CmaCh12G007210 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G007210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPectinesterase
LocationCma_Chr12 : 4018128 .. 4018987 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCGTTGATAATCGAAGCAAAGCCACTGGATTCTCCACGGCAAATTCAGCTACTCTAAGTAAGCTACAATTCATGTAATTTTTGTTCATTCATGTGATATCCCACCTTGATTGGGGAGGAGAACGAAACACCTTTATAAGGATGTTGAAACCTTTCCTTAGCGGACGCGCTTTAAACCTTGAGGGCAAACCTGAAAGGGAAAGATAAAGAAAAACAATATCTGCTAGCTGTGGGTCTGGACTGTTACAAATGGTATTAGAGCCAGACACCAGACCATGTGCCAGCAAGGAGGTTGTTTCCCGAAGGGGGTAGACACGAGGCAGTGTGCCAATAAGGATGCTGTGCCCCGAAAGGGGTGGATTTAGTGGGGGTCCCGCTGGGCTCTGAAGTGGGGTAGAAGTGGGGTGAATTGTGCTATCCCATATTGGTTGGGAGGAGAACGAAACATCCTTTATAAGGATGTGGAAACCTTTCCTTAGCTGATGCGTTTTAAAGTCTGGAAGGGAAGCTTAAAAGAGAAAGTTCAAAGAGGACAATCTCTAATAGCATATCTACTAGTATAATACAATATCTTCTATCTCGTAGGGTGGGCGTGAGCCTGAGCCAGAGCTGTTGTAATTTCTTATTCAAAATTATAACCCAAAACCCATTTTCAGCTG

mRNA sequence

ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCCTG

Coding sequence (CDS)

ACCTTTGACTTCAATTCCACCGTTTCCTTAGACGGTACGGGAAACTTTGTTAAAATCAGTGACGCCATAGTCGCTGCACCGAACTTCACCACCACCAGATTCTACATTCACATCAAACCCGGAATCTATAACGAACATATCGAAATTCCATCTCAAAAAACATTTATTTCGTTGATTGGAGACAATGCTTCCACAACGATCATCCTG

Protein sequence

TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTIIL
Homology
[Close]
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-13
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1 

Query: 3   DFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDN 62
           ++N +V++DGTGNF  I+DA+ AAPN + TRF I+IK G Y E++E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 63  ASTTII 69
              T+I
Sbjct: 279 IGKTVI 284

[Close]
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-12
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           ++ V+ DGTGNF  ISDA++AAP+++T R+ IH+K G+Y E++EI  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 65  TTII 69
            T+I
Sbjct: 274 ATVI 277

[Close]
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           ++ +V+LDGTGNF KI DAI  AP++++TRF I+IK G+Y E++EI  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 64  STTII 69
             T+I
Sbjct: 271 DVTVI 275

[Close]
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-11
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1 

Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           N  V+ +GTGN+  I +AI AAPN + TRF I+IK G Y E+IEIP +KT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 65  TTII 69
            T+I
Sbjct: 267 RTVI 270

[Close]
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 1 

Query: 8   VSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTI 67
           V+ DGTGNF  I++AI  APN +  R  I++K G+Y+E+I+IP  KT I LIGD +  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 68  I 69
           I
Sbjct: 300 I 300

[Close]
BLAST of CmaCh12G007210 vs. TrEMBL
Match: A0A0A0KNI2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.2e-21
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FN TVSLDGTGNFVKI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 26 FIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGD 85

Query: 62 NASTTIIL 70
          +ASTTII+
Sbjct: 86 DASTTIIV 93

[Close]
BLAST of CmaCh12G007210 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-20
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FNSTVSLDGT NF+KI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 19 FSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGD 78

Query: 62 NASTTIIL 70
          ++STTII+
Sbjct: 79 DSSTTIIV 86

[Close]
BLAST of CmaCh12G007210 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-15
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 1 

Query: 1  TFDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIG 60
          +  FN TVSLDG+GNF +ISDAI AAPN + TRFYIH+ PG Y+E ++IP  K FI+L+G
Sbjct: 23 SLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHVAPGTYHETLQIPRLKKFIALVG 82

Query: 61 DNASTTIIL 70
          D+  TTII+
Sbjct: 83 DDPFTTIII 91

[Close]
BLAST of CmaCh12G007210 vs. TrEMBL
Match: I1L1X0_SOYBN (Pectinesterase OS=Glycine max GN=GLYMA_09G077100 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-11
Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           F++ V+ DGTGNF K+ DA++AAPN++  R+ IHIK G+YNE++EI  +K  + ++GD  
Sbjct: 208 FDAVVAADGTGNFTKVMDAVLAAPNYSMQRYVIHIKRGVYNENVEIKKKKWNLMMVGDGM 267

Query: 64  STTII 69
             T+I
Sbjct: 268 DNTVI 272

[Close]
BLAST of CmaCh12G007210 vs. TrEMBL
Match: A0A0B2PRS0_GLYSO (Pectinesterase OS=Glycine soja GN=glysoja_049709 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-11
Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           F++ V+ DGTGNF K+ DA++AAPN++  R+ IHIK G+YNE++EI  +K  + ++GD  
Sbjct: 208 FDAVVAADGTGNFTKVMDAVLAAPNYSMQRYVIHIKRGVYNENVEIKKKKWNLMMVGDGM 267

Query: 64  STTII 69
             T+I
Sbjct: 268 DNTVI 272

[Close]
BLAST of CmaCh12G007210 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-14
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1 

Query: 3   DFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDN 62
           ++N +V++DGTGNF  I+DA+ AAPN + TRF I+IK G Y E++E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 63  ASTTII 69
              T+I
Sbjct: 279 IGKTVI 284

[Close]
BLAST of CmaCh12G007210 vs. TAIR10
Match: AT3G43270.1 (AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-13
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           ++ V+ DGTGNF  ISDA++AAP+++T R+ IH+K G+Y E++EI  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 65  TTII 69
            T+I
Sbjct: 274 ATVI 277

[Close]
BLAST of CmaCh12G007210 vs. TAIR10
Match: AT4G33220.1 (AT4G33220.1 pectin methylesterase 44)

HSP 1 Score: 70.1 bits (170), Expect = 6.1e-13
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 4   FNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNA 63
           ++ +V+LDGTGNF KI DAI  AP++++TRF I+IK G+Y E++EI  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 64  STTII 69
             T+I
Sbjct: 271 DVTVI 275

[Close]
BLAST of CmaCh12G007210 vs. TAIR10
Match: AT4G02320.1 (AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-12
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1 

Query: 5   NSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNAS 64
           N  V+ +GTGN+  I +AI AAPN + TRF I+IK G Y E+IEIP +KT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 65  TTII 69
            T+I
Sbjct: 267 RTVI 270

[Close]
BLAST of CmaCh12G007210 vs. TAIR10
Match: AT2G26440.1 (AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-11
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 1 

Query: 8   VSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTI 67
           V+ DGTGNF  I++AI  APN +  R  I++K G+Y+E+I+IP  KT I LIGD +  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 68  I 69
           I
Sbjct: 300 I 300

[Close]
BLAST of CmaCh12G007210 vs. NCBI nr
Match: gi|778708551|ref|XP_011656233.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 7.5e-21
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FN TVSLDGTGNFVKI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 26 FIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGD 85

Query: 62 NASTTIIL 70
          +ASTTII+
Sbjct: 86 DASTTIIV 93

[Close]
BLAST of CmaCh12G007210 vs. NCBI nr
Match: gi|700196023|gb|KGN51200.1| (hypothetical protein Csa_5G488760 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 7.5e-21
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FN TVSLDGTGNFVKI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 26 FIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGD 85

Query: 62 NASTTIIL 70
          +ASTTII+
Sbjct: 86 DASTTIIV 93

[Close]
BLAST of CmaCh12G007210 vs. NCBI nr
Match: gi|778697621|ref|XP_011654361.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FNSTVSLDGT NF+KI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 26 FSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGD 85

Query: 62 NASTTIIL 70
          ++STTII+
Sbjct: 86 DSSTTIIV 93

[Close]
BLAST of CmaCh12G007210 vs. NCBI nr
Match: gi|700198848|gb|KGN54006.1| (hypothetical protein Csa_4G260430 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 1 

Query: 2  FDFNSTVSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGD 61
          F FNSTVSLDGT NF+KI+DAI AAPNF+TTRFYIH+KPG Y E IE+P +KT I+LIGD
Sbjct: 19 FSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGD 78

Query: 62 NASTTIIL 70
          ++STTII+
Sbjct: 79 DSSTTIIV 86

[Close]
BLAST of CmaCh12G007210 vs. NCBI nr
Match: gi|659131731|ref|XP_008465826.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-19
Identity = 46/62 (74.19%), Postives = 57/62 (91.94%), Query Frame = 1 

Query: 8  VSLDGTGNFVKISDAIVAAPNFTTTRFYIHIKPGIYNEHIEIPSQKTFISLIGDNASTTI 67
          +SLDGTGNFVK++DAI AAPNF+ TRFYIH+KPG Y E IE+PS+KTFI+LIGD++STTI
Sbjct: 19 LSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 78

Query: 68 IL 70
          I+
Sbjct: 79 IV 80

The following BLAST results are available for this feature:
BLAST of CmaCh12G007210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PME39_ARATH2.0e-1351.52Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=P... [more]
PME32_ARATH6.3e-1246.88Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=P... [more]
PME44_ARATH1.1e-1149.23Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=P... [more]
PME40_ARATH7.0e-1153.13Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=P... [more]
PME12_ARATH4.5e-1050.82Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=P... [more]
BLAST of CmaCh12G007210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNI2_CUCSA5.2e-2176.47Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1[more]
A0A0A0L1M3_CUCSA1.2e-2073.53Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1[more]
A0A0A0LR14_CUCSA1.1e-1560.87Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1[more]
I1L1X0_SOYBN2.2e-1147.69Pectinesterase OS=Glycine max GN=GLYMA_09G077100 PE=4 SV=1[more]
A0A0B2PRS0_GLYSO2.2e-1147.69Pectinesterase OS=Glycine soja GN=glysoja_049709 PE=4 SV=1[more]
BLAST of CmaCh12G007210 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02300.11.1e-1451.52 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT3G43270.13.6e-1346.88 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT4G33220.16.1e-1349.23 pectin methylesterase 44[more]
AT4G02320.13.9e-1253.13 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT2G26440.12.6e-1150.82 Plant invertase/pectin methylesterase inhibitor superfamily[more]
BLAST of CmaCh12G007210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708551|ref|XP_011656233.1|7.5e-2176.47PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus][more]
gi|700196023|gb|KGN51200.1|7.5e-2176.47hypothetical protein Csa_5G488760 [Cucumis sativus][more]
gi|778697621|ref|XP_011654361.1|1.7e-2073.53PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus][more]
gi|700198848|gb|KGN54006.1|1.7e-2073.53hypothetical protein Csa_4G260430 [Cucumis sativus][more]
gi|659131731|ref|XP_008465826.1|4.1e-1974.19PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000070Pectinesterase_cat
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR018040Pectinesterase_Tyr_AS
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0005618 cell wall
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G007210.1CmaCh12G007210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 6..68
score: 8.7
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 4..68
score: 3.5
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 6..68
score: 1.1
IPR018040Pectinesterase, Tyr active sitePROSITEPS00800PECTINESTERASE_1coord: 30..49
scor
NoneNo IPR availablePANTHERPTHR31707FAMILY NOT NAMEDcoord: 5..68
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G007210Csa5G488760Cucumber (Chinese Long) v2cmacuB188
CmaCh12G007210CSPI05G16610Wild cucumber (PI 183967)cmacpiB192
CmaCh12G007210CmoCh05G009280Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G007210Cp4.1LG11g07420Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G007210Cp4.1LG07g05500Cucurbita pepo (Zucchini)cmacpeB203
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G007210CmaCh05G009180Cucurbita maxima (Rimu)cmacmaB201
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G007210Silver-seed gourdcarcmaB0172
CmaCh12G007210Cucurbita moschata (Rifu)cmacmoB176