CmaCh06G014280 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G014280
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_3
LocationCma_Chr06 : 9183978 .. 9184445 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCCCATGTTTCTCTTCAGGTACTTCCTTTTTCCAAATTTCATTCATTTGGGTTGCTTTTTTAGTCTCTCTGTTTGTGGCTGTGAATTCAAACAAGCTCGATCAATCTGCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGCTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAACCGACAGTTTCCAATCACTGTTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAA

mRNA sequence

ATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCCCATGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGCTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAACCGACAGTTTCCAATCACTGTTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAA

Coding sequence (CDS)

ATGGAAGTAGCTTTGGAACTTGAAGATGATTTGTTCTTCGCTGATTTAAGCAGACAGCTCTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCATCCCCATGTTTCTCTTCAGGCTCTCGCTCATGGAGGCCACCAGCCTGCACGGCCACTGGCGGTGCATGACCAAGCTGCCGCTGCTATTGTCGCTGCCTACAGTGGCGTAAGCAAAGGCACCGGCGTGTTCATCCCTCGGTCTTTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGATACAATAACATAAAGGCAAACCGACAGTTTCCAATCACTGTTGATGTGAATTCACAAGTATCCAACAACAATTCGTTGCGTCCCAAAAAGGGTTAA

Protein sequence

MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVDVNSQVSNNNSLRPKKG
BLAST of CmaCh06G014280 vs. TrEMBL
Match: A0A0A0LAE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.0e-48
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH PHVSLQAL+HG H P RPLA H+ A
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60

Query: 61  AAAIVAA-YSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVDVNSQV-SNNNS 120
           AAA VAA Y+GVSKGTGVFIPRSLQPARKQRRGR+NNIK NRQF I++DVNSQV SNN+S
Sbjct: 61  AAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHS 120

Query: 121 LRPKKG 125
           +RPKKG
Sbjct: 121 MRPKKG 125

BLAST of CmaCh06G014280 vs. TrEMBL
Match: A0A067KYS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-20
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+E EDDL FADLS+Q+SLL+MDD+EDP+ ++P VS Q  +  G+ PA        A
Sbjct: 1   MEVAMEFEDDLLFADLSKQISLLIMDDDEDPVANYPSVSFQDFSR-GNCPA--------A 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGR---YNNIKANRQFPITVDVNSQVSNNN 120
           A++ V      SKGTGVFIPRS QP RK R+GR   +N+ K+NR       + SQVS +N
Sbjct: 61  ASSFVCEQRRESKGTGVFIPRSSQPRRKDRQGRHSSFNSSKSNRLHQDNTRMVSQVSYSN 118

Query: 121 SLRPKKG 125
           SL PKKG
Sbjct: 121 SLYPKKG 118

BLAST of CmaCh06G014280 vs. TrEMBL
Match: D7T6S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02830 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 66/125 (52.80%), Postives = 80/125 (64.00%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+E+EDDLFF DLS+Q+SLL+MDD+EDP+   P VSLQA +   H   +   +HDQ 
Sbjct: 1   MEVAMEIEDDLFFQDLSKQISLLIMDDDEDPVARCPSVSLQAFSRVIHPSTQYPILHDQN 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYN--NIKANRQFPITVDVNSQVSNNNS 120
                      SKGTGVFIPRS QP RK R+GR+N  N K+ RQ   T  V S +S  NS
Sbjct: 61  CRR-------ESKGTGVFIPRSSQPRRKNRQGRFNSSNTKSQRQPDNTRGV-SHLSYKNS 117

Query: 121 LRPKK 124
             PKK
Sbjct: 121 FNPKK 117

BLAST of CmaCh06G014280 vs. TrEMBL
Match: A0A0B2RET3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-17
Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA +   H P +   +++ A
Sbjct: 1   MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEHA 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPI-TVDVNSQVSNNNSL 120
                      SKGTGVFIP++ QP RKQR+GR NN  A  Q       + SQV N NS 
Sbjct: 61  LRR-------ESKGTGVFIPQATQPRRKQRKGRANNSYAKHQKQSQDTRMVSQVPNKNSF 118

Query: 121 RPKKG 125
           + + G
Sbjct: 121 KSRNG 118

BLAST of CmaCh06G014280 vs. TrEMBL
Match: C6T2T0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G105500 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17
Identity = 62/125 (49.60%), Postives = 77/125 (61.60%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA +   H P        Q 
Sbjct: 1   MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPP-------PQF 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPI-TVDVNSQVSNNNSL 120
           A     A    SKGTGVFIP++ QP RKQR+GR NN  A  Q       + SQV N NS 
Sbjct: 61  AFIFEHALRRESKGTGVFIPQATQPRRKQRKGRANNSYAKHQKQSQDTRMVSQVPNKNSF 118

Query: 121 RPKKG 125
           + + G
Sbjct: 121 KSRNG 118

BLAST of CmaCh06G014280 vs. TAIR10
Match: AT5G19190.1 (AT5G19190.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-----HHPHVSLQALAHGGHQPARPLA 60
           M + LEL+DD+FFAD+S+Q+SLL+MD++E   P         +S Q L  GG+Q A  + 
Sbjct: 1   MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRGGYQTAPYMY 60

Query: 61  VHDQAAAAIVAAYSGVSKGTGVFIPRSLQPARK----QRRGRYNNIKANRQFPITVDVNS 120
             +Q            SKGTGVFIP+S QP R+    Q++GRY++  A +Q  +  +   
Sbjct: 61  QQEQ------------SKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQHSLHQNRQE 117

BLAST of CmaCh06G014280 vs. TAIR10
Match: AT3G06070.1 (AT3G06070.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-11
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMD-DNEDPLPHHPHVSLQALAHGGHQ-PARPLAVHD 60
           M + LEL+DD+FFAD+S+QL+LL+ D D ++P+     VS Q L  G +Q  A P  +++
Sbjct: 1   MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYN 60

Query: 61  QAAAAIVAAYSGVSKGTGVFIPRSLQPARK-------QRRGRY-NNIKANRQFPITVDVN 119
           +     V      SKGTGVFIPRS QP RK       +++GR+  +    +QFP     N
Sbjct: 61  EQINYNVIR---ESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFIGSFIPKQQFPHHGHDN 120

BLAST of CmaCh06G014280 vs. NCBI nr
Match: gi|659076489|ref|XP_008438708.1| (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-48
Identity = 105/125 (84.00%), Postives = 113/125 (90.40%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP  PHVSLQAL+HG H P RPLA H+ A
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPR-PHVSLQALSHGVHYPTRPLATHEHA 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVDVNSQVSNNNSL- 120
           AAA+ AAY+GVSKGTGVFIPRSLQPARKQRRGR+NNIK NRQF I++DVNSQVS+NN L 
Sbjct: 61  AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLM 120

Query: 121 RPKKG 125
           RPKKG
Sbjct: 121 RPKKG 124

BLAST of CmaCh06G014280 vs. NCBI nr
Match: gi|449432722|ref|XP_004134148.1| (PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH PHVSLQAL+HG H P RPLA H+ A
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60

Query: 61  AAAIVAA-YSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVDVNSQV-SNNNS 120
           AAA VAA Y+GVSKGTGVFIPRSLQPARKQRRGR+NNIK NRQF I++DVNSQV SNN+S
Sbjct: 61  AAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHS 120

Query: 121 LRPKKG 125
           +RPKKG
Sbjct: 121 MRPKKG 125

BLAST of CmaCh06G014280 vs. NCBI nr
Match: gi|1000970935|ref|XP_002517185.2| (PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis])

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1

Query: 5   LELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQAAAAI 64
           +ELEDDLFFADL++Q+SLL+MDD+EDP+  +P V+ Q  + G H  A     ++Q     
Sbjct: 1   MELEDDLFFADLNKQISLLIMDDDEDPVASYPSVAFQNFSRGNHPTAPSSYTYEQTCRR- 60

Query: 65  VAAYSGVSKGTGVFIPRSLQPARKQRRGRYN--NIKANRQFPITVDVNSQVSNNNSLRPK 124
                  SKGTGVFIPRS QP RK R+GR++  N K NRQ   T  V+ QVS+NNSL PK
Sbjct: 61  ------ESKGTGVFIPRSSQPRRKHRQGRHSSFNSKTNRQHDSTRMVSHQVSHNNSLYPK 114

BLAST of CmaCh06G014280 vs. NCBI nr
Match: gi|802580341|ref|XP_012069551.1| (PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas])

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-20
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+E EDDL FADLS+Q+SLL+MDD+EDP+ ++P VS Q  +  G+ PA        A
Sbjct: 1   MEVAMEFEDDLLFADLSKQISLLIMDDDEDPVANYPSVSFQDFSR-GNCPA--------A 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGR---YNNIKANRQFPITVDVNSQVSNNN 120
           A++ V      SKGTGVFIPRS QP RK R+GR   +N+ K+NR       + SQVS +N
Sbjct: 61  ASSFVCEQRRESKGTGVFIPRSSQPRRKDRQGRHSSFNSSKSNRLHQDNTRMVSQVSYSN 118

Query: 121 SLRPKKG 125
           SL PKKG
Sbjct: 121 SLYPKKG 118

BLAST of CmaCh06G014280 vs. NCBI nr
Match: gi|1009141133|ref|XP_015888028.1| (PREDICTED: uncharacterized protein LOC107423031 [Ziziphus jujuba])

HSP 1 Score: 105.5 bits (262), Expect = 6.7e-20
Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQA 60
           MEVA+E+EDD FFADLS+Q+SLL+MDD EDPL + P VSLQA +H  H P +   +++Q 
Sbjct: 1   MEVAMEVEDDSFFADLSKQISLLIMDDEEDPLANCPSVSLQAFSHATHPPVQSPFLYEQV 60

Query: 61  AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYN--NIKANRQFPITVDVNSQVSNNNS 120
                      SKGTGVFIP+S QP RK R+GR+   N K+ RQ P    + SQ+ ++ S
Sbjct: 61  CRR-------ESKGTGVFIPQSSQPRRKNRQGRFTSYNTKSQRQ-PENNKIASQLPSSAS 118

Query: 121 LRPKKG 125
            +PK G
Sbjct: 121 FKPKYG 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAE7_CUCSA9.0e-4884.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1[more]
A0A067KYS4_JATCU2.1e-2052.76Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1[more]
D7T6S8_VITVI1.4e-1952.80Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02830 PE=4 SV=... [more]
A0A0B2RET3_GLYSO1.3e-1748.00Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1[more]
C6T2T0_SOYBN2.2e-1749.60Uncharacterized protein OS=Glycine max GN=GLYMA_15G105500 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19190.14.9e-1337.21 unknown protein[more]
AT3G06070.14.6e-1139.06 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659076489|ref|XP_008438708.1|9.9e-4884.00PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo][more]
gi|449432722|ref|XP_004134148.1|1.3e-4784.92PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus][more]
gi|1000970935|ref|XP_002517185.2|1.8e-2052.07PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis][more]
gi|802580341|ref|XP_012069551.1|3.0e-2052.76PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas][more]
gi|1009141133|ref|XP_015888028.1|6.7e-2050.00PREDICTED: uncharacterized protein LOC107423031 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G014280.1CmaCh06G014280.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34956FAMILY NOT NAMEDcoord: 1..124
score: 2.0
NoneNo IPR availablePANTHERPTHR34956:SF2SUBFAMILY NOT NAMEDcoord: 1..124
score: 2.0

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G014280CmaCh14G016850Cucurbita maxima (Rimu)cmacmaB284