CmaCh14G016850 (gene) Cucurbita maxima (Rimu)

NameCmaCh14G016850
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_3
LocationCma_Chr14 : 12539675 .. 12540842 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTAGCTTTGGAATTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGAACCTCTCCCTCATCCACATGTTTCTCTTCAGGTGCACTTCCTTTTCCCAACATTTATATAGCTTTGCGATGGAGATGGGATTTAGTATTTTCAAATTTTCAATCACTTGGGTATTTCTCTCTGTTTTGGCTGTGTAATCCAACAAGATCGATCAATTTGCAGGCTCTGTCTCATGGAGGGCACCACCCCACACAGCTACTGGCAGGGCATGAACATGCCACCGTAGCCTACAGCAGCGTAAGCAAGGGCACCGGCGTGTTCATCCCAAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGAAACAATAACATGAAGCCAAACCGACAGTTTCAAATCAATATTGATGTGAACTCACAAGCATCTTCCAACAACCATTTGATGCGTCCTAAAAAGGGTTAAGGATTCGAAGAATTTGAGGAAAAGGGTATCAGAATTCAGATTAAATCAATAATTCAGTCACCAAGTATTAAGTTAGTGGTGATGGCTGTACATGGAAGAAGAAGAAGCCATAGTATTAGACTGTTAATCACTGGGTTTTAAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTAAGCCTCCTCCCCTCCCTAAGTGAAAAATTTATGGTTGTTCTAATAATAATATGCCGCTTTCATTCTCTCTCTGTTTTGTTTTGTTTTGGGTTTGGAGAGAAAGAGAGAGAGAGAGAGGTGCCATGAAACATGCTCTGTTTTGTTGATCTGAATCACAAACAGAATCATCAGACTCTGCAAAAGCTTAGATGAGTTGAATCCATGTTTTGAAGATATGGCCTTAACTGGCATCCCTGCAATGGCACATGAGGAGGCTTTCATGCTTCAATAGCTGTCTGGATCTTTGTTGCAGAGAAACCTAAAGTTCTCTAAAACATATTCACAGTGAAACAGAGGAGACAGAGAGAGAGATTTCTAAGGCTTTTTGGATTCTGTACATATTTTTTGAATCTGAAGTACACCACAATGAGGTGTGTATTATGAGGGAAGGATTAGTGAAAATGGCTTTCAAATTATAGTCACTAACTAGAAATATTTATTTAATTC

mRNA sequence

ATGGAGGTAGCTTTGGAATTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGAACCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGGGCACCACCCCACACAGCTACTGGCAGGGCATGAACATGCCACCGTAGCCTACAGCAGCGTAAGCAAGGGCACCGGCGTGTTCATCCCAAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGAAACAATAACATGAAGCCAAACCGACAGTTTCAAATCAATATTGATGTGAACTCACAAGCATCTTCCAACAACCATTTGATGCGTCCTAAAAAGGGTTAAGGATTCGAAGAATTTGAGGAAAAGGGTATCAGAATTCAGATTAAATCAATAATTCAGTCACCAAGTATTAAGTTAGTGGTGATGGCTGTACATGGAAGAAGAAGAAGCCATAGTATTAGACTGTTAATCACTGGGTTTTAAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTAAGCCTCCTCCCCTCCCTAAGTGAAAAATTTATGGTTGTTCTAATAATAATATGCCGCTTTCATTCTCTCTCTGTTTTGTTTTGTTTTGGGTTTGGAGAGAAAGAGAGAGAGAGAGAGGTGCCATGAAACATGCTCTGTTTTGTTGATCTGAATCACAAACAGAATCATCAGACTCTGCAAAAGCTTAGATGAGTTGAATCCATGTTTTGAAGATATGGCCTTAACTGGCATCCCTGCAATGGCACATGAGGAGGCTTTCATGCTTCAATAGCTGTCTGGATCTTTGTTGCAGAGAAACCTAAAGTTCTCTAAAACATATTCACAGTGAAACAGAGGAGACAGAGAGAGAGATTTCTAAGGCTTTTTGGATTCTGTACATATTTTTTGAATCTGAAGTACACCACAATGAGGTGTGTATTATGAGGGAAGGATTAGTGAAAATGGCTTTCAAATTATAGTCACTAACTAGAAATATTTATTTAATTC

Coding sequence (CDS)

ATGGAGGTAGCTTTGGAATTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGAACCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGGGCACCACCCCACACAGCTACTGGCAGGGCATGAACATGCCACCGTAGCCTACAGCAGCGTAAGCAAGGGCACCGGCGTGTTCATCCCAAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGAAACAATAACATGAAGCCAAACCGACAGTTTCAAATCAATATTGATGTGAACTCACAAGCATCTTCCAACAACCATTTGATGCGTCCTAAAAAGGGTTAA

Protein sequence

MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPHPHVSLQALSHGGHHPTQLLAGHEHATVAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLMRPKKG
BLAST of CmaCh14G016850 vs. TrEMBL
Match: A0A0A0LAE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-47
Identity = 102/125 (81.60%), Postives = 109/125 (87.20%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPHPHVSLQALSHGGHHPTQLLAGHEHA- 60
           MEVALE EDDLFFADLSRQLSLLLMDDNE+PLPHPHVSLQALSHG H+PT+ LA HEHA 
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  ----TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLM 120
                 AY+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ  SNNH M
Sbjct: 61  AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120

BLAST of CmaCh14G016850 vs. TrEMBL
Match: A0A067KYS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.1e-17
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLP-HPHVSLQALSHGGHHPTQLLAGHEHA 60
           MEVA+EFEDDL FADLS+Q+SLL+MDD+E+P+  +P VS Q  S G        A     
Sbjct: 1   MEVAMEFEDDLLFADLSKQISLLIMDDDEDPVANYPSVSFQDFSRG-----NCPAAASSF 60

Query: 61  TVAYSSVSKGTGVFIPRSLQPARKQRRGRN---NNMKPNRQFQINIDVNSQASSNNHLMR 120
                  SKGTGVFIPRS QP RK R+GR+   N+ K NR  Q N  + SQ S +N L  
Sbjct: 61  VCEQRRESKGTGVFIPRSSQPRRKDRQGRHSSFNSSKSNRLHQDNTRMVSQVSYSNSLY- 118

BLAST of CmaCh14G016850 vs. TrEMBL
Match: A0A0B2RZE0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007287 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-16
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 1

Query: 1  MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPH-PHVSLQALSHGGHHPTQLLAGHEHA 60
          MEVA+E EDDLFFADLS++++LL+MD++E+PL   P  SLQA S   H P Q    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNN 92
            A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 --ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of CmaCh14G016850 vs. TrEMBL
Match: K7M0W4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G207100 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-16
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 1

Query: 1  MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPH-PHVSLQALSHGGHHPTQLLAGHEHA 60
          MEVA+E EDDLFFADLS++++LL+MD++E+PL   P  SLQA S   H P Q    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNN 92
            A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 --ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of CmaCh14G016850 vs. TrEMBL
Match: A0A0B2RET3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.7e-16
Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPH-PHVSLQALSHGGHHPTQLLAGHEHA 60
           MEVA+E EDDLFFADLS++++LL+MD++E+PL   P  SLQA S   H P Q    +EH 
Sbjct: 1   MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61  TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQ 100
             A    SKGTGVFIP++ QP RKQR+GR NN     Q Q
Sbjct: 61  --ALRRESKGTGVFIPQATQPRRKQRKGRANNSYAKHQKQ 97

BLAST of CmaCh14G016850 vs. TAIR10
Match: AT5G19190.1 (AT5G19190.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPHPHVSLQALSHGGHHPTQLLAGHEHAT 60
           M + LE +DD+FFAD+S+Q+SLL+MD++E   P   VSL + S           G++ A 
Sbjct: 1   MAMELELDDDVFFADISKQISLLIMDEDEHLNP---VSLSSSSSSLSFQGLFRGGYQTAP 60

Query: 61  VAY-SSVSKGTGVFIPRSLQPARK----QRRGRNNNMKPNRQFQINIDVNSQASSNNH 114
             Y    SKGTGVFIP+S QP R+    Q++GR ++   N + Q ++  N Q    NH
Sbjct: 61  YMYQQEQSKGTGVFIPKSSQPRRRPHHHQKQGRYSSF--NAKQQHSLHQNRQEYQQNH 113

BLAST of CmaCh14G016850 vs. TAIR10
Match: AT3G06070.1 (AT3G06070.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEE-PLP-HPHVSLQALSHGGHH--PTQLLAGH 60
           M + LE +DD+FFAD+S+QL+LL+ D++E+ P+     VS Q L  G +    T  +  +
Sbjct: 1   MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYN 60

Query: 61  EHATVAYSSVSKGTGVFIPRSLQPARK-------QRRGR-NNNMKPNRQFQINIDVNSQA 114
           E         SKGTGVFIPRS QP RK       +++GR   +  P +QF  +   N+  
Sbjct: 61  EQINYNVIRESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFIGSFIPKQQFPHHGHDNNLT 120

BLAST of CmaCh14G016850 vs. NCBI nr
Match: gi|659076489|ref|XP_008438708.1| (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-48
Identity = 103/124 (83.06%), Postives = 110/124 (88.71%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPHPHVSLQALSHGGHHPTQLLAGHEHAT 60
           MEVALE EDDLFFADLSRQLSLLLMDDNE+PLP PHVSLQALSHG H+PT+ LA HEHA 
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPRPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  VA----YSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLMR 120
            A    Y+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ SSNNHLMR
Sbjct: 61  AAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLMR 120

BLAST of CmaCh14G016850 vs. NCBI nr
Match: gi|449432722|ref|XP_004134148.1| (PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-47
Identity = 102/125 (81.60%), Postives = 109/125 (87.20%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPHPHVSLQALSHGGHHPTQLLAGHEHA- 60
           MEVALE EDDLFFADLSRQLSLLLMDDNE+PLPHPHVSLQALSHG H+PT+ LA HEHA 
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  ----TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLM 120
                 AY+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ  SNNH M
Sbjct: 61  AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120

BLAST of CmaCh14G016850 vs. NCBI nr
Match: gi|802580341|ref|XP_012069551.1| (PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas])

HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLP-HPHVSLQALSHGGHHPTQLLAGHEHA 60
           MEVA+EFEDDL FADLS+Q+SLL+MDD+E+P+  +P VS Q  S G        A     
Sbjct: 1   MEVAMEFEDDLLFADLSKQISLLIMDDDEDPVANYPSVSFQDFSRG-----NCPAAASSF 60

Query: 61  TVAYSSVSKGTGVFIPRSLQPARKQRRGRN---NNMKPNRQFQINIDVNSQASSNNHLMR 120
                  SKGTGVFIPRS QP RK R+GR+   N+ K NR  Q N  + SQ S +N L  
Sbjct: 61  VCEQRRESKGTGVFIPRSSQPRRKDRQGRHSSFNSSKSNRLHQDNTRMVSQVSYSNSLY- 118

BLAST of CmaCh14G016850 vs. NCBI nr
Match: gi|734415172|gb|KHN37584.1| (hypothetical protein glysoja_007287 [Glycine soja])

HSP 1 Score: 92.0 bits (227), Expect = 7.4e-16
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 1

Query: 1  MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPH-PHVSLQALSHGGHHPTQLLAGHEHA 60
          MEVA+E EDDLFFADLS++++LL+MD++E+PL   P  SLQA S   H P Q    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNN 92
            A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 --ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of CmaCh14G016850 vs. NCBI nr
Match: gi|734404540|gb|KHN33051.1| (hypothetical protein glysoja_010042 [Glycine soja])

HSP 1 Score: 91.7 bits (226), Expect = 9.6e-16
Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = 1

Query: 1   MEVALEFEDDLFFADLSRQLSLLLMDDNEEPLPH-PHVSLQALSHGGHHPTQLLAGHEHA 60
           MEVA+E EDDLFFADLS++++LL+MD++E+PL   P  SLQA S   H P Q    +EH 
Sbjct: 1   MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61  TVAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQ 100
             A    SKGTGVFIP++ QP RKQR+GR NN     Q Q
Sbjct: 61  --ALRRESKGTGVFIPQATQPRRKQRKGRANNSYAKHQKQ 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAE7_CUCSA1.5e-4781.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1[more]
A0A067KYS4_JATCU6.1e-1751.61Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1[more]
A0A0B2RZE0_GLYSO5.1e-1657.61Uncharacterized protein OS=Glycine soja GN=glysoja_007287 PE=4 SV=1[more]
K7M0W4_SOYBN5.1e-1657.61Uncharacterized protein OS=Glycine max GN=GLYMA_13G207100 PE=4 SV=1[more]
A0A0B2RET3_GLYSO6.7e-1655.00Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19190.14.4e-1139.83 unknown protein[more]
AT3G06070.13.2e-0937.60 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659076489|ref|XP_008438708.1|7.3e-4883.06PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo][more]
gi|449432722|ref|XP_004134148.1|2.1e-4781.60PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus][more]
gi|802580341|ref|XP_012069551.1|8.7e-1751.61PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas][more]
gi|734415172|gb|KHN37584.1|7.4e-1657.61hypothetical protein glysoja_007287 [Glycine soja][more]
gi|734404540|gb|KHN33051.1|9.6e-1655.00hypothetical protein glysoja_010042 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G016850.1CmaCh14G016850.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34956FAMILY NOT NAMEDcoord: 1..120
score: 5.5
NoneNo IPR availablePANTHERPTHR34956:SF2SUBFAMILY NOT NAMEDcoord: 1..120
score: 5.5

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh14G016850CmaCh06G014280Cucurbita maxima (Rimu)cmacmaB284