Carg17865 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17865
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor TCP5
Location	Cucurbita_argyrosperma_scaffold_114 : 6347 .. 7285 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCACTCCCTCTGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGATGGTAATGGCGCCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

mRNA sequence

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCACTCCCTCTGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGATGGTAATGGCGCCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

Coding sequence (CDS)

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCACTCCCTCTGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGATGGTAATGGCGCCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

Protein sequence

MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGTAGDS

Homology

[Close]

BLAST of Carg17865 vs. NCBI nr
Match: XP_022921970.1 (transcription factor TCP5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 555.4 bits (1430), Expect = 1.2e-154
Identity = 308/312 (98.72%), Postives = 308/312 (98.72%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQX 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQX
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASS 180
           XXXXXXXXXXXXXXXXXXXXXXXX CNSLP PFAVDMKGDSIEKTKIWDMDLALQGKASS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180

Query: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240
           LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA
Sbjct: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGA 300
           SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 
Sbjct: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300

Query: 301 DRSNKDGTAGDS 313
           DRSNKDGTAGDS
Sbjct: 301 DRSNKDGTAGDS 312

[Close]

BLAST of Carg17865 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.1 bits (1416), Expect = 5.0e-153
Identity = 307/314 (97.77%), Postives = 309/314 (98.41%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQX 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQ 
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQ- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDS--IEKTKIWDMDLALQGKA 180
           XXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVD+KGDS  IEKTKIWDMDLALQGKA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKA 180

Query: 181 SSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240
           SSLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP
Sbjct: 181 SSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240

Query: 241 YASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300
           YASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN
Sbjct: 241 YASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300

Query: 301 GADRSNKDGTAGDS 313
           GADRSNKDG AGDS
Sbjct: 301 GADRSNKDGAAGDS 313

[Close]

BLAST of Carg17865 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 536.2 bits (1380), Expect = 7.5e-149
Identity = 301/316 (95.25%), Postives = 305/316 (96.52%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQX 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQ 
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQ- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDS----IEKTKIWDMDLALQG 180
            XXXXXXXXXXXXXXXXXXXXXXX  NSLP PFAV++KGDS    +EKTKIWDMDLALQG
Sbjct: 121 -XXXXXXXXXXXXXXXXXXXXXXXXXNSLPPPFAVNVKGDSSSTAVEKTKIWDMDLALQG 180

Query: 181 KASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFF 240
           KASSLTKGKWIDGSSNQHVEDYNFTPYN+YNSSQFGNNNGVFPSQIEAPTSSSSASALFF
Sbjct: 181 KASSLTKGKWIDGSSNQHVEDYNFTPYNSYNSSQFGNNNGVFPSQIEAPTSSSSASALFF 240

Query: 241 TPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAAD 300
           TPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAAD
Sbjct: 241 TPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAAD 300

Query: 301 GNGADRSNKDGTAGDS 313
           GNGADRSNKDG AGDS
Sbjct: 301 GNGADRSNKDGAAGDS 314

[Close]

BLAST of Carg17865 vs. NCBI nr
Match: XP_022921971.1 (transcription factor TCP5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146
Identity = 293/298 (98.32%), Postives = 294/298 (98.66%), Query Frame = 0


Query: 15  EGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 74
           +GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ
Sbjct: 3   KGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 62

Query: 75  LYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQXXXXXXXXXXXXXXX 134
           LYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQXXXXXXXXXXXXXXX
Sbjct: 63  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQXXXXXXXXXXXXXXX 122

Query: 135 XXXXXXXXXXFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 194
           XXXXXXXXXX CNSLP PFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH
Sbjct: 123 XXXXXXXXXXXCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 182

Query: 195 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 254
           VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL
Sbjct: 183 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 242

Query: 255 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGTAGDS 313
           SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG DRSNKDGTAGDS
Sbjct: 243 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 300

[Close]

BLAST of Carg17865 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 1.9e-104
Identity = 232/346 (67.05%), Postives = 247/346 (71.39%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEE----GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           MLR+SKEKG E+K+E    GKY FP+APTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLRDSKEKGCEAKQEGIIDGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS 
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQ 120

Query: 121 FHQXXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGD--------SIEKTKIW 180
           FH                          FC SLP PFAVD K          ++EKTK+W
Sbjct: 121 FHH-------PMSLFPAQYDYSSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLW 180

Query: 181 DMDLALQGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNTYNS-----------S 240
           D DL  Q KAS  TKGKWID GS++Q VEDYN       F   N Y++           S
Sbjct: 181 DTDLVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHS 240

Query: 241 QFG-NNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP- 300
           QFG NNNGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P 
Sbjct: 241 QFGNNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPP 300

Query: 301 -SALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGTAGDS 313
            S L PF SQNLKPF  A+FN KQLLH  DG     S KDG  G+S
Sbjct: 301 NSPLQPFGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 331

[Close]

BLAST of Carg17865 vs. TAIR10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-40
Identity = 96/196 (48.98%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQXXXXXXXXXXXXXXXXXXXX 140
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+  +                     
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTT 155

Query: 141 XXXXXFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYN 200
                   +L      D+ G S  + ++ D     Q ++  L KGKWI    N + +   
Sbjct: 156 FPG----TNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQG 215

Query: 201 FTPYNTYNSSQFGNNN 216
           F   NT +  QF   N
Sbjct: 216 F---NTNHQQQFPLTN 223

[Close]

BLAST of Carg17865 vs. TAIR10
Match: AT3G02150.2 (plastid transcription factor 1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGFSPFH 119
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFN 146

[Close]

BLAST of Carg17865 vs. TAIR10
Match: AT5G08070.1 (TCP domain protein 17)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLLDVTKLDIDKLPPLQIPTGF 115
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Carg17865 vs. TAIR10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 7   EKGFESKEEGKYRFPKAPTS-SRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 66
           +K  E +     RF +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRI
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRI 69

Query: 67  RLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 109
           RLSV TAIQ YDLQD+L   QPSK ++WL++     I  LP L
Sbjct: 70  RLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of Carg17865 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 37  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLD 96
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 97  VTKLDIDKLPPL 109
             +  I +LP L
Sbjct: 92  AAEDSISELPSL 103

[Close]

BLAST of Carg17865 vs. Swiss-Prot
Match: sp|Q9FME3|TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 96/196 (48.98%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQXXXXXXXXXXXXXXXXXXXX 140
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+  +                     
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTT 155

Query: 141 XXXXXFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYN 200
                   +L      D+ G S  + ++ D     Q ++  L KGKWI    N + +   
Sbjct: 156 FPG----TNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQG 215

Query: 201 FTPYNTYNSSQFGNNN 216
           F   NT +  QF   N
Sbjct: 216 F---NTNHQQQFPLTN 223

[Close]

BLAST of Carg17865 vs. Swiss-Prot
Match: sp|Q9S7W5|TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-31
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGFSPFH 119
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFN 146

[Close]

BLAST of Carg17865 vs. Swiss-Prot
Match: sp|Q9LEZ9|TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-31
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLLDVTKLDIDKLPPLQIPTGF 115
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Carg17865 vs. Swiss-Prot
Match: sp|Q9C758|TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-18
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 7   EKGFESKEEGKYRFPKAPTS-SRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 66
           +K  E +     RF +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRI
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRI 69

Query: 67  RLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPL 109
           RLSV TAIQ YDLQD+L   QPSK ++WL++     I  LP L
Sbjct: 70  RLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of Carg17865 vs. Swiss-Prot
Match: sp|Q93V43|TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.2e-18
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 37  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLD 96
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 97  VTKLDIDKLPPL 109
             +  I +LP L
Sbjct: 92  AAEDSISELPSL 103

[Close]

BLAST of Carg17865 vs. TrEMBL
Match: tr|A0A0A0LRU6|A0A0A0LRU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.5e-84
Identity = 232/408 (56.86%), Postives = 247/408 (60.54%), Query Frame = 0


Query: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGFSPFHQ-----XXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKG 180
           LPPLQIP GFSPFHQ          XXXXXXXXXXXXXXXXXXXX  NSLP PF +D+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180

Query: 181 D-------SIEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSNQHVEDYNFTPYNT 240
                   ++EKTK+WDMDLA LQ KA S       TKGKWIDGS+N          YN 
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 YNSSQFGNNNGVFPSQI------------------------------------------- 300
             SSQ   +  +  S +                                           
Sbjct: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 -----------EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 313
                                    TPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

[Close]

BLAST of Carg17865 vs. TrEMBL
Match: tr|A0A1S3BX07|A0A1S3BX07_CUCME (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 218/407 (53.56%), Postives = 233/407 (57.25%), Query Frame = 0


Query: 1   MLRNSK---EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRNS    +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGFSPFHQXXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGD--- 180
            LPPLQIP GFSPFHQ          XXXXXXXXXXXXXXX        F +D+K     
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXXFMLDVKSTDAY 188

Query: 181 ----SIEKTKIWDMDLALQGK-------ASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSS 240
               ++EKTK+WDMDLA+  +       A++ TKGKWIDGS+N          YN   SS
Sbjct: 189 QTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISS 248

Query: 241 Q-------------------------------------------------------FGNN 300
           Q                                                           
Sbjct: 249 QKLLSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308

Query: 301 NGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALS-NPFVPSALHPF 313
                                 TPYASYITNPFESHIHFLSSNSHALS NPF+ S+LHPF
Sbjct: 309 XXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPF 368

[Close]

BLAST of Carg17865 vs. TrEMBL
Match: tr|A0A2P4MNR5|A0A2P4MNR5_QUESU (Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.4e-56
Identity = 156/354 (44.07%), Postives = 192/354 (54.24%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGK---YRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTI 60
           M+ NS+EK  ++K+EG+    +  KA +SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT+
Sbjct: 1   MISNSREKDIQAKQEGEANAEKLSKAASSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTV 60

Query: 61  RGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPF 120
           RGLRDRRIRLSVPTA+QLYDLQD+L LGQPSKVIDWLLD TKLDIDKLPPL IP GF+ F
Sbjct: 61  RGLRDRRIRLSVPTAVQLYDLQDRLGLGQPSKVIDWLLDATKLDIDKLPPLPIPQGFTQF 120

Query: 121 HQXXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGK 180
           H                            ++ P         +++EK+K WD+D A + K
Sbjct: 121 HPQLFSHEPNASQPSFIPSF---------DANPTFINDGADQNAMEKSKYWDIDAAFRLK 180

Query: 181 A------SSLTKGKWID----------GSSNQHVEDYNFTPYNT---------------- 240
           +      S+  KGKWI           G  +  +    F P  T                
Sbjct: 181 SKEVETGSAANKGKWIKTNEEVIQEGIGGYSGQISAQKFFPMATDSSSNSLPGLLNNAMA 240

Query: 241 YNS-----------SQFGNNNGVFPSQIEAPTSS--------------------SSASAL 282
           YNS           SQFG ++G+FPSQ+   TS+                    S+ +  
Sbjct: 241 YNSHHHSEPSSLSLSQFG-SHGLFPSQMNPHTSNAIQLPPSLPLLPASQFFFCPSTTTPA 300

[Close]

BLAST of Carg17865 vs. TrEMBL
Match: tr|A0A2N9H7S9|A0A2N9H7S9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38359 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 159/374 (42.51%), Postives = 192/374 (51.34%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEG---KYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTI 60
           M+ NS+EKG ++K+EG   K +  KA +SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTI
Sbjct: 1   MISNSREKGIQAKQEGDTNKEKLSKAASSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTI 60

Query: 61  RGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPF 120
           RGLRDRRIRLSVPTA+QLYDLQD+L L QPSKVIDWLLD TKLDIDKLPPL +P GFS F
Sbjct: 61  RGLRDRRIRLSVPTAVQLYDLQDRLGLSQPSKVIDWLLDATKLDIDKLPPLPLPQGFSQF 120

Query: 121 HQXXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDSI-EKTKIWDMDLALQG 180
           HQ                                 F  D +  ++  K+K WD+D A + 
Sbjct: 121 HQQFLSHESNASQSSFTPSFDANP----------TFINDGEDQNVMAKSKYWDIDDAFRA 180

Query: 181 KA------SSLTKGKWID----------GSSNQHVEDYNFTP-----------------Y 240
           K+      S   KGKWI           G  +  +    F P                 Y
Sbjct: 181 KSKEFERGSVADKGKWIKTNEEVIQDGFGGYSGQISSQKFFPITNRSSLPPGLLNNAMAY 240

Query: 241 NTYNS--------SQFGNNNGVFPSQIEAPT-------SSSSASALF----------FTP 300
           N Y+         SQFG ++G+FPSQI+  T          SAS  F          FTP
Sbjct: 241 NPYHHSEPSSLSLSQFG-SHGMFPSQIDPHTMQLPSSLQQPSASPFFFCPSTMTPSIFTP 300

Query: 301 YASYITNPFES------HIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLL 307
           Y+SYIT P ES      H    S++ H L +P +PS LH  +     P  +   N    L
Sbjct: 301 YSSYITTPIESDPRQFNHFQLSSNSQHVLPHPHMPS-LHSLSF----PLKSFPTNENSKL 358

[Close]

BLAST of Carg17865 vs. TrEMBL
Match: tr|V7B0F5|V7B0F5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G202200g PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 151/379 (39.84%), Postives = 191/379 (50.40%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGK----YRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           M+  S  +G ++K+EG      +F KA +S++QW+ FRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 2   MMMASSREGQQAKQEGGPINIDKFSKASSSTKQWTAFRNPRIVRVSRSFGGKDRHSKVCT 61

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKL L QPSKVIDWLL+ TKLDIDKLPPLQ P GF  
Sbjct: 62  IRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPQGFGQ 121

Query: 121 FHQXXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDMKGDS-------------IE 180
           FH                          F +S     ++   GD+             + 
Sbjct: 122 FHH-------------------PQTLLPFHDSTASQLSLGPFGDASSTFVRDGGVQNVMA 181

Query: 181 KTKIWD-MDLALQGKASSLTKGKWIDGSSNQHVED------------------------- 240
           K++ W+ +D   + K     KGKW+  +  ++ ED                         
Sbjct: 182 KSRYWESVDSISRLKGKEAEKGKWVKTNEQENHEDDVVGSYSNLHASTQRLFPMGSGTTT 241

Query: 241 ---------YNFTPYNTYNS-------SQFGNN---------------NGV-FPSQIEAP 292
                     N  PYN YN+       SQFG +               NGV FPS +  P
Sbjct: 242 THSLLPGLLNNTMPYNPYNADPSSLSLSQFGGHGLFPSQQVDPGPSTGNGVQFPSSLPLP 301

The following BLAST results are available for this feature:

BLAST of Carg17865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921970.1	1.2e-154	98.72	transcription factor TCP5-like isoform X1 [Cucurbita moschata]	[more]
XP_023516672.1	5.0e-153	97.77	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987421.1	7.5e-149	95.25	transcription factor TCP5-like [Cucurbita maxima]	[more]
XP_022921971.1	1.6e-146	98.32	transcription factor TCP5-like isoform X2 [Cucurbita moschata]	[more]
XP_022135226.1	1.9e-104	67.05	transcription factor TCP5-like [Momordica charantia]	[more]

BLAST of Carg17865 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60970.1	5.3e-40	48.98	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.2	1.1e-32	65.74	plastid transcription factor 1	[more]
AT5G08070.1	1.8e-32	79.27	TCP domain protein 17	[more]
AT1G30210.1	1.0e-19	52.43	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]
AT4G18390.1	4.0e-19	61.11	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

BLAST of Carg17865 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FME3\|TCP5_ARATH	9.6e-39	48.98	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
sp\|Q9S7W5\|TCP13_ARATH	1.9e-31	65.74	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
sp\|Q9LEZ9\|TCP17_ARATH	3.3e-31	79.27	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
sp\|Q9C758\|TCP24_ARATH	1.9e-18	52.43	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
sp\|Q93V43\|TCP2_ARATH	7.2e-18	61.11	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of Carg17865 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRU6\|A0A0A0LRU6_CUCSA	9.5e-84	56.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1	[more]
tr\|A0A1S3BX07\|A0A1S3BX07_CUCME	4.1e-79	53.56	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
tr\|A0A2P4MNR5\|A0A2P4MNR5_QUESU	8.4e-56	44.07	Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1	[more]
tr\|A0A2N9H7S9\|A0A2N9H7S9_FAGSY	6.0e-54	42.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38359 PE=4 SV=1	[more]
tr\|V7B0F5\|V7B0F5_PHAVU	2.6e-49	39.84	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G202200g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17865-RA	Carg17865-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 47..166 e-value: 6.6E-25 score: 88.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR31072:SF24	SUBFAMILY NOT NAMED	coord: 13..206
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 13..206
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 47..105 score: 26.692

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17865	Cla018555	Watermelon (97103) v1	carwmB0459
Carg17865	Cla019050	Watermelon (97103) v1	carwmB0461
Carg17865	Csa1G039270	Cucumber (Chinese Long) v2	carcuB0492
Carg17865	Csa1G014310	Cucumber (Chinese Long) v2	carcuB0491
Carg17865	MELO3C017230	Melon (DHL92) v3.5.1	carmeB0469
Carg17865	MELO3C002038	Melon (DHL92) v3.5.1	carmeB0467
Carg17865	ClCG06G015580	Watermelon (Charleston Gray)	carwcgB0451
Carg17865	ClCG04G011720	Watermelon (Charleston Gray)	carwcgB0449
Carg17865	CSPI01G02940	Wild cucumber (PI 183967)	carcpiB0497
Carg17865	CSPI01G06210	Wild cucumber (PI 183967)	carcpiB0498
Carg17865	Cucsa.113300	Cucumber (Gy14) v1	carcgyB0530
Carg17865	Cucsa.198300	Cucumber (Gy14) v1	carcgyB0532
Carg17865	CmaCh13G010690	Cucurbita maxima (Rimu)	carcmaB0645
Carg17865	CmaCh11G002120	Cucurbita maxima (Rimu)	carcmaB0641
Carg17865	CmoCh11G002140	Cucurbita moschata (Rifu)	carcmoB0623
Carg17865	CmoCh13G011140	Cucurbita moschata (Rifu)	carcmoB0626
Carg17865	CmoCh10G003140	Cucurbita moschata (Rifu)	carcmoB0622
Carg17865	Lsi06G014070	Bottle gourd (USVL1VR-Ls)	carlsiB420
Carg17865	Cp4.1LG04g14610	Cucurbita pepo (Zucchini)	carcpeB0651
Carg17865	Cp4.1LG20g00780	Cucurbita pepo (Zucchini)	carcpeB0647
Carg17865	Cp4.1LG18g07140	Cucurbita pepo (Zucchini)	carcpeB0646
Carg17865	CsGy1G002960	Cucumber (Gy14) v2	carcgybB0468
Carg17865	CsGy1G005920	Cucumber (Gy14) v2	carcgybB0469
Carg17865	MELO3C017230.2	Melon (DHL92) v3.6.1	carmedB0472
Carg17865	MELO3C002038.2	Melon (DHL92) v3.6.1	carmedB0470
Carg17865	CsaV3_1G006070	Cucumber (Chinese Long) v3	carcucB0495
Carg17865	CsaV3_1G002990	Cucumber (Chinese Long) v3	carcucB0494
Carg17865	Cla97C04G078570	Watermelon (97103) v2	carwmbB0484
Carg17865	Cla97C06G125110	Watermelon (97103) v2	carwmbB0487
Carg17865	Bhi08G000907	Wax gourd	carwgoB0560
Carg17865	Bhi02G000060	Wax gourd	carwgoB0563

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17865	Carg04766	Silver-seed gourd	carcarB410
Carg17865	Carg09198	Silver-seed gourd	carcarB459

The following block(s) are covering this gene:

None