Carg09198 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09198
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor like
Location	Cucurbita_argyrosperma_scaffold_063 : 1039665 .. 1040600 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTGACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCCTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG

mRNA sequence

ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTGACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCCTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG

Coding sequence (CDS)

ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTGACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCCTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG

Protein sequence

MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPPPTPPPFAFDMKDPSMMHIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGGSGKDGAASGSS

Homology

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BLAST of Carg09198 vs. NCBI nr
Match: XP_022933505.1 (transcription factor TCP5-like [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 2.0e-165
Identity = 305/311 (98.07%), Postives = 305/311 (98.07%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSKSKGKWID 180
           FHQHMLFPQYHHNS   XXXXXXXXX   DMKDPSMMHIRDVVNQTTMIEKSKSKGKWID
Sbjct: 121 FHQHMLFPQYHHNSXXXXXXXXXXXXXXXDMKDPSMMHIRDVVNQTTMIEKSKSKGKWID 180

Query: 181 GGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYA 240
           GGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYA
Sbjct: 181 GGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGG 300
           SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGG
Sbjct: 241 SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGG 300

Query: 301 SGKDGAASGSS 312
           SGKDGAASGSS
Sbjct: 301 SGKDGAASGSS 311

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BLAST of Carg09198 vs. NCBI nr
Match: XP_022974230.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 570.9 bits (1470), Expect = 2.7e-159
Identity = 289/311 (92.93%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLRSS+EKGFGGK+EGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRSSQEKGFGGKDEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSKSKGKWID 180
           FHQHMLFPQYHHNSSTL         FAFD KD S   IRDVVNQTTMIEKSKSKGKWID
Sbjct: 121 FHQHMLFPQYHHNSSTL------PPPFAFDTKDSSTTLIRDVVNQTTMIEKSKSKGKWID 180

Query: 181 GGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYA 240
           GGND+EVEDYNEQIM+NNCNAYNYNTCDHDHQHSCG FPSQ EAQTSSSSCSSL FTPYA
Sbjct: 181 GGNDEEVEDYNEQIMINNCNAYNYNTCDHDHQHSCGGFPSQTEAQTSSSSCSSLFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGG 300
           SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDG G
Sbjct: 241 SYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGCG 300

Query: 301 SGKDGAASGSS 312
           SGKDGAASGSS
Sbjct: 301 SGKDGAASGSS 305

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BLAST of Carg09198 vs. NCBI nr
Match: XP_023531285.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140
Identity = 281/314 (89.49%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSKSKGKWID 180
           FHQHMLFPQ        XXXXXXXXXFAFDMKD S MHIRDVVNQTTMIEKSKSKGKWID
Sbjct: 121 FHQHMLFPQ--XXXXXXXXXXXXXXXFAFDMKDSSTMHIRDVVNQTTMIEKSKSKGKWID 180

Query: 181 GGNDQEV-EDYNEQIMMNNC--NAYNYNTCDHDHQHSCGVFPSQIEAQTSSSSCSSLVFT 240
           GGNDQEV EDYNEQIMMNNC                   VFPSQIEAQTSSSSCSSLVFT
Sbjct: 181 GGNDQEVEEDYNEQIMMNNCXXXXXXXXXXXXXXXXXXXVFPSQIEAQTSSSSCSSLVFT 240

Query: 241 PYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNND 300
           PYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHA NN+
Sbjct: 241 PYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHADNNN 300

Query: 301 GGGSGKDGAASGSS 312
            GGSGKDGAASGSS
Sbjct: 301 DGGSGKDGAASGSS 312

[Close]

BLAST of Carg09198 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 391.7 bits (1005), Expect = 2.3e-105
Identity = 229/341 (67.16%), Postives = 247/341 (72.43%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLR SKEKG   K+EGI D KY   +  T SRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRDSKEKGCEAKQEGIIDGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP G S 
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQ 120

Query: 121 FHQHM-LFP-QYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSK----- 180
           FH  M LFP QY ++SS+          FA D KD +  H+    NQTTM EK+K     
Sbjct: 121 FHHPMSLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHL----NQTTM-EKTKLWDTD 180

Query: 181 ----------SKGKWID-GGNDQEVEDYNEQI-------MMNNCNAYNYNTCDHDH---- 240
                     +KGKWID G N Q+VEDYNEQI       + N  N+Y+YNTCDH H    
Sbjct: 181 LVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFG 240

Query: 241 QHSCGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIP--SS 300
            ++ GVFPSQ+EAQTSSSS S+L FTPYASYITNPFESHIHFLSSNSH L NPF+P  S 
Sbjct: 241 NNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSP 300

Query: 301 LHPFASQNLKPFPPNFNLKQLLHAGNNDGGGSGKDGAASGS 311
           L PF SQNLKPFP NFNLKQLLH      GGSGKDGA   S
Sbjct: 301 LQPFGSQNLKPFPANFNLKQLLH-----DGGSGKDGADGNS 331

[Close]

BLAST of Carg09198 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 2.2e-92
Identity = 213/327 (65.14%), Postives = 237/327 (72.48%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLR+SKEKGF  KEEG    KY   K  T S QWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRNSKEKGFESKEEG----KYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTG SP
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSP 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSK------- 180
           FHQ              XXXXXXXXX    +  P  ++++   + +T +EK+K       
Sbjct: 121 FHQXXXXXXXXXXXXXXXXXXXXXXXXXNSLPPPFAVNVKG-DSSSTAVEKTKIWDMDLA 180

Query: 181 --------SKGKWIDGGNDQEVEDYNEQIMMNNCNAYNYNTCDHDHQHSCGVFPSQIEAQ 240
                   +KGKWIDG ++Q VEDYN        N+YN +   +++    GVFPSQIEA 
Sbjct: 181 LQGKASSLTKGKWIDGSSNQHVEDYN----FTPYNSYNSSQFGNNN----GVFPSQIEAP 240

Query: 241 TSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPF-PPN 300
           TSSSS S+L FTPYASYITNPFESHIHFLSSNSH LSNPF+PS+LHPFASQNLKPF   +
Sbjct: 241 TSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAAS 300

Query: 301 FNLKQLLHAGNNDGGG-SGKDGAASGS 311
           FN KQLLHA + +G   S KDGAA  S
Sbjct: 301 FNFKQLLHAADGNGADRSNKDGAAGDS 314

[Close]

BLAST of Carg09198 vs. TAIR10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38
Identity = 96/195 (49.23%), Postives = 117/195 (60.00%), Query Frame = 0


Query: 31  SRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLG 90
           SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L 
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 91  QPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLF------PQYHHNSSTLXXXXXX 150
           QPSKVIDWLL+  K D+DKLPPLQ P G +  + +++F            +ST       
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFPGTNL 161

Query: 151 XXXFAFDMKDPSMMHIRDVVNQTTMIEK-SKSKGKWI--DGGNDQEVEDY--NEQIMMNN 210
                +D+   S    R     TT  E     KGKWI  D  ++Q+ + +  N Q     
Sbjct: 162 GFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQDHQGFNTNHQQQFPL 221

Query: 211 CNAYNYNTCDHDHQH 214
            N YN  +  ++  H
Sbjct: 222 TNPYNNTSAYYNLGH 236

[Close]

BLAST of Carg09198 vs. TAIR10
Match: AT3G02150.2 (plastid transcription factor 1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 67/101 (66.34%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S+ S  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L 
Sbjct: 51  SSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLG 110

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGLSPFHQHMLF 128
           + QPSK +DWLLD  K +ID+LPPL I P   S F+ H  F
Sbjct: 111 VDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of Carg09198 vs. TAIR10
Match: AT5G08070.1 (TCP domain protein 17)

HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S  +++W+   NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L 
Sbjct: 13  SLLTQRWN---NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLG 72

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQ 124
           L QPSKVIDWLL+V K D+D LPPLQ P G   FHQ
Sbjct: 73  LSQPSKVIDWLLEVAKNDVDLLPPLQFPPG---FHQ 102

[Close]

BLAST of Carg09198 vs. TAIR10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 95.9 bits (237), Expect = 4.7e-20
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 32  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 91
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 92  SKVIDWLLDVTKLDIDKLPPL 113
           SK ++WL++     I  LP L
Sbjct: 92  SKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of Carg09198 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 92.4 bits (228), Expect = 5.2e-19
Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           + R  +W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L 
Sbjct: 20  NNRLSRWH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLG 79

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPL 113
             QPSK ++WL+   +  I +LP L
Sbjct: 80  YDQPSKAVEWLIKAAEDSISELPSL 103

[Close]

BLAST of Carg09198 vs. Swiss-Prot
Match: sp|Q9FME3|TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.9e-37
Identity = 96/195 (49.23%), Postives = 117/195 (60.00%), Query Frame = 0


Query: 31  SRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLG 90
           SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L 
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 91  QPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLF------PQYHHNSSTLXXXXXX 150
           QPSKVIDWLL+  K D+DKLPPLQ P G +  + +++F            +ST       
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFPGTNL 161

Query: 151 XXXFAFDMKDPSMMHIRDVVNQTTMIEK-SKSKGKWI--DGGNDQEVEDY--NEQIMMNN 210
                +D+   S    R     TT  E     KGKWI  D  ++Q+ + +  N Q     
Sbjct: 162 GFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQDHQGFNTNHQQQFPL 221

Query: 211 CNAYNYNTCDHDHQH 214
            N YN  +  ++  H
Sbjct: 222 TNPYNNTSAYYNLGH 236

[Close]

BLAST of Carg09198 vs. Swiss-Prot
Match: sp|Q9S7W5|TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.5e-31
Identity = 67/101 (66.34%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S+ S  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L 
Sbjct: 51  SSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLG 110

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGLSPFHQHMLF 128
           + QPSK +DWLLD  K +ID+LPPL I P   S F+ H  F
Sbjct: 111 VDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of Carg09198 vs. Swiss-Prot
Match: sp|Q9LEZ9|TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-31
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S  +++W+   NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L 
Sbjct: 13  SLLTQRWN---NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLG 72

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQ 124
           L QPSKVIDWLL+V K D+D LPPLQ P G   FHQ
Sbjct: 73  LSQPSKVIDWLLEVAKNDVDLLPPLQFPPG---FHQ 102

[Close]

BLAST of Carg09198 vs. Swiss-Prot
Match: sp|Q9C758|TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.4e-19
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 32  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 91
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 92  SKVIDWLLDVTKLDIDKLPPL 113
           SK ++WL++     I  LP L
Sbjct: 92  SKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of Carg09198 vs. Swiss-Prot
Match: sp|Q93V43|TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.3e-18
Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           + R  +W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L 
Sbjct: 20  NNRLSRWH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLG 79

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPL 113
             QPSK ++WL+   +  I +LP L
Sbjct: 80  YDQPSKAVEWLIKAAEDSISELPSL 103

[Close]

BLAST of Carg09198 vs. TrEMBL
Match: tr|A0A0A0LRU6|A0A0A0LRU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73
Identity = 210/408 (51.47%), Postives = 227/408 (55.64%), Query Frame = 0


Query: 1   MLR--SSKEKGFGGKEEGI---------SDEKYDMAKGST-RSRQWSGFRNPRIVRVSRS 60
           MLR  S  +KG   KEEG+         +D KY   K  T  SRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGLSPFHQHMLFPQY-------HHNSSTLXXXXXXXXXFAFDMKDPSMMHIR- 180
           LPPLQIP G SPFHQ MLFPQY              XXXXXXXXX    +  P M+ ++ 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180

Query: 181 -DVVNQTTMIEKSK----------------------SKGKWIDGGND-----QEVEDYNE 240
            D    T  +EK+K                      +KGKWIDG N+     Q+VEDYNE
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 QI------MMNNCNAYNYN-----------------------------------TCDHDH 300
           QI       M  C++   N                                         
Sbjct: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 QHSCGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLH 311
                                    TPYASYITNPFESHIHFLSSNSH LSNPF+ SSLH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

[Close]

BLAST of Carg09198 vs. TrEMBL
Match: tr|A0A1S3BX07|A0A1S3BX07_CUCME (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 210/413 (50.85%), Postives = 221/413 (53.51%), Query Frame = 0


Query: 1   MLRSSK---EKGFGGKEEGIS---------DEKYDMAKGST-RSRQWSGFRNPRIVRVSR 60
           MLR+S    +KG   KEEGIS         D KY   K  T  SRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGLSPFHQHMLFPQY----------HHNSSTLXXXXXXXXXFAFDMKDPSMM 180
            LPPLQIP G SPFHQ MLFPQY                 XXXXXXXXXF  D+K     
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXXFMLDVKS---- 188

Query: 181 HIRDVVNQTTMIEKSK----------------------SKGKWIDGGND-----QEVEDY 240
              D    T  +EK+K                      +KGKWIDG N+     Q+VEDY
Sbjct: 189 --TDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDY 248

Query: 241 NEQIMMNN------------------------------------------CNAYNYNTCD 300
           NEQI                                                        
Sbjct: 249 NEQISSQKLLSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308

Query: 301 HDHQHSCGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLS-NPFIP 311
                                       TPYASYITNPFESHIHFLSSNSH LS NPF+ 
Sbjct: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNNPFMS 368

[Close]

BLAST of Carg09198 vs. TrEMBL
Match: tr|A0A2N9H7S9|A0A2N9H7S9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38359 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 160/367 (43.60%), Postives = 202/367 (55.04%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           M+ +S+EKG   K+EG    K  ++K ++ SRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MISNSREKGIQAKQEG-DTNKEKLSKAASSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTA+QLYDLQD+L L QPSKVIDWLLD TKLDIDKLPPL +P G S 
Sbjct: 61  IRGLRDRRIRLSVPTAVQLYDLQDRLGLSQPSKVIDWLLDATKLDIDKLPPLPLPQGFSQ 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMM------HIRDVVN-QTTMIEKSK 180
           FHQ  L  + + + S+          F  D +D ++M       I D    ++   E+  
Sbjct: 121 FHQQFLSHESNASQSSFTPSFDANPTFINDGEDQNVMAKSKYWDIDDAFRAKSKEFERGS 180

Query: 181 --SKGKWIDGGNDQEVED----YNEQI-----------------MMNNCNAYN------Y 240
              KGKWI   N++ ++D    Y+ QI                 ++NN  AYN       
Sbjct: 181 VADKGKWIK-TNEEVIQDGFGGYSGQISSQKFFPITNRSSLPPGLLNNAMAYNPYHHSEP 240

Query: 241 NTCDHDHQHSCGVFPSQIEAQTSS-----------------SSCSSLVFTPYASYITNPF 300
           ++       S G+FPSQI+  T                   S+ +  +FTPY+SYIT P 
Sbjct: 241 SSLSLSQFGSHGMFPSQIDPHTMQLPSSLQQPSASPFFFCPSTMTPSIFTPYSSYITTPI 300

Query: 301 ES------HIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHAGNNDGGGS 309
           ES      H    S++ H L +P +P SLH   S  LK FP N N K L  +  N+G   
Sbjct: 301 ESDPRQFNHFQLSSNSQHVLPHPHMP-SLHSL-SFPLKSFPTNENSK-LPQSQENNGSEL 360

[Close]

BLAST of Carg09198 vs. TrEMBL
Match: tr|A0A2P4MNR5|A0A2P4MNR5_QUESU (Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.0e-53
Identity = 156/376 (41.49%), Postives = 201/376 (53.46%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           M+ +S+EK    K+EG ++ +  ++K ++ SRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MISNSREKDIQAKQEGEANAE-KLSKAASSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           +RGLRDRRIRLSVPTA+QLYDLQD+L LGQPSKVIDWLLD TKLDIDKLPPL IP G + 
Sbjct: 61  VRGLRDRRIRLSVPTAVQLYDLQDRLGLGQPSKVIDWLLDATKLDIDKLPPLPIPQGFTQ 120

Query: 121 FHQHMLFPQYHHNSSTLXXXXXXXXXFAFDMKDPSMMHIRD---------VVNQTTMIEK 180
           FH  +   + + +  +          F  D  D + M             + ++      
Sbjct: 121 FHPQLFSHEPNASQPSFIPSFDANPTFINDGADQNAMEKSKYWDIDAAFRLKSKEVETGS 180

Query: 181 SKSKGKWIDGGND---QEVEDYNEQI-------------------MMNNCNAYNYNTCDH 240
           + +KGKWI    +   + +  Y+ QI                   ++NN  AYN     H
Sbjct: 181 AANKGKWIKTNEEVIQEGIGGYSGQISAQKFFPMATDSSSNSLPGLLNNAMAYN----SH 240

Query: 241 DHQH----------SCGVFPSQIEAQTSS--------------------SSCSSLVFTPY 300
            H            S G+FPSQ+   TS+                    S+ +  +FTPY
Sbjct: 241 HHSEPSSLSLSQFGSHGLFPSQMNPHTSNAIQLPPSLPLLPASQFFFCPSTTTPALFTPY 300

Query: 301 ASYITNPFES------HIHFLSSNS-HTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLH 309
           +SYIT P ES      HI FLSS+S H L +P +P SLH   S  LK FP N N K L  
Sbjct: 301 SSYITTPIESDPRQFNHIQFLSSSSQHVLPHPLMPPSLHSM-SLPLKSFPTNENSK-LPQ 360

[Close]

BLAST of Carg09198 vs. TrEMBL
Match: tr|A0A061G4Y7|A0A061G4Y7_THECC (Teosinte branched 1, putative OS=Theobroma cacao OX=3641 GN=TCM_014288 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.4e-48
Identity = 117/201 (58.21%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 1   MLRSSKEKGFGGKEEG-ISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60
           M+ S +EK F  K+EG  +D K+  +KGS+ SRQWSGFRNPRIVRVSRSFGGKDRHSKVC
Sbjct: 1   MISSPREKDFQAKQEGETNDGKF--SKGSSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60

Query: 61  TIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLS 120
           TIRGLRDRRIRLSVPTAIQLYDLQ++L L QPSKVIDWLLD TK DIDKLPPLQ+P G  
Sbjct: 61  TIRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLLDATKTDIDKLPPLQMPPGFG 120

Query: 121 PFHQHMLFPQYHHNS-STLXXXXXXXXXFAFDMKDPSMMHIRDVVNQTTMIEKSK----- 180
            FHQ ML P   ++S S+L         F  D +DPS+   R       +  KSK     
Sbjct: 121 QFHQQMLVPHESNSSQSSLAPFFEANSMFMKDGEDPSIAAKRYWDMDAALRAKSKEVERE 180

Query: 181 -----SKGKWIDGGNDQEVED 190
                 KGKWI      E +D
Sbjct: 181 STTAAEKGKWIKVTEQHENQD 199

The following BLAST results are available for this feature:

BLAST of Carg09198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933505.1	2.0e-165	98.07	transcription factor TCP5-like [Cucurbita moschata]	[more]
XP_022974230.1	2.7e-159	92.93	transcription factor TCP5-like [Cucurbita maxima]	[more]
XP_023531285.1	1.3e-140	89.49	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022135226.1	2.3e-105	67.16	transcription factor TCP5-like [Momordica charantia]	[more]
XP_022987421.1	2.2e-92	65.14	transcription factor TCP5-like [Cucurbita maxima]	[more]

BLAST of Carg09198 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60970.1	3.8e-38	49.23	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.2	1.4e-32	66.34	plastid transcription factor 1	[more]
AT5G08070.1	2.4e-32	71.88	TCP domain protein 17	[more]
AT1G30210.1	4.7e-20	60.49	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]
AT4G18390.1	5.2e-19	54.12	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

BLAST of Carg09198 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FME3\|TCP5_ARATH	6.9e-37	49.23	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
sp\|Q9S7W5\|TCP13_ARATH	2.5e-31	66.34	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
sp\|Q9LEZ9\|TCP17_ARATH	4.3e-31	71.88	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
sp\|Q9C758\|TCP24_ARATH	8.4e-19	60.49	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
sp\|Q93V43\|TCP2_ARATH	9.3e-18	54.12	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of Carg09198 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRU6\|A0A0A0LRU6_CUCSA	1.5e-73	51.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1	[more]
tr\|A0A1S3BX07\|A0A1S3BX07_CUCME	1.4e-71	50.85	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
tr\|A0A2N9H7S9\|A0A2N9H7S9_FAGSY	6.0e-54	43.60	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38359 PE=4 SV=1	[more]
tr\|A0A2P4MNR5\|A0A2P4MNR5_QUESU	3.0e-53	41.49	Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1	[more]
tr\|A0A061G4Y7\|A0A061G4Y7_THECC	6.4e-48	58.21	Teosinte branched 1, putative OS=Theobroma cacao OX=3641 GN=TCM_014288 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09198-RA	Carg09198-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 51..118 e-value: 1.5E-23 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..311
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 2..226
None	No IPR available	PANTHER	PTHR31072:SF5	TRANSCRIPTION FACTOR TCP13-RELATED	coord: 2..226
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 51..109 score: 26.692

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09198	Cla019050	Watermelon (97103) v1	carwmB0594
Carg09198	Cla018555	Watermelon (97103) v1	carwmB0592
Carg09198	Csa1G039270	Cucumber (Chinese Long) v2	carcuB0623
Carg09198	Csa1G014310	Cucumber (Chinese Long) v2	carcuB0622
Carg09198	MELO3C010371	Melon (DHL92) v3.5.1	carmeB0602
Carg09198	MELO3C017230	Melon (DHL92) v3.5.1	carmeB0599
Carg09198	MELO3C002038	Melon (DHL92) v3.5.1	carmeB0598
Carg09198	ClCG06G015580	Watermelon (Charleston Gray)	carwcgB0581
Carg09198	ClCG04G011720	Watermelon (Charleston Gray)	carwcgB0579
Carg09198	CSPI01G02940	Wild cucumber (PI 183967)	carcpiB0628
Carg09198	CSPI01G06210	Wild cucumber (PI 183967)	carcpiB0629
Carg09198	Cucsa.198300	Cucumber (Gy14) v1	carcgyB0673
Carg09198	Cucsa.113300	Cucumber (Gy14) v1	carcgyB0669
Carg09198	CmaCh13G010690	Cucurbita maxima (Rimu)	carcmaB0832
Carg09198	CmaCh11G002120	Cucurbita maxima (Rimu)	carcmaB0830
Carg09198	CmaCh01G004110	Cucurbita maxima (Rimu)	carcmaB0835
Carg09198	CmoCh13G011140	Cucurbita moschata (Rifu)	carcmoB0810
Carg09198	CmoCh01G004390	Cucurbita moschata (Rifu)	carcmoB0813
Carg09198	CmoCh10G003140	Cucurbita moschata (Rifu)	carcmoB0805
Carg09198	CmoCh11G002140	Cucurbita moschata (Rifu)	carcmoB0808
Carg09198	Lsi07G009390	Bottle gourd (USVL1VR-Ls)	carlsiB544
Carg09198	Lsi06G014070	Bottle gourd (USVL1VR-Ls)	carlsiB540
Carg09198	Cp4.1LG04g14610	Cucurbita pepo (Zucchini)	carcpeB0847
Carg09198	Cp4.1LG18g07140	Cucurbita pepo (Zucchini)	carcpeB0845
Carg09198	CsGy1G002960	Cucumber (Gy14) v2	carcgybB0594
Carg09198	CsGy1G005920	Cucumber (Gy14) v2	carcgybB0595
Carg09198	MELO3C002038.2	Melon (DHL92) v3.6.1	carmedB0605
Carg09198	MELO3C017230.2	Melon (DHL92) v3.6.1	carmedB0606
Carg09198	CsaV3_1G002990	Cucumber (Chinese Long) v3	carcucB0629
Carg09198	CsaV3_1G006070	Cucumber (Chinese Long) v3	carcucB0630
Carg09198	Cla97C04G078570	Watermelon (97103) v2	carwmbB0621
Carg09198	Cla97C06G125110	Watermelon (97103) v2	carwmbB0623
Carg09198	Bhi08G000907	Wax gourd	carwgoB0704
Carg09198	Bhi02G000060	Wax gourd	carwgoB0707

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09198	Carg04766	Silver-seed gourd	carcarB416
Carg09198	Carg17865	Silver-seed gourd	carcarB459

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09198	Silver-seed gourd	carcarB114
Carg09198	Silver-seed gourd	carcarB496
Carg09198	Cucumber (Gy14) v2	carcgybB0598
Carg09198	Cucumber (Gy14) v1	carcgyB0676
Carg09198	Cucurbita maxima (Rimu)	carcmaB0827
Carg09198	Cucurbita maxima (Rimu)	carcmaB0833
Carg09198	Cucurbita maxima (Rimu)	carcmaB0834
Carg09198	Cucurbita moschata (Rifu)	carcmoB0811
Carg09198	Cucurbita moschata (Rifu)	carcmoB0812
Carg09198	Cucurbita pepo (Zucchini)	carcpeB0840
Carg09198	Cucurbita pepo (Zucchini)	carcpeB0841
Carg09198	Cucurbita pepo (Zucchini)	carcpeB0846
Carg09198	Wild cucumber (PI 183967)	carcpiB0632
Carg09198	Cucumber (Chinese Long) v2	carcuB0626
Carg09198	Cucumber (Chinese Long) v3	carcucB0633
Carg09198	Bottle gourd (USVL1VR-Ls)	carlsiB538
Carg09198	Bottle gourd (USVL1VR-Ls)	carlsiB539
Carg09198	Melon (DHL92) v3.5.1	carmeB0597
Carg09198	Melon (DHL92) v3.6.1	carmedB0604
Carg09198	Watermelon (Charleston Gray)	carwcgB0580
Carg09198	Watermelon (97103) v1	carwmB0591