ClCG05G005340 (gene) Watermelon (Charleston Gray)

NameClCG05G005340
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 5218097 .. 5218769 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAGTAATTCTCTCTTTAGTTCTTTTGCCACAGACACCCACCCAGCAAGCTAACTCTCTCTTCTTGCAGTTCTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGTACTTCCTTTTTCATCCCAAACACGAACATAGCTCAACGTTAAGACATTATTACATTCTAGGTTGTAGGTTCAAATCTCCGCCATCTGGTGGGTTATAATATTTCAATTTTTCAATCACTTTGGTATTGTCCAATTTTCAAGATCAATAAGTTCTTTAAATCTCTCTTTTGTGTCTATGAATTCAAACAAGATTGATCAATTTGCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG

mRNA sequence

AAAAAAAAAAAAGTAATTCTCTCTTTAGTTCTTTTGCCACAGACACCCACCCAGCAAGCTAACTCTCTCTTCTTGCAGTTCTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG

Coding sequence (CDS)

ATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG

Protein sequence

MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHATAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSIRPKK
BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0A0LAE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 5.9e-60
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEH-A 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEH A
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSI 120
            A VAAAY+GVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQV SNNHS+
Sbjct: 61  AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120

Query: 121 RPKK 124
           RPKK
Sbjct: 121 RPKK 124

BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0B2RET3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1

Query: 1  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60
          MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA S  +H P +    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNN 96
                A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 ------ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of ClCG05G005340 vs. TrEMBL
Match: K7M0W4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G207100 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1

Query: 1  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60
          MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA S  +H P +    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNN 96
                A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 ------ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0B2RZE0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007287 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1

Query: 1  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60
          MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA S  +H P +    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNN 96
                A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 ------ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A067KYS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.4e-18
Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-HPHVSLQALSHGVHYPTRPLATHEHA 60
           MEVA+E EDDL FADLS+Q+SLL+MDD+EDP+  +P VS Q  S G + P         A
Sbjct: 1   MEVAMEFEDDLLFADLSKQISLLIMDDDEDPVANYPSVSFQDFSRG-NCPA--------A 60

Query: 61  TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRH---NNIKPNRQFHISIDVNSQVSSNN 120
            +         SKGTGVFIPRS QP RK R+GRH   N+ K NR    +  + SQVS +N
Sbjct: 61  ASSFVCEQRRESKGTGVFIPRSSQPRRKDRQGRHSSFNSSKSNRLHQDNTRMVSQVSYSN 117

Query: 121 HSIRPKK 124
            S+ PKK
Sbjct: 121 -SLYPKK 117

BLAST of ClCG05G005340 vs. TAIR10
Match: AT5G19190.1 (AT5G19190.1 unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 48/127 (37.80%), Postives = 66/127 (51.97%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP------HPHVSLQALSHGVHYPTRPLA 60
           M + LEL+DD+FFAD+S+Q+SLL+MD++E   P         +S Q L  G  Y T P  
Sbjct: 1   MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRG-GYQTAPYM 60

Query: 61  THEHATAVVAAAYSGVSKGTGVFIPRSLQPARK----QRRGRHNNIKPNRQFHISIDVNS 118
             +             SKGTGVFIP+S QP R+    Q++GR+++    +Q   S+  N 
Sbjct: 61  YQQEQ-----------SKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQH--SLHQNR 113

BLAST of ClCG05G005340 vs. TAIR10
Match: AT3G06070.1 (AT3G06070.1 unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10
Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMD-DNEDPLP-HPHVSLQALSHGVHYPTRPLATHEH 60
           M + LEL+DD+FFAD+S+QL+LL+ D D ++P+     VS Q L  G +Y T       +
Sbjct: 1   MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRG-NYQTSATPYMMY 60

Query: 61  ATAVVAAAYSGV--SKGTGVFIPRSLQPARKQRRGRH--------NNIKPNRQF-HISID 118
              +    Y+ +  SKGTGVFIPRS QP RK     H         +  P +QF H   D
Sbjct: 61  NEQI---NYNVIRESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFIGSFIPKQQFPHHGHD 120

BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|659076489|ref|XP_008438708.1| (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 3.8e-60
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAT 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP PHVSLQALSHGVHYPTRPLATHEHA 
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPRPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  AVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSIR 120
           A VAAAY+GVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNH +R
Sbjct: 61  AAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLMR 120

Query: 121 PKK 124
           PKK
Sbjct: 121 PKK 123

BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|449432722|ref|XP_004134148.1| (PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 8.5e-60
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1

Query: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEH-A 60
           MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEH A
Sbjct: 1   MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60

Query: 61  TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSI 120
            A VAAAY+GVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQV SNNHS+
Sbjct: 61  AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120

Query: 121 RPKK 124
           RPKK
Sbjct: 121 RPKK 124

BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|1000970935|ref|XP_002517185.2| (PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis])

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19
Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 1

Query: 5   LELEDDLFFADLSRQLSLLLMDDNEDPL-PHPHVSLQALSHGVHYPTRPLATHEHATAVV 64
           +ELEDDLFFADL++Q+SLL+MDD+EDP+  +P V+ Q  S G H PT P +     T   
Sbjct: 1   MELEDDLFFADLNKQISLLIMDDDEDPVASYPSVAFQNFSRGNH-PTAPSSYTYEQTC-- 60

Query: 65  AAAYSGVSKGTGVFIPRSLQPARKQRRGRHN--NIKPNRQFHISIDVNSQVSSNNHSIRP 124
                  SKGTGVFIPRS QP RK R+GRH+  N K NRQ   +  V+ QVS NN S+ P
Sbjct: 61  ----RRESKGTGVFIPRSSQPRRKHRQGRHSSFNSKTNRQHDSTRMVSHQVSHNN-SLYP 114

BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|734404540|gb|KHN33051.1| (hypothetical protein glysoja_010042 [Glycine soja])

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-18
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1

Query: 1  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60
          MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA S  +H P +    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNN 96
                A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 ------ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|734415172|gb|KHN37584.1| (hypothetical protein glysoja_007287 [Glycine soja])

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-18
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1

Query: 1  MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPH-PHVSLQALSHGVHYPTRPLATHEHA 60
          MEVA+ELEDDLFFADLS++++LL+MD++EDPL   P  SLQA S  +H P +    +EH 
Sbjct: 1  MEVAMELEDDLFFADLSKEIALLIMDEDEDPLASCPPDSLQAFSGAIHPPPQFAFIYEH- 60

Query: 61 TAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNN 96
                A    SKGTGVFIP++ QP RKQR+GR NN
Sbjct: 61 ------ALRRESKGTGVFIPQATQPRRKQRKGRANN 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAE7_CUCSA5.9e-6095.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1[more]
A0A0B2RET3_GLYSO5.6e-1856.25Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1[more]
K7M0W4_SOYBN5.6e-1856.25Uncharacterized protein OS=Glycine max GN=GLYMA_13G207100 PE=4 SV=1[more]
A0A0B2RZE0_GLYSO5.6e-1856.25Uncharacterized protein OS=Glycine soja GN=glysoja_007287 PE=4 SV=1[more]
A0A067KYS4_JATCU7.4e-1850.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19190.11.4e-1237.80 unknown protein[more]
AT3G06070.11.0e-1038.46 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659076489|ref|XP_008438708.1|3.8e-6095.12PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo][more]
gi|449432722|ref|XP_004134148.1|8.5e-6095.16PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus][more]
gi|1000970935|ref|XP_002517185.2|1.9e-1953.28PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis][more]
gi|734404540|gb|KHN33051.1|8.1e-1856.25hypothetical protein glysoja_010042 [Glycine soja][more]
gi|734415172|gb|KHN37584.1|8.1e-1856.25hypothetical protein glysoja_007287 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045116 protein neddylation
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016881 acid-amino acid ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019781 NEDD8 activating enzyme activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G005340.1ClCG05G005340.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34956FAMILY NOT NAMEDcoord: 1..122
score: 2.6
NoneNo IPR availablePANTHERPTHR34956:SF2SUBFAMILY NOT NAMEDcoord: 1..122
score: 2.6

The following gene(s) are paralogous to this gene:

None