIEKPEWHAQLSLDVTDL
Sbjct: 71  EDECLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKKDXAVWLIEKPEWHAQLSLDVTDL 130

Query: 129 YIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           Y+RYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 131 YVRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 167

[Close]

BLAST of CmaCh16G000840 vs. NCBI nr
Match: gi|1009173970|ref|XP_015868102.1| (PREDICTED: uncharacterized protein LOC107405548 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 113/156 (72.44%), Postives = 127/156 (81.41%), Query Frame = 1


Query: 13  NVFPSPVS----NHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASE 72
           ++F S  S    N P+  + +  + +  P   +P+S S RKS   VSSKSSEAEELS  E
Sbjct: 13  DIFSSTTSLTPQNCPKFPTPFPSLLSNFPSWSHPLSLSARKSCISVSSKSSEAEELSPPE 72

Query: 73  DEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLY 132
           DEWL KLP+KKKPLYSHSLPCIEAWL +LGFYQS +DRAVWL+EKP+WHAQLSLDVTDLY
Sbjct: 73  DEWLQKLPDKKKPLYSHSLPCIEAWLGSLGFYQSKDDRAVWLVEKPDWHAQLSLDVTDLY 132

Query: 133 IRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           IRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 133 IRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 168

[Close]

BLAST of CmaCh16G000840 vs. NCBI nr
Match: gi|1009182166|ref|XP_015872562.1| (PREDICTED: uncharacterized protein LOC107409651, partial [Ziziphus jujuba])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 110/144 (76.39%), Postives = 122/144 (84.72%), Query Frame = 1


Query: 21  NHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASEDEWLNKLPEKKK 80
           N P+  + +  + +  P   +P+S S RKS   VSSKSSEAEELS  EDEWL KLP+KKK
Sbjct: 9   NCPKFPTPFPSLLSNFPSWSHPLSLSARKSCISVSSKSSEAEELSPPEDEWLQKLPDKKK 68

Query: 81  PLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLE 140
           PLYSHSLPCIEAWL +LGFYQS +DRAVWL+EKP+WHAQLSLDVTDLYIRYLKSGPGNLE
Sbjct: 69  PLYSHSLPCIEAWLGSLGFYQSKDDRAVWLVEKPDWHAQLSLDVTDLYIRYLKSGPGNLE 128

Query: 141 KDVERRFSYALSREDIENAVLGGP 165
           KDVERRFSYALSREDIENAVLGGP
Sbjct: 129 KDVERRFSYALSREDIENAVLGGP 152

[Close]

BLAST of CmaCh16G000840 vs. NCBI nr
Match: gi|743915958|ref|XP_011001945.1| (PREDICTED: uncharacterized protein LOC105109055 [Populus euphratica])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 108/153 (70.59%), Postives = 125/153 (81.70%), Query Frame = 1


Query: 12  TNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSASEDEW 71
           T+  PS VS  P   S+  P+ +K      P+    R    IVSSKSSEAEE+S++EDEW
Sbjct: 21  TSTHPSKVSFFP---SLHPPLFSKSLSCPYPLCNFLRNPKRIVSSKSSEAEEISSTEDEW 80

Query: 72  LNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRY 131
           L +LP+KKKPLYSHSLPCIEAWLK+LGFYQS EDRA+W IEKP+WHAQLSLDVTDL+IRY
Sbjct: 81  LQRLPDKKKPLYSHSLPCIEAWLKDLGFYQSKEDRAIWFIEKPDWHAQLSLDVTDLFIRY 140

Query: 132 LKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           LK+GPGNLEKD+ERRFSYALSREDIENA+LGGP
Sbjct: 141 LKNGPGNLEKDMERRFSYALSREDIENAILGGP 170

The following BLAST results are available for this feature:

BLAST of CmaCh16G000840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G000840 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RU92_9ROSA	1.7e-54	74.50	Uncharacterized protein OS=Morus notabilis GN=L484_011480 PE=4 SV=1	[more]
B9I521_POPTR	2.9e-54	69.28	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01190g PE=4 SV=1	[more]
A0A061G0N6_THECC	1.9e-53	83.61	Uncharacterized protein OS=Theobroma cacao GN=TCM_015318 PE=4 SV=1	[more]
E0CUL9_VITVI	7.2e-53	82.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02270 PE=4 SV=...	[more]
A0A0D2PAE3_GOSRA	7.2e-53	82.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G116000 PE=4 SV=1	[more]

BLAST of CmaCh16G000840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52960.1	2.6e-54	82.05	unknown protein	[more]

BLAST of CmaCh16G000840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077667\|ref\|XP_008439322.1\|	6.9e-81	90.85	PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]	[more]
gi\|778680932\|ref\|XP_011651422.1\|	4.5e-72	87.26	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209888, partial [C...	[more]
gi\|1009173970\|ref\|XP_015868102.1\|	3.4e-56	72.44	PREDICTED: uncharacterized protein LOC107405548 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009182166\|ref\|XP_015872562.1\|	3.4e-56	76.39	PREDICTED: uncharacterized protein LOC107409651, partial [Ziziphus jujuba]	[more]
gi\|743915958\|ref\|XP_011001945.1\|	1.1e-54	70.59	PREDICTED: uncharacterized protein LOC105109055 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021489	DUF3143

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000840.1	CmaCh16G000840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021489	Protein of unknown function DUF3143	PFAM	PF11341	DUF3143	coord: 97..163 score: 3.9
None	No IPR available	PANTHER	PTHR35765	FAMILY NOT NAMED	coord: 1..164 score: 1.6
None	No IPR available	PANTHER	PTHR35765:SF2	SUBFAMILY NOT NAMED	coord: 1..164 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G000840	Cucsa.012810	Cucumber (Gy14) v1	cgycmaB0549
CmaCh16G000840	Cla004219	Watermelon (97103) v1	cmawmB316
CmaCh16G000840	MELO3C006968	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G000840	ClCG05G008590	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G000840	CmoCh16G000870	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G000840	Lsi05G011700	Bottle gourd (USVL1VR-Ls)	cmalsiB312
CmaCh16G000840	Cp4.1LG14g06340	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G000840	MELO3C006968.2	Melon (DHL92) v3.6.1	cmamedB344
CmaCh16G000840	Cla97C05G090740	Watermelon (97103) v2	cmawmbB346
CmaCh16G000840	Bhi01G001058	Wax gourd	cmawgoB0439
CmaCh16G000840	Carg15092	Silver-seed gourd	carcmaB1366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G000840	Wax gourd	cmawgoB0428
CmaCh16G000840	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh16G000840	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh16G000840	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G000840	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh16G000840	Cucumber (Gy14) v1	cgycmaB0600
CmaCh16G000840	Cucurbita moschata (Rifu)	cmacmoB319
CmaCh16G000840	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G000840	Cucurbita moschata (Rifu)	cmacmoB333
CmaCh16G000840	Wild cucumber (PI 183967)	cmacpiB328
CmaCh16G000840	Wild cucumber (PI 183967)	cmacpiB346
CmaCh16G000840	Cucumber (Chinese Long) v2	cmacuB322
CmaCh16G000840	Cucumber (Chinese Long) v2	cmacuB342
CmaCh16G000840	Melon (DHL92) v3.5.1	cmameB283
CmaCh16G000840	Watermelon (Charleston Gray)	cmawcgB289
CmaCh16G000840	Watermelon (Charleston Gray)	cmawcgB295
CmaCh16G000840	Watermelon (97103) v1	cmawmB318
CmaCh16G000840	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G000840	Cucurbita pepo (Zucchini)	cmacpeB343
CmaCh16G000840	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G000840	Bottle gourd (USVL1VR-Ls)	cmalsiB298
CmaCh16G000840	Bottle gourd (USVL1VR-Ls)	cmalsiB318
CmaCh16G000840	Bottle gourd (USVL1VR-Ls)	cmalsiB320
CmaCh16G000840	Cucumber (Gy14) v2	cgybcmaB336
CmaCh16G000840	Cucumber (Gy14) v2	cgybcmaB343
CmaCh16G000840	Cucumber (Gy14) v2	cgybcmaB618
CmaCh16G000840	Melon (DHL92) v3.6.1	cmamedB326
CmaCh16G000840	Melon (DHL92) v3.6.1	cmamedB338
CmaCh16G000840	Silver-seed gourd	carcmaB0713
CmaCh16G000840	Silver-seed gourd	carcmaB0752
CmaCh16G000840	Cucumber (Chinese Long) v3	cmacucB0398
CmaCh16G000840	Cucumber (Chinese Long) v3	cmacucB0376
CmaCh16G000840	Cucumber (Chinese Long) v3	cmacucB0384
CmaCh16G000840	Cucumber (Chinese Long) v3	cmacucB0402
CmaCh16G000840	Cucumber (Chinese Long) v3	cmacucB0408
CmaCh16G000840	Watermelon (97103) v2	cmawmbB324
CmaCh16G000840	Watermelon (97103) v2	cmawmbB344