ClCG05G005340 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAGTAATTCTCTCTTTAGTTCTTTTGCCACAGACACCCACCCAGCAAGCTAACTCTCTCTTCTTGCAGTTCTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGTACTTCCTTTTTCATCCCAAACACGAACATAGCTCAACGTTAAGACATTATTACATTCTAGGTTGTAGGTTCAAATCTCCGCCATCTGGTGGGTTATAATATTTCAATTTTTCAATCACTTTGGTATTGTCCAATTTTCAAGATCAATAAGTTCTTTAAATCTCTCTTTTGTGTCTATGAATTCAAACAAGATTGATCAATTTGCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG AAAAAAAAAAAAGTAATTCTCTCTTTAGTTCTTTTGCCACAGACACCCACCCAGCAAGCTAACTCTCTCTTCTTGCAGTTCTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG ATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGTGGTGGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGCGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAATATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATCCGTCCTAAAAAG MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHATAVVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSIRPKK
BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0A0LAE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149910 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 5.9e-60 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0B2RET3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_010042 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of ClCG05G005340 vs. TrEMBL
Match: K7M0W4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G207100 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A0B2RZE0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007287 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-18 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of ClCG05G005340 vs. TrEMBL
Match: A0A067KYS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02121 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 7.4e-18 Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 1
BLAST of ClCG05G005340 vs. TAIR10
Match: AT5G19190.1 (AT5G19190.1 unknown protein) HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12 Identity = 48/127 (37.80%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of ClCG05G005340 vs. TAIR10
Match: AT3G06070.1 (AT3G06070.1 unknown protein) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 1
BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|659076489|ref|XP_008438708.1| (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 3.8e-60 Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 1
BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|449432722|ref|XP_004134148.1| (PREDICTED: uncharacterized protein LOC101209089 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 8.5e-60 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|1000970935|ref|XP_002517185.2| (PREDICTED: uncharacterized protein LOC8271592 [Ricinus communis]) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19 Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 1
BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|734404540|gb|KHN33051.1| (hypothetical protein glysoja_010042 [Glycine soja]) HSP 1 Score: 98.6 bits (244), Expect = 8.1e-18 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of ClCG05G005340 vs. NCBI nr
Match: gi|734415172|gb|KHN37584.1| (hypothetical protein glysoja_007287 [Glycine soja]) HSP 1 Score: 98.6 bits (244), Expect = 8.1e-18 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|