CmoCh11G002140 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G002140
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTCP family transcription factor
LocationCmo_Chr11 : 1068115 .. 1069050 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTCACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCTTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG

mRNA sequence

ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTCACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCTTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG

Coding sequence (CDS)

ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGTTCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTGTGTACTATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTCACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCTTCCTCTTCCTACTCCTCCTCCGTTTGCCTTCGACATGAAGGATCCTTCGATGATGCATATCAGAGACGTTGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATCAACATTCTTGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGGCAACAACGACGGCGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG
Homology
[Close]
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match: TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 97/195 (49.74%), Postives = 117/195 (60.00%), Query Frame = 1 

Query: 31  SRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLG 90
           SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L 
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 91  QPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPLPTPPPF-- 150
           QPSKVIDWLL+  K D+DKLPPLQ P G +  + +++F       S       T P    
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFPGTNL 161

Query: 151 ----AFDMKDPSMMHIRDVVNQTTMIEK-SKSKGKWI--DGGNDQEVEDY--NEQIMMNN 210
                +D+   S    R     TT  E     KGKWI  D  ++Q+ + +  N Q     
Sbjct: 162 GFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQDHQGFNTNHQQQFPL 221

Query: 211 CNAYNYNTCDHDHQH 214
            N YN  +  ++  H
Sbjct: 222 TNPYNNTSAYYNLGH 236

[Close]
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match: TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S  +++W+   NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L 
Sbjct: 13  SLLTQRWN---NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLG 72

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQ 124
           L QPSKVIDWLL+V K D+D LPPLQ P G   FHQ
Sbjct: 73  LSQPSKVIDWLLEVAKNDVDLLPPLQFPPG---FHQ 102

[Close]
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match: TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 112/305 (36.72%), Postives = 148/305 (48.52%), Query Frame = 1 

Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S+ S  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L 
Sbjct: 51  SSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLG 110

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGLSPFHQHMLFPQYHHNSSTLPLPLPTPPP 147
           + QPSK +DWLLD  K +ID+LPPL I P   S F+ H  F           L L   P 
Sbjct: 111 VDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF-----------LNLGQRPG 170

Query: 148 FAFDMKDPSMM--HIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEDYNEQIMMNNCNAYNY 207
                +DP+ +   I   V ++T   + +         ND+E +  N+ +  NN +  +Y
Sbjct: 171 -----QDPTQLGFKINGCVQKSTTTSREE---------NDRE-KGENDVVYTNNHHVGSY 230

Query: 208 NTCD------------------HDHQ-HSCGVFPSQIEAQTSSSSCSSLVFTPYASYITN 267
            T                    H HQ HS   FPSQI     ++S       P  + I +
Sbjct: 231 GTYHNLEHHHHHHQHLSLQADYHSHQLHSLVPFPSQILVCPMTTS-------PTTTTIQS 290

Query: 268 PFESHIHFLSSNSHTLSNPFIPSSLH-PFASQNLKPFPPNFN-LKQLLHAGNNDGGGSGK 309
            F S     S    TL    + S    P    +      N + L  LLH  +++ GG   
Sbjct: 291 LFPSSSSAGSGTMETLDPRQMVSHFQMPLMGNSSSSSSQNISTLYSLLHGSSSNNGGRDI 322

[Close]
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match: TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-19
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 1 

Query: 32  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 91
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 92  SKVIDWLLDVTKLDIDKLPPL 113
           SK ++WL++     I  LP L
Sbjct: 92  SKAVEWLINAASDSITDLPLL 111

[Close]
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match: PCF8_ORYSI (Transcription factor PCF8 OS=Oryza sativa subsp. indica GN=PCF8 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.5e-17
Identity = 53/116 (45.69%), Postives = 64/116 (55.17%), Query Frame = 1 

Query: 35  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 94
           + +R  R+ R +   GGKDRHSKV T RGLRDRR+RLSVPTAI  YD+QD+L + QPSK 
Sbjct: 32  AAWRTSRVARAAA--GGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKA 91

Query: 95  IDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPLPTPPPFAFD 151
           I+WL+      ID LP L                     S  LP    +PPP A D
Sbjct: 92  IEWLIRAAAAAIDALPSLDC-------------------SFALPAAASSPPPPAAD 126

[Close]
BLAST of CmoCh11G002140 vs. TrEMBL
Match: A0A0A0LRU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 6.0e-93
Identity = 233/414 (56.28%), Postives = 250/414 (60.39%), Query Frame = 1 

Query: 1   MLR--SSKEKGFGGKEEGI---------SDEKYDMAKGSTRS-RQWSGFRNPRIVRVSRS 60
           MLR  S  +KG   KEEG+         +D KY   K  T S RQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGLSPFHQHMLFPQY----HH-----------NSSTLPLPLPTPPPFAFDMKD 180
           LPPLQIP G SPFHQ MLFPQY    HH           +SS+       PPPF  D+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 PSMMHIRDVVNQTTMIEKSK----------------------SKGKWIDGGND-----QE 240
                  D    T  +EK+K                      +KGKWIDG N+     Q+
Sbjct: 181 ------TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQ 240

Query: 241 VEDYNEQI-----------------MMNNCNA--YNYNTCDHDHQH----SC-------- 300
           VEDYNEQI                 MMNN N+  YN     HDH H    SC        
Sbjct: 241 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGN 300

Query: 301 -----GVFPSQI-----EAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPF 311
                GVFPSQ+     +   SSSS SSL FTPYASYITNPFESHIHFLSSNSH LSNPF
Sbjct: 301 NNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPF 360

[Close]
BLAST of CmoCh11G002140 vs. TrEMBL
Match: A0A061G4Y7_THECC (Teosinte branched 1, putative OS=Theobroma cacao GN=TCM_014288 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-47
Identity = 116/201 (57.71%), Postives = 133/201 (66.17%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEG-ISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60
           M+ S +EK F  K+EG  +D K+  +KGS+ SRQWSGFRNPRIVRVSRSFGGKDRHSKVC
Sbjct: 1   MISSPREKDFQAKQEGETNDGKF--SKGSSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60

Query: 61  TIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLS 120
           TIRGLRDRRIRLSVPTAIQLYDLQ++L L QPSKVIDWLLD TK DIDKLPPLQ+P G  
Sbjct: 61  TIRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLLDATKTDIDKLPPLQMPPGFG 120

Query: 121 PFHQHMLFPQYHHNSSTLPLP-LPTPPPFAFDMKDPSMMHIRDVVNQTTMIEKSK----- 180
            FHQ ML P   ++S +   P       F  D +DPS+   R       +  KSK     
Sbjct: 121 QFHQQMLVPHESNSSQSSLAPFFEANSMFMKDGEDPSIAAKRYWDMDAALRAKSKEVERE 180

Query: 181 -----SKGKWIDGGNDQEVED 190
                 KGKWI      E +D
Sbjct: 181 STTAAEKGKWIKVTEQHENQD 199

[Close]
BLAST of CmoCh11G002140 vs. TrEMBL
Match: B9RLM2_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1469470 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.1e-45
Identity = 98/141 (69.50%), Postives = 109/141 (77.30%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEG-ISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60
           M+ SS+EKGF  K+EG  +D     +K  + SRQWS FRNPRIVRVSRSFGGKDRHSKVC
Sbjct: 1   MITSSREKGFQAKQEGDANDNNKKFSKAPSTSRQWSAFRNPRIVRVSRSFGGKDRHSKVC 60

Query: 61  TIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLS 120
           TIRGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLLD TK DIDKLPPLQ+P G  
Sbjct: 61  TIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLPPLQLPQGFG 120

Query: 121 PFHQHMLFPQYHHNSSTLPLP 141
            FHQ ML     ++S +   P
Sbjct: 121 QFHQQMLVSHESNSSQSSLAP 141

[Close]
BLAST of CmoCh11G002140 vs. TrEMBL
Match: A0A0L9UBJ4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g032600 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-43
Identity = 110/205 (53.66%), Postives = 127/205 (61.95%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           ML +S  +G   K+EG +      +K S+ +RQWS FRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLMASSREGQQAKQEGGAINIDKFSKASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKL L QPSKVIDWLL+ TKLDIDKLPPLQ P G   
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPQGFGQ 120

Query: 121 FHQ-HMLFPQYHHNSSTLPLPLPTPPPFAFDMKDPSMMHIRDVVNQTTMIE--------- 180
           FH    L P +  +SS L L      PF     + S   +RD   Q +M +         
Sbjct: 121 FHHPQTLLPFHDSSSSQLSL-----GPFG----ESSSSFVRDGGVQNSMAKSRYWDSIDS 180

Query: 181 ------KSKSKGKWIDGGNDQEVED 190
                 K   KGKW+    ++  ED
Sbjct: 181 ISRLKGKEGEKGKWVKTNEEENQED 196

[Close]
BLAST of CmoCh11G002140 vs. TrEMBL
Match: A0A0S3RH44_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G274000 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-43
Identity = 110/205 (53.66%), Postives = 127/205 (61.95%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 60
           ML +S  +G   K+EG +      +K S+ +RQWS FRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 1   MLMASSREGQQAKQEGGAINIDKFSKASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCT 60

Query: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSP 120
           IRGLRDRRIRLSVPTAIQLYDLQDKL L QPSKVIDWLL+ TKLDIDKLPPLQ P G   
Sbjct: 61  IRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPQGFGQ 120

Query: 121 FHQ-HMLFPQYHHNSSTLPLPLPTPPPFAFDMKDPSMMHIRDVVNQTTMIE--------- 180
           FH    L P +  +SS L L      PF     + S   +RD   Q +M +         
Sbjct: 121 FHHPQTLLPFHDSSSSQLSL-----GPFG----ESSSSFVRDGGVQNSMAKSRYWDSIDS 180

Query: 181 ------KSKSKGKWIDGGNDQEVED 190
                 K   KGKW+    ++  ED
Sbjct: 181 ISRLKGKEGEKGKWVKTNEEENQED 196

[Close]
BLAST of CmoCh11G002140 vs. TAIR10
Match: AT5G60970.1 (AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-38
Identity = 97/195 (49.74%), Postives = 117/195 (60.00%), Query Frame = 1 

Query: 31  SRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLG 90
           SRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L 
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 91  QPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPLPTPPPF-- 150
           QPSKVIDWLL+  K D+DKLPPLQ P G +  + +++F       S       T P    
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFPGTNL 161

Query: 151 ----AFDMKDPSMMHIRDVVNQTTMIEK-SKSKGKWI--DGGNDQEVEDY--NEQIMMNN 210
                +D+   S    R     TT  E     KGKWI  D  ++Q+ + +  N Q     
Sbjct: 162 GFLENWDLGGSSRTRARLTDTTTTQRESFDLDKGKWIKNDENSNQDHQGFNTNHQQQFPL 221

Query: 211 CNAYNYNTCDHDHQH 214
            N YN  +  ++  H
Sbjct: 222 TNPYNNTSAYYNLGH 236

[Close]
BLAST of CmoCh11G002140 vs. TAIR10
Match: AT5G08070.1 (AT5G08070.1 TCP domain protein 17)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S  +++W+   NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L 
Sbjct: 13  SLLTQRWN---NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLG 72

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQ 124
           L QPSKVIDWLL+V K D+D LPPLQ P G   FHQ
Sbjct: 73  LSQPSKVIDWLLEVAKNDVDLLPPLQFPPG---FHQ 102

[Close]
BLAST of CmoCh11G002140 vs. TAIR10
Match: AT3G02150.2 (AT3G02150.2 plastid transcription factor 1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 112/305 (36.72%), Postives = 148/305 (48.52%), Query Frame = 1 

Query: 28  STRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLK 87
           S+ S  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L 
Sbjct: 51  SSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLG 110

Query: 88  LGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGLSPFHQHMLFPQYHHNSSTLPLPLPTPPP 147
           + QPSK +DWLLD  K +ID+LPPL I P   S F+ H  F           L L   P 
Sbjct: 111 VDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF-----------LNLGQRPG 170

Query: 148 FAFDMKDPSMM--HIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEDYNEQIMMNNCNAYNY 207
                +DP+ +   I   V ++T   + +         ND+E +  N+ +  NN +  +Y
Sbjct: 171 -----QDPTQLGFKINGCVQKSTTTSREE---------NDRE-KGENDVVYTNNHHVGSY 230

Query: 208 NTCD------------------HDHQ-HSCGVFPSQIEAQTSSSSCSSLVFTPYASYITN 267
            T                    H HQ HS   FPSQI     ++S       P  + I +
Sbjct: 231 GTYHNLEHHHHHHQHLSLQADYHSHQLHSLVPFPSQILVCPMTTS-------PTTTTIQS 290

Query: 268 PFESHIHFLSSNSHTLSNPFIPSSLH-PFASQNLKPFPPNFN-LKQLLHAGNNDGGGSGK 309
            F S     S    TL    + S    P    +      N + L  LLH  +++ GG   
Sbjct: 291 LFPSSSSAGSGTMETLDPRQMVSHFQMPLMGNSSSSSSQNISTLYSLLHGSSSNNGGRDI 322

[Close]
BLAST of CmoCh11G002140 vs. TAIR10
Match: AT1G30210.1 (AT1G30210.1 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 95.9 bits (237), Expect = 4.7e-20
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 1 

Query: 32  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 91
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 92  SKVIDWLLDVTKLDIDKLPPL 113
           SK ++WL++     I  LP L
Sbjct: 92  SKAVEWLINAASDSITDLPLL 111

[Close]
BLAST of CmoCh11G002140 vs. TAIR10
Match: AT1G53230.1 (AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-17
Identity = 48/101 (47.52%), Postives = 56/101 (55.45%), Query Frame = 1 

Query: 45  VSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKL 104
           + RS G KDRHSKVCT +G RDRR+RLS PTAIQ YD+QD+L   +PSK +DWL+   K 
Sbjct: 43  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKS 102

Query: 105 DIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPLPLPTPP 146
            ID L  L          QH           T  L  P PP
Sbjct: 103 AIDDLAQLPPWNPADTLRQHAAAAANAKPRKTKTLISPPPP 143

[Close]
BLAST of CmoCh11G002140 vs. NCBI nr
Match: gi|778656111|ref|XP_011648477.1| (PREDICTED: transcription factor TCP5-like [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 8.7e-93
Identity = 233/414 (56.28%), Postives = 250/414 (60.39%), Query Frame = 1 

Query: 1   MLR--SSKEKGFGGKEEGI---------SDEKYDMAKGSTRS-RQWSGFRNPRIVRVSRS 60
           MLR  S  +KG   KEEG+         +D KY   K  T S RQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGLSPFHQHMLFPQY----HH-----------NSSTLPLPLPTPPPFAFDMKD 180
           LPPLQIP G SPFHQ MLFPQY    HH           +SS+       PPPF  D+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 PSMMHIRDVVNQTTMIEKSK----------------------SKGKWIDGGND-----QE 240
                  D    T  +EK+K                      +KGKWIDG N+     Q+
Sbjct: 181 ------TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQ 240

Query: 241 VEDYNEQI-----------------MMNNCNA--YNYNTCDHDHQH----SC-------- 300
           VEDYNEQI                 MMNN N+  YN     HDH H    SC        
Sbjct: 241 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGN 300

Query: 301 -----GVFPSQI-----EAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPF 311
                GVFPSQ+     +   SSSS SSL FTPYASYITNPFESHIHFLSSNSH LSNPF
Sbjct: 301 NNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPF 360

[Close]
BLAST of CmoCh11G002140 vs. NCBI nr
Match: gi|659106246|ref|XP_008453284.1| (PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 5.6e-92
Identity = 234/413 (56.66%), Postives = 252/413 (61.02%), Query Frame = 1 

Query: 1   MLRSSK---EKGFGGKEEGIS---------DEKYDMAKGSTRS-RQWSGFRNPRIVRVSR 60
           MLR+S    +KG   KEEGIS         D KY   K  T S RQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGLSPFHQHMLFPQY----HH------NSSTLPLPLPTPPPFAFDMKDPSMM 180
            LPPLQIP G SPFHQ MLFPQY    HH      +SS+       PPPF  D+K     
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKS---- 188

Query: 181 HIRDVVNQTTMIEKSK----------------------SKGKWIDGGND-----QEVEDY 240
              D    T  +EK+K                      +KGKWIDG N+     Q+VEDY
Sbjct: 189 --TDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDY 248

Query: 241 NEQI-----------------MMNNCNA--YNYNTCDHDHQH-----SC----------- 300
           NEQI                 MMNN N+  YN     HDH H     SC           
Sbjct: 249 NEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNN 308

Query: 301 --GVFPSQI-----EAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLS-NPFIP 311
             G+FPSQ+      + +SSSS SSL FTPYASYITNPFESHIHFLSSNSH LS NPF+ 
Sbjct: 309 SNGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMS 368

[Close]
BLAST of CmoCh11G002140 vs. NCBI nr
Match: gi|590668795|ref|XP_007037593.1| (Teosinte branched 1, putative [Theobroma cacao])

HSP 1 Score: 197.2 bits (500), Expect = 4.2e-47
Identity = 116/201 (57.71%), Postives = 133/201 (66.17%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEG-ISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60
           M+ S +EK F  K+EG  +D K+  +KGS+ SRQWSGFRNPRIVRVSRSFGGKDRHSKVC
Sbjct: 1   MISSPREKDFQAKQEGETNDGKF--SKGSSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60

Query: 61  TIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLS 120
           TIRGLRDRRIRLSVPTAIQLYDLQ++L L QPSKVIDWLLD TK DIDKLPPLQ+P G  
Sbjct: 61  TIRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLLDATKTDIDKLPPLQMPPGFG 120

Query: 121 PFHQHMLFPQYHHNSSTLPLP-LPTPPPFAFDMKDPSMMHIRDVVNQTTMIEKSK----- 180
            FHQ ML P   ++S +   P       F  D +DPS+   R       +  KSK     
Sbjct: 121 QFHQQMLVPHESNSSQSSLAPFFEANSMFMKDGEDPSIAAKRYWDMDAALRAKSKEVERE 180

Query: 181 -----SKGKWIDGGNDQEVED 190
                 KGKWI      E +D
Sbjct: 181 STTAAEKGKWIKVTEQHENQD 199

[Close]
BLAST of CmoCh11G002140 vs. NCBI nr
Match: gi|255547167|ref|XP_002514641.1| (PREDICTED: transcription factor TCP5 [Ricinus communis])

HSP 1 Score: 189.5 bits (480), Expect = 8.8e-45
Identity = 98/141 (69.50%), Postives = 109/141 (77.30%), Query Frame = 1 

Query: 1   MLRSSKEKGFGGKEEG-ISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVC 60
           M+ SS+EKGF  K+EG  +D     +K  + SRQWS FRNPRIVRVSRSFGGKDRHSKVC
Sbjct: 1   MITSSREKGFQAKQEGDANDNNKKFSKAPSTSRQWSAFRNPRIVRVSRSFGGKDRHSKVC 60

Query: 61  TIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLS 120
           TIRGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLLD TK DIDKLPPLQ+P G  
Sbjct: 61  TIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLPPLQLPQGFG 120

Query: 121 PFHQHMLFPQYHHNSSTLPLP 141
            FHQ ML     ++S +   P
Sbjct: 121 QFHQQMLVSHESNSSQSSLAP 141

[Close]
BLAST of CmoCh11G002140 vs. NCBI nr
Match: gi|1012006127|ref|XP_015943543.1| (PREDICTED: transcription factor TCP5-like [Arachis duranensis])

HSP 1 Score: 186.8 bits (473), Expect = 5.7e-44
Identity = 143/324 (44.14%), Postives = 177/324 (54.63%), Query Frame = 1 

Query: 27  GSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL 86
           G++ SRQW+ FRNPRIVRVSRS GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQD+L
Sbjct: 24  GTSSSRQWTAFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRL 83

Query: 87  KLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPF-HQHMLFPQYHHNSSTLPLPLPTPP 146
            LGQPSKVIDWLL  TKLDIDKLPPLQIP G + F HQ  L P  HH+  +L        
Sbjct: 84  GLGQPSKVIDWLLQATKLDIDKLPPLQIPPGFAQFHHQQTLIPLSHHHQFSLGGFYDANS 143

Query: 147 PFAFDMKDPSMMHIRDVVNQTTMIEKS--KSKGKWIDGGNDQEVEDYNEQIMMNNCNAYN 206
              +DM D S + ++   + T          KGKWI   N    E+ +  +++NN   YN
Sbjct: 144 SRFWDM-DSSSISLKGKESDTITHPAGVISEKGKWIK-TNQHVDENQDGLLLLNNAMGYN 203

Query: 207 YNTCDHDHQHSCG---------VFPSQ--IEAQTSSSSCSS-LVFTP-YASYITNPFES- 266
            +        S           +FPSQ  ++ Q SSSS ++   FTP YA ++ N   S 
Sbjct: 204 NSPSGLTLSSSSSSSQFGSHALLFPSQQLLDPQFSSSSATTPSTFTPYYAPFVANSSSST 263

Query: 267 ----------------HIHFLSSNSHTLSNPFIPSS--LHPFASQN-----------LKP 305
                           HI  LS  S  + +PFIPSS   H   S N           ++ 
Sbjct: 264 TTTMVENNSDALRQFNHIQILS--SQVMPHPFIPSSSLFHSINSNNNNNDNNSAAATIRR 323

The following BLAST results are available for this feature:
BLAST of CmoCh11G002140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP5_ARATH1.5e-3649.74Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=1 SV=1[more]
TCP17_ARATH3.2e-3171.88Transcription factor TCP17 OS=Arabidopsis thaliana GN=TCP17 PE=1 SV=1[more]
TCP13_ARATH2.0e-2836.72Transcription factor TCP13 OS=Arabidopsis thaliana GN=TCP13 PE=1 SV=1[more]
TCP24_ARATH8.3e-1960.49Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1[more]
PCF8_ORYSI4.5e-1745.69Transcription factor PCF8 OS=Oryza sativa subsp. indica GN=PCF8 PE=3 SV=1[more]
BLAST of CmoCh11G002140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRU6_CUCSA6.0e-9356.28Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014310 PE=4 SV=1[more]
A0A061G4Y7_THECC2.9e-4757.71Teosinte branched 1, putative OS=Theobroma cacao GN=TCM_014288 PE=4 SV=1[more]
B9RLM2_RICCO6.1e-4569.50Transcription factor, putative OS=Ricinus communis GN=RCOM_1469470 PE=4 SV=1[more]
A0A0L9UBJ4_PHAAN2.6e-4353.66Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g032600 PE=4 SV=1[more]
A0A0S3RH44_PHAAN2.6e-4353.66Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G274000 PE=... [more]
BLAST of CmoCh11G002140 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60970.18.5e-3849.74 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5[more]
AT5G08070.11.8e-3271.88 TCP domain protein 17[more]
AT3G02150.21.1e-2936.72 plastid transcription factor 1[more]
AT1G30210.14.7e-2060.49 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24[more]
AT1G53230.11.3e-1747.52 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
BLAST of CmoCh11G002140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778656111|ref|XP_011648477.1|8.7e-9356.28PREDICTED: transcription factor TCP5-like [Cucumis sativus][more]
gi|659106246|ref|XP_008453284.1|5.6e-9256.66PREDICTED: transcription factor TCP5 [Cucumis melo][more]
gi|590668795|ref|XP_007037593.1|4.2e-4757.71Teosinte branched 1, putative [Theobroma cacao][more]
gi|255547167|ref|XP_002514641.1|8.8e-4569.50PREDICTED: transcription factor TCP5 [Ricinus communis][more]
gi|1012006127|ref|XP_015943543.1|5.7e-4444.14PREDICTED: transcription factor TCP5-like [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G002140.1CmoCh11G002140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 51..118
score: 4.1
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 51..109
score: 26
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..126
score: 2.3
NoneNo IPR availablePANTHERPTHR31072:SF24TRANSCRIPTION FACTOR TCP17-RELATEDcoord: 1..126
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G002140Cucsa.113300Cucumber (Gy14) v1cgycmoB0259
CmoCh11G002140Cucsa.198300Cucumber (Gy14) v1cgycmoB0578
CmoCh11G002140CmaCh11G002120Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G002140CmaCh13G010690Cucurbita maxima (Rimu)cmacmoB215
CmoCh11G002140Cla019050Watermelon (97103) v1cmowmB128
CmoCh11G002140Cla018555Watermelon (97103) v1cmowmB108
CmoCh11G002140Csa1G014310Cucumber (Chinese Long) v2cmocuB076
CmoCh11G002140Csa1G039270Cucumber (Chinese Long) v2cmocuB077
CmoCh11G002140MELO3C002038Melon (DHL92) v3.5.1cmomeB084
CmoCh11G002140MELO3C017230Melon (DHL92) v3.5.1cmomeB109
CmoCh11G002140ClCG04G011720Watermelon (Charleston Gray)cmowcgB106
CmoCh11G002140ClCG06G015580Watermelon (Charleston Gray)cmowcgB119
CmoCh11G002140CSPI01G02940Wild cucumber (PI 183967)cmocpiB079
CmoCh11G002140CSPI01G06210Wild cucumber (PI 183967)cmocpiB080
CmoCh11G002140Lsi06G014070Bottle gourd (USVL1VR-Ls)cmolsiB128
CmoCh11G002140Cp4.1LG18g07140Cucurbita pepo (Zucchini)cmocpeB105
CmoCh11G002140Cp4.1LG04g14610Cucurbita pepo (Zucchini)cmocpeB129
CmoCh11G002140MELO3C017230.2Melon (DHL92) v3.6.1cmomedB117
CmoCh11G002140MELO3C002038.2Melon (DHL92) v3.6.1cmomedB090
CmoCh11G002140CsaV3_1G006070Cucumber (Chinese Long) v3cmocucB0092
CmoCh11G002140CsaV3_1G002990Cucumber (Chinese Long) v3cmocucB0091
CmoCh11G002140Cla97C04G078570Watermelon (97103) v2cmowmbB107
CmoCh11G002140Cla97C06G125110Watermelon (97103) v2cmowmbB123
CmoCh11G002140Bhi02G000060Wax gourdcmowgoB0161
CmoCh11G002140Bhi08G000907Wax gourdcmowgoB0131
CmoCh11G002140CsGy1G005920Cucumber (Gy14) v2cgybcmoB029
CmoCh11G002140CsGy1G002960Cucumber (Gy14) v2cgybcmoB028
CmoCh11G002140Carg17865Silver-seed gourdcarcmoB0623
CmoCh11G002140Carg04766Silver-seed gourdcarcmoB0524
CmoCh11G002140Carg09198Silver-seed gourdcarcmoB0808
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G002140CmoCh10G003140Cucurbita moschata (Rifu)cmocmoB045
CmoCh11G002140CmoCh13G011140Cucurbita moschata (Rifu)cmocmoB089
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G002140Wax gourdcmowgoB0170
CmoCh11G002140Cucurbita moschata (Rifu)cmocmoB100
CmoCh11G002140Cucumber (Gy14) v1cgycmoB0785
CmoCh11G002140Cucurbita maxima (Rimu)cmacmoB075
CmoCh11G002140Cucurbita maxima (Rimu)cmacmoB389
CmoCh11G002140Wild cucumber (PI 183967)cmocpiB124
CmoCh11G002140Cucumber (Chinese Long) v2cmocuB122
CmoCh11G002140Cucurbita pepo (Zucchini)cmocpeB083
CmoCh11G002140Cucurbita pepo (Zucchini)cmocpeB116
CmoCh11G002140Bottle gourd (USVL1VR-Ls)cmolsiB094
CmoCh11G002140Bottle gourd (USVL1VR-Ls)cmolsiB114
CmoCh11G002140Melon (DHL92) v3.6.1cmomedB083