Carg15092 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGTCCTACCTTGAAAGTGGGAGGACCCTCTCTCTGTGCTTCCATTTCTATCAGGAGTTTGCAAATAAATTAGCGATTCTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTGAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTGAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTTCGCAATAGGTCTCCTTTTTGTGATTTTATGACATGGATTTGTGTTTTTCAATCTGGCTTTTGGTTCTTTATCGTTTAATTGCGTTTTCTGATTAGGGTTATTTCGTGAATTGAATTGTTGGAGTTGCCCTACATGTTACTTTCTTATCAGGAAACAAACGTTAGTTTGAGAATTTTGTTGGAGTCCTTTTCCCATGATTTTTCTTTAGGTTGTTTAACTTGTGTAAGATATCGATGGCATTTTGATTCTGGGGTTGTGTTCATTCAGGCATCCATATGACAACTGCTTCGTTTAGTTTGCTTAAGTGATATGCTTGTTTTATGTATTAAATCTCCACAGAGAATAGAAAACTGATGCCTTGCAGTTGTCATTATTGAAACTATGGTCAAGATTGAGCTGGGAGAATGGGCAATTCTCTATTATTTGGCCTCTGGACTGGTTATAATAGAGAGGTGGGTTTGTAAATGGTTAAGTAGGATATTGAGCGTGTAAAATTTTGAGGTATTGAGCAGTCAACCATCCACTCTCGAGATTCATATGGATCAATCGACCTCGAATGCAATATAATTGTCCAGAAAGAGGGAGAGAGTTTGCAGTGTGTAAACTTCAAAGGTTGCTTACAACATTTAAATGGAAACGGGATCTGTTCCGGTTTTCAGCGGTCTATATTGAAGTGTGAACATTTTGCAGATGCAAAAGAACATTAGTCATTCCTGCAAATGGAGGACCTTAGTTTAGGCTCCTCTGTTACATCCAGTTCAATTTATCCTTGTAATATAGATTTAGTTGCACAGCCTAGCTCAGTCTCTTTTCCACATGCCAATAACTTTCCCAACAGATGACCAGGGAGAATTGTTATAGCCTGGCTGTTACCGTTGTTTTGAAACTTGATCGGGTTTTAAATTCTCTTGGTTGCTCGTAAACGTCTTGCAGTGCACCAAAATGTTTAATTCACGAATGAAACTTCCCCAACTTTTTGGTTGTGAGAGTAGAGAGAGGCTAGCTGGTGCATTTCAATTCTGGCTTTTGAGTCTGATAATTTGTTATCAATTGTTCTGTAAGAATACTTTCTTTCTTACGATTCGATTGTCAAACACAACTATTACAATATAAGAAAACGATGATAACCTTCCAGCAATCTCGAGAGTGCCAGAAATTGAACCGTTGTTGCATCCAAAATACAAAGCATAGTGATAACAAAGAGACTACTTACTAATATACAAACCTACCTAAACGAATTATCCTCGAGTCAATTCCCATGTTACCTCTTCTAGTGAATACACGATTGGGGCCGAAGACATTGCCCCCAACTCATCACTCACACGCGCACACACGAGAAGGTAAACAGGAACTGAAAATGCCAGTTCTGTTACTAGCTTTGAATTTGATAGTTACACAATGCACATGTTGGTTTTGCAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAACGCTGTACTCGGAGGACCTTGAACACAGTTAATCATTACTCCATGTATTGCAATCATTCATTCCTTTCTGTCAATATATATATATATATATATATA GAGTCCTACCTTGAAAGTGGGAGGACCCTCTCTCTGTGCTTCCATTTCTATCAGGAGTTTGCAAATAAATTAGCGATTCTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTGAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTGAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAACGCTGTACTCGGAGGACCTTGAACACAGTTAATCATTACTCCATGTATTGCAATCATTCATTCCTTTCTGTCAATATATATATATATATATATATA ATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCATCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTGAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTGAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTCTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAACGCTGTACTCGGAGGACCTTGA MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSLRKSLSIVSSKSSEAEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
BLAST of Carg15092 vs. NCBI nr
Match: XP_022922878.1 (uncharacterized protein LOC111430721 [Cucurbita moschata] >XP_023552331.1 uncharacterized protein LOC111810028 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Carg15092 vs. NCBI nr
Match: XP_022984153.1 (uncharacterized protein LOC111482568 [Cucurbita maxima]) HSP 1 Score: 330.9 bits (847), Expect = 2.5e-87 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Carg15092 vs. NCBI nr
Match: XP_008439322.1 (PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]) HSP 1 Score: 313.2 bits (801), Expect = 5.4e-82 Identity = 151/164 (92.07%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of Carg15092 vs. NCBI nr
Match: XP_022141250.1 (uncharacterized protein LOC111011693 [Momordica charantia]) HSP 1 Score: 294.3 bits (752), Expect = 2.6e-76 Identity = 143/164 (87.20%), Postives = 151/164 (92.07%), Query Frame = 0
BLAST of Carg15092 vs. NCBI nr
Match: XP_011651422.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209888, partial [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 3.5e-73 Identity = 139/157 (88.54%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of Carg15092 vs. TAIR10
Match: AT5G52960.1 (unknown protein) HSP 1 Score: 208.0 bits (528), Expect = 4.4e-54 Identity = 108/170 (63.53%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of Carg15092 vs. TrEMBL
Match: tr|A0A1S3AY50|A0A1S3AY50_CUCME (uncharacterized protein LOC103484146 OS=Cucumis melo OX=3656 GN=LOC103484146 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.6e-82 Identity = 151/164 (92.07%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of Carg15092 vs. TrEMBL
Match: tr|A0A1Q3CXF1|A0A1Q3CXF1_CEPFO (DUF3143 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28341 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 5.8e-56 Identity = 109/151 (72.19%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of Carg15092 vs. TrEMBL
Match: tr|A0A2I4GTX0|A0A2I4GTX0_9ROSI (uncharacterized protein LOC109010861 OS=Juglans regia OX=51240 GN=LOC109010861 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.3e-55 Identity = 117/169 (69.23%), Postives = 138/169 (81.66%), Query Frame = 0
BLAST of Carg15092 vs. TrEMBL
Match: tr|W9RU92|W9RU92_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011480 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.9e-55 Identity = 112/149 (75.17%), Postives = 122/149 (81.88%), Query Frame = 0
BLAST of Carg15092 vs. TrEMBL
Match: tr|A0A2P4I6I0|A0A2P4I6I0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_08501 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.4e-54 Identity = 114/161 (70.81%), Postives = 131/161 (81.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |