CmaCh13G010690 (gene) Cucurbita maxima (Rimu)

NameCmaCh13G010690
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTCP family transcription factor
LocationCma_Chr13 : 8093105 .. 8093779 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGGAGAGTAAATAATATGATCTCAAAATTGAAGCAAGAGGGCGTTCATGTTGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGGGCCTTCAAGGCAAGGGCCATTTCTTAGAGGCAATCCAAGAATTTTTAGAGTTTCTCCTTTGTTTGGAGGAAAAGACAGGCACAGCAAAGTTTGCACAATGAAGGGCTTAAGAGACAGAAGGATTAGGCTTTCAGCTCCCACTGCTATTCAACTTTATGATTTGCAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATAGACTGGCTGATGGATGTCACAAGATTTGATATTGATAAGCTCCCACCACTCCATTTTCCGAAAGATTTTGACCCAAATGCCTCGTTTCTTCATCATTTTGATATTGCAGATGCTGCAGCGAAGGCCAAACATGAAGAAACTGGGATGCTTTTGCTTCAGAAGTCGTCTCCTTCACCCAACCATGCTTCTTTTTCTGCTCTTCAGCTTCAAACCAACGCCATGACTGAAAACTGTTGCCATTTTGACCCTCCAAGCTTTCCATTCCCATTAATGGATCAGGCCAATCCAGCTTCATTTTCCTCACCTTCTGAGCAGTTGCTGTTCCGTCCATTGACGATGCCACCCGAAGTTTCTTCTTACCTTCCTAACGGTGGAAATTAA

mRNA sequence

ATGACAGGGAGAGTAAATAATATGATCTCAAAATTGAAGCAAGAGGGCGTTCATGTTGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGGGCCTTCAAGGCAAGGGCCATTTCTTAGAGGCAATCCAAGAATTTTTAGAGTTTCTCCTTTGTTTGGAGGAAAAGACAGGCACAGCAAAGTTTGCACAATGAAGGGCTTAAGAGACAGAAGGATTAGGCTTTCAGCTCCCACTGCTATTCAACTTTATGATTTGCAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATAGACTGGCTGATGGATGTCACAAGATTTGATATTGATAAGCTCCCACCACTCCATTTTCCGAAAGATTTTGACCCAAATGCCTCGTTTCTTCATCATTTTGATATTGCAGATGCTGCAGCGAAGGCCAAACATGAAGAAACTGGGATGCTTTTGCTTCAGAAGTCGTCTCCTTCACCCAACCATGCTTCTTTTTCTGCTCTTCAGCTTCAAACCAACGCCATGACTGAAAACTGTTGCCATTTTGACCCTCCAAGCTTTCCATTCCCATTAATGGATCAGGCCAATCCAGCTTCATTTTCCTCACCTTCTGAGCAGTTGCTGTTCCGTCCATTGACGATGCCACCCGAAGTTTCTTCTTACCTTCCTAACGGTGGAAATTAA

Coding sequence (CDS)

ATGACAGGGAGAGTAAATAATATGATCTCAAAATTGAAGCAAGAGGGCGTTCATGTTGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGGGCCTTCAAGGCAAGGGCCATTTCTTAGAGGCAATCCAAGAATTTTTAGAGTTTCTCCTTTGTTTGGAGGAAAAGACAGGCACAGCAAAGTTTGCACAATGAAGGGCTTAAGAGACAGAAGGATTAGGCTTTCAGCTCCCACTGCTATTCAACTTTATGATTTGCAAAACAGACTTGGCCTCAGCCAACCCAGCAAAGTCATAGACTGGCTGATGGATGTCACAAGATTTGATATTGATAAGCTCCCACCACTCCATTTTCCGAAAGATTTTGACCCAAATGCCTCGTTTCTTCATCATTTTGATATTGCAGATGCTGCAGCGAAGGCCAAACATGAAGAAACTGGGATGCTTTTGCTTCAGAAGTCGTCTCCTTCACCCAACCATGCTTCTTTTTCTGCTCTTCAGCTTCAAACCAACGCCATGACTGAAAACTGTTGCCATTTTGACCCTCCAAGCTTTCCATTCCCATTAATGGATCAGGCCAATCCAGCTTCATTTTCCTCACCTTCTGAGCAGTTGCTGTTCCGTCCATTGACGATGCCACCCGAAGTTTCTTCTTACCTTCCTAACGGTGGAAATTAA

Protein sequence

MTGRVNNMISKLKQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLHHFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYLPNGGN
BLAST of CmaCh13G010690 vs. Swiss-Prot
Match: TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 1

Query: 33  SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLS 92
           SRQ      NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQLYDLQ+RLGLS
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 93  QPSKVIDWLMDVTRFDIDKLPPLHFPKDFD---PNASF 128
           QPSKVIDWL++  + D+DKLPPL FP  F+   PN  F
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF 139

BLAST of CmaCh13G010690 vs. Swiss-Prot
Match: TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 1

Query: 42  NPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWL 101
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS  TAIQ+YDLQ RLGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 102 MDVTRFDIDKLPPLHFPKDF---DPNASFL 129
           ++V + D+D LPPL FP  F   +PN + L
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGL 110

BLAST of CmaCh13G010690 vs. Swiss-Prot
Match: TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-27
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 1

Query: 11  KLKQEGVHVEAKQMEGKR--KKGP----SRQGPFLRG-NPRIFRVSPLFGGKDRHSKVCT 70
           ++K++    E +   GK   KK P    S    +++  +PRI RVS  FGGKDRHSKVCT
Sbjct: 24  EVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 83

Query: 71  MKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHF-PKDFD 130
           ++GLRDRR+RLS PTAIQLYDLQ RLG+ QPSK +DWL+D  + +ID+LPPL   P++F 
Sbjct: 84  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF- 143

BLAST of CmaCh13G010690 vs. Swiss-Prot
Match: TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-19
Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 44  RIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMD 103
           RI RVS   GGKDRHSKV T KG RDRR+RLS  TA+Q YDLQ+RLG  QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 104 VTRFDIDKLPPL---HFPKD 121
                I +LP L   HFP D
Sbjct: 92  AAEDSISELPSLNNTHFPTD 111

BLAST of CmaCh13G010690 vs. Swiss-Prot
Match: TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.8e-19
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 1

Query: 44  RIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMD 103
           RI RVS   GGKDRHSKV T KGLRDRRIRLS  TAIQ YDLQ+RLG  QPSK ++WL++
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 104 VTRFDIDKLPPLH 117
                I  LP L+
Sbjct: 100 AASDSITDLPLLN 112

BLAST of CmaCh13G010690 vs. TrEMBL
Match: A0A0A0LTI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039270 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.0e-67
Identity = 138/194 (71.13%), Postives = 149/194 (76.80%), Query Frame = 1

Query: 8   MISKLKQEGVHVEAKQMEGKRKKGP--SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67
           MISKLK+EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNA 127
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120

Query: 128 SFLHHFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFP 187
           S LHH DI DAA KAK+EET   LL                +QTN +   C HF+PP+FP
Sbjct: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178

Query: 188 FPLM-DQANPASFS 199
           FP M DQ N A FS
Sbjct: 181 FPFMDDQTNSAPFS 178

BLAST of CmaCh13G010690 vs. TrEMBL
Match: A0A0K9RR59_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038230 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-32
Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 1

Query: 12  LKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRD 71
           L ++G     KQ EG   K   PSRQ      NPRI RVS  FGGKDRHSKVCT+KGLRD
Sbjct: 4   LNKDGPPYTTKQEEGDSSKAAAPSRQWSSGFKNPRIVRVSRTFGGKDRHSKVCTIKGLRD 63

Query: 72  RRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPL-HFPKDFDPNASF 128
           RRIRLS PTAIQLYDLQ+RLGLSQPSKVIDWL+D T+ DIDKLPPL   P  F+P+  +
Sbjct: 64  RRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDTTKLDIDKLPPLPPIPGGFNPSQGY 122

BLAST of CmaCh13G010690 vs. TrEMBL
Match: I1KD23_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G204300 PE=4 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 1

Query: 13  KQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRI 72
           KQEG          K     SRQ    R NPRI RVS  FGGKDRHSKVCT++GLRDRRI
Sbjct: 16  KQEGDTTTNIDKFSKASSTTSRQWSAFR-NPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 75

Query: 73  RLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLHH 131
           RLS PTAIQLYDLQ++LGLSQPSKVIDWL++ T+FDIDKLPPL FP+ F     F HH
Sbjct: 76  RLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGF---GQFHHH 129

BLAST of CmaCh13G010690 vs. TrEMBL
Match: A0A0B2QE85_GLYSO (Transcription factor TCP5 OS=Glycine soja GN=glysoja_032385 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = 1

Query: 13  KQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRI 72
           KQEG          K     SRQ    R NPRI RVS  FGGKDRHSKVCT++GLRDRRI
Sbjct: 16  KQEGDTTTNIDKFSKASSTTSRQWSAFR-NPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 75

Query: 73  RLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLHH 131
           RLS PTAIQLYDLQ++LGLSQPSKVIDWL++ T+FDIDKLPPL FP+ F     F HH
Sbjct: 76  RLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGF---GQFHHH 129

BLAST of CmaCh13G010690 vs. TrEMBL
Match: A0A151S0B6_CAJCA (Transcription factor TCP5 OS=Cajanus cajan GN=KK1_030124 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.7e-31
Identity = 79/120 (65.83%), Postives = 88/120 (73.33%), Query Frame = 1

Query: 10  SKLKQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRD 69
           S+ KQEG     K    K     SRQ    R NPRI RVS  FGGKDRHSKVCT++GLRD
Sbjct: 11  SQAKQEGDTNSIKF--SKASSTTSRQWSAFR-NPRIVRVSRSFGGKDRHSKVCTIRGLRD 70

Query: 70  RRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLH 129
           RRIRLS PTAIQLYDLQ++LGLSQPSKVIDWL++ T+FDIDKLPPL FP+ F   A F H
Sbjct: 71  RRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGF---AQFHH 124

BLAST of CmaCh13G010690 vs. TAIR10
Match: AT5G60970.1 (AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 138.3 bits (347), Expect = 5.9e-33
Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 1

Query: 33  SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLS 92
           SRQ      NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQLYDLQ+RLGLS
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 93  QPSKVIDWLMDVTRFDIDKLPPLHFPKDFD---PNASF 128
           QPSKVIDWL++  + D+DKLPPL FP  F+   PN  F
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF 139

BLAST of CmaCh13G010690 vs. TAIR10
Match: AT5G08070.1 (AT5G08070.1 TCP domain protein 17)

HSP 1 Score: 131.0 bits (328), Expect = 9.4e-31
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 1

Query: 42  NPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWL 101
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS  TAIQ+YDLQ RLGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 102 MDVTRFDIDKLPPLHFPKDF---DPNASFL 129
           ++V + D+D LPPL FP  F   +PN + L
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGL 110

BLAST of CmaCh13G010690 vs. TAIR10
Match: AT3G02150.2 (AT3G02150.2 plastid transcription factor 1)

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-28
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 1

Query: 11  KLKQEGVHVEAKQMEGKR--KKGP----SRQGPFLRG-NPRIFRVSPLFGGKDRHSKVCT 70
           ++K++    E +   GK   KK P    S    +++  +PRI RVS  FGGKDRHSKVCT
Sbjct: 24  EVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 83

Query: 71  MKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHF-PKDFD 130
           ++GLRDRR+RLS PTAIQLYDLQ RLG+ QPSK +DWL+D  + +ID+LPPL   P++F 
Sbjct: 84  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF- 143

BLAST of CmaCh13G010690 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 44  RIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMD 103
           RI RVS   GGKDRHSKV T KG RDRR+RLS  TA+Q YDLQ+RLG  QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 104 VTRFDIDKLPPL---HFPKD 121
                I +LP L   HFP D
Sbjct: 92  AAEDSISELPSLNNTHFPTD 111

BLAST of CmaCh13G010690 vs. TAIR10
Match: AT1G30210.1 (AT1G30210.1 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 95.5 bits (236), Expect = 4.4e-20
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 1

Query: 44  RIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMD 103
           RI RVS   GGKDRHSKV T KGLRDRRIRLS  TAIQ YDLQ+RLG  QPSK ++WL++
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 104 VTRFDIDKLPPLH 117
                I  LP L+
Sbjct: 100 AASDSITDLPLLN 112

BLAST of CmaCh13G010690 vs. NCBI nr
Match: gi|659068735|ref|XP_008445912.1| (PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 5.9e-67
Identity = 138/195 (70.77%), Postives = 150/195 (76.92%), Query Frame = 1

Query: 8   MISKLKQEGVHVEAKQMEGKRKKGP--SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67
           MISKLK++G H EAKQMEGKRKK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 1   MISKLKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNA 127
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPLHFPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNA 120

Query: 128 SFLHHFDIADAAA--KAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPS 187
           S LHH DI   AA  KAK+EET   LL                +QTN +  +  HF+PPS
Sbjct: 121 SILHHSDIGGDAALMKAKNEETDQTLL----------------VQTNDINGDSSHFEPPS 179

Query: 188 FPFPLMDQANPASFS 199
           FPFP M Q N + FS
Sbjct: 181 FPFPFMYQTNSSPFS 179

BLAST of CmaCh13G010690 vs. NCBI nr
Match: gi|778664744|ref|XP_011660343.1| (PREDICTED: transcription factor TCP5 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-66
Identity = 138/194 (71.13%), Postives = 149/194 (76.80%), Query Frame = 1

Query: 8   MISKLKQEGVHVEAKQMEGKRKKGP--SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMK 67
           MISKLK+EG H EAKQ +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+K
Sbjct: 1   MISKLKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIK 60

Query: 68  GLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNA 127
           GLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNA
Sbjct: 61  GLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNA 120

Query: 128 SFLHHFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFP 187
           S LHH DI DAA KAK+EET   LL                +QTN +   C HF+PP+FP
Sbjct: 121 SILHHSDIGDAAFKAKNEETDHTLL----------------VQTNDINGVCSHFEPPTFP 178

Query: 188 FPLM-DQANPASFS 199
           FP M DQ N A FS
Sbjct: 181 FPFMDDQTNSAPFS 178

BLAST of CmaCh13G010690 vs. NCBI nr
Match: gi|698461316|ref|XP_009781748.1| (PREDICTED: transcription factor TCP5-like [Nicotiana sylvestris])

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 73/117 (62.39%), Postives = 88/117 (75.21%), Query Frame = 1

Query: 42  NPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWL 101
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQLYDLQ+RLGLSQPSKV+DWL
Sbjct: 40  NPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWL 99

Query: 102 MDVTRFDIDKLPPLHFPKDFDPNASFLHHFDIADAAAKAKHEETGMLLLQKSSPSPN 159
           ++VT+ +IDKLPPL  P  +       HHFD A+  AK+K  +T  +  +  S + N
Sbjct: 100 IEVTKHEIDKLPPLQIPPGYFAQFQGDHHFDAANLRAKSKVIDTDTVYGKNKSIASN 156

BLAST of CmaCh13G010690 vs. NCBI nr
Match: gi|697133600|ref|XP_009620849.1| (PREDICTED: transcription factor TCP5 [Nicotiana tomentosiformis])

HSP 1 Score: 146.4 bits (368), Expect = 6.2e-32
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 1

Query: 42  NPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWL 101
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS PTAIQLYDLQ+RLGLSQPSKV+DWL
Sbjct: 41  NPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWL 100

Query: 102 MDVTRFDIDKLPPLHFPKDFDPNASFLHHFDIADAAAKAKHEETGMLLLQKSSPSPN 159
           ++ T+ +IDKLPPL  P  +       HHFD A+  AK+K  +T  +  +  S + N
Sbjct: 101 IEATKHEIDKLPPLQIPPGYFAQFQGDHHFDAANLRAKSKVIDTDTVYGKNKSIASN 157

BLAST of CmaCh13G010690 vs. NCBI nr
Match: gi|902230684|gb|KNA21953.1| (hypothetical protein SOVF_038230 [Spinacia oleracea])

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 1

Query: 12  LKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRD 71
           L ++G     KQ EG   K   PSRQ      NPRI RVS  FGGKDRHSKVCT+KGLRD
Sbjct: 4   LNKDGPPYTTKQEEGDSSKAAAPSRQWSSGFKNPRIVRVSRTFGGKDRHSKVCTIKGLRD 63

Query: 72  RRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPL-HFPKDFDPNASF 128
           RRIRLS PTAIQLYDLQ+RLGLSQPSKVIDWL+D T+ DIDKLPPL   P  F+P+  +
Sbjct: 64  RRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDTTKLDIDKLPPLPPIPGGFNPSQGY 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TCP5_ARATH1.0e-3170.41Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1[more]
TCP17_ARATH1.7e-2971.11Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1[more]
TCP13_ARATH4.6e-2752.34Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1[more]
TCP2_ARATH2.7e-1960.00Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1[more]
TCP24_ARATH7.8e-1964.38Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LTI3_CUCSA7.0e-6771.13Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039270 PE=4 SV=1[more]
A0A0K9RR59_SPIOL7.3e-3265.55Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038230 PE=4 SV=1[more]
I1KD23_SOYBN1.2e-3165.25Uncharacterized protein OS=Glycine max GN=GLYMA_06G204300 PE=4 SV=2[more]
A0A0B2QE85_GLYSO1.2e-3165.25Transcription factor TCP5 OS=Glycine soja GN=glysoja_032385 PE=4 SV=1[more]
A0A151S0B6_CAJCA4.7e-3165.83Transcription factor TCP5 OS=Cajanus cajan GN=KK1_030124 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G60970.15.9e-3370.41 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5[more]
AT5G08070.19.4e-3171.11 TCP domain protein 17[more]
AT3G02150.22.6e-2852.34 plastid transcription factor 1[more]
AT4G18390.11.5e-2060.00 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
AT1G30210.14.4e-2064.38 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24[more]
Match NameE-valueIdentityDescription
gi|659068735|ref|XP_008445912.1|5.9e-6770.77PREDICTED: transcription factor TCP5 [Cucumis melo][more]
gi|778664744|ref|XP_011660343.1|1.0e-6671.13PREDICTED: transcription factor TCP5 [Cucumis sativus][more]
gi|698461316|ref|XP_009781748.1|2.1e-3262.39PREDICTED: transcription factor TCP5-like [Nicotiana sylvestris][more]
gi|697133600|ref|XP_009620849.1|6.2e-3261.54PREDICTED: transcription factor TCP5 [Nicotiana tomentosiformis][more]
gi|902230684|gb|KNA21953.1|1.0e-3165.55hypothetical protein SOVF_038230 [Spinacia oleracea][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G010690.1CmaCh13G010690.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 54..129
score: 8.4
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 54..112
score: 2
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 42..121
score: 5.6
NoneNo IPR availablePANTHERPTHR31072:SF24TRANSCRIPTION FACTOR TCP17-RELATEDcoord: 42..121
score: 5.6

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G010690Cucsa.113300Cucumber (Gy14) v1cgycmaB0264
CmaCh13G010690Cucsa.198300Cucumber (Gy14) v1cgycmaB0585
CmaCh13G010690Cla019050Watermelon (97103) v1cmawmB214
CmaCh13G010690Cla018555Watermelon (97103) v1cmawmB206
CmaCh13G010690Csa1G039270Cucumber (Chinese Long) v2cmacuB217
CmaCh13G010690Csa1G014310Cucumber (Chinese Long) v2cmacuB221
CmaCh13G010690MELO3C017230Melon (DHL92) v3.5.1cmameB207
CmaCh13G010690MELO3C002038Melon (DHL92) v3.5.1cmameB193
CmaCh13G010690ClCG06G015580Watermelon (Charleston Gray)cmawcgB208
CmaCh13G010690ClCG04G011720Watermelon (Charleston Gray)cmawcgB202
CmaCh13G010690CSPI01G06210Wild cucumber (PI 183967)cmacpiB218
CmaCh13G010690CSPI01G02940Wild cucumber (PI 183967)cmacpiB226
CmaCh13G010690CmoCh11G002140Cucurbita moschata (Rifu)cmacmoB215
CmaCh13G010690CmoCh01G004390Cucurbita moschata (Rifu)cmacmoB229
CmaCh13G010690CmoCh10G003140Cucurbita moschata (Rifu)cmacmoB209
CmaCh13G010690CmoCh13G011140Cucurbita moschata (Rifu)cmacmoB218
CmaCh13G010690Lsi07G009390Bottle gourd (USVL1VR-Ls)cmalsiB222
CmaCh13G010690Lsi06G014070Bottle gourd (USVL1VR-Ls)cmalsiB218
CmaCh13G010690Cp4.1LG18g07140Cucurbita pepo (Zucchini)cmacpeB229
CmaCh13G010690Cp4.1LG04g14610Cucurbita pepo (Zucchini)cmacpeB246
CmaCh13G010690MELO3C017230.2Melon (DHL92) v3.6.1cmamedB227
CmaCh13G010690MELO3C002038.2Melon (DHL92) v3.6.1cmamedB214
CmaCh13G010690MELO3C010371.2Melon (DHL92) v3.6.1cmamedB232
CmaCh13G010690CsaV3_1G002990Cucumber (Chinese Long) v3cmacucB0252
CmaCh13G010690CsaV3_4G010350Cucumber (Chinese Long) v3cmacucB0259
CmaCh13G010690CsaV3_1G006070Cucumber (Chinese Long) v3cmacucB0248
CmaCh13G010690Cla97C04G078570Watermelon (97103) v2cmawmbB233
CmaCh13G010690Cla97C06G125110Watermelon (97103) v2cmawmbB240
CmaCh13G010690Bhi02G000060Wax gourdcmawgoB0285
CmaCh13G010690Bhi08G000907Wax gourdcmawgoB0254
CmaCh13G010690CsGy4G009830Cucumber (Gy14) v2cgybcmaB483
CmaCh13G010690CsGy1G002960Cucumber (Gy14) v2cgybcmaB077
CmaCh13G010690CsGy1G005920Cucumber (Gy14) v2cgybcmaB073
CmaCh13G010690Carg17865Silver-seed gourdcarcmaB0645
CmaCh13G010690Carg04766Silver-seed gourdcarcmaB0540
CmaCh13G010690Carg09198Silver-seed gourdcarcmaB0832
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh13G010690CmaCh11G002120Cucurbita maxima (Rimu)cmacmaB127
CmaCh13G010690CmaCh01G004110Cucurbita maxima (Rimu)cmacmaB223