CSPI05G16610 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G16610
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pectinesterase
Location	Chr5 : 17923301 .. 17923651 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATATCCACACTTAAAATGCTCTTTATAGTGTATTTGTTAGTTGTTGTTATTGTTGAGTTTTCTGATTGCTTTAGTTTCAATTTCACAGTGTCTTTAGATGGTACAGGAAATTTTGTTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACAGCAAGATTTTACATTCATGTAAAACCTGGAACTTACAAGGAGATTATTGAAGTTCCATATGAGAAAACTTGTATTGCTTTAATTGGAGATGATGCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCCTGA

mRNA sequence

ATGACAATATCCACACTTAAAATGCTCTTTATAGTGTATTTGTTAGTTGTTGTTATTGTTGAGTTTTCTGATTGCTTTAGTTTCAATTTCACAGTGTCTTTAGATGGTACAGGAAATTTTGTTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACAGCAAGATTTTACATTCATGTAAAACCTGGAACTTACAAGGAGATTATTGAAGTTCCATATGAGAAAACTTGTATTGCTTTAATTGGAGATGATGCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCCTGA

Coding sequence (CDS)

ATGACAATATCCACACTTAAAATGCTCTTTATAGTGTATTTGTTAGTTGTTGTTATTGTTGAGTTTTCTGATTGCTTTAGTTTCAATTTCACAGTGTCTTTAGATGGTACAGGAAATTTTGTTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACAGCAAGATTTTACATTCATGTAAAACCTGGAACTTACAAGGAGATTATTGAAGTTCCATATGAGAAAACTTGTATTGCTTTAATTGGAGATGATGCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCCTGA

Homology

[Close]

BLAST of CSPI05G16610 vs. Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           ++N +V++DGTGNF  INDA+ AAPN S  RF I++K G Y E +E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 87  ASTTIIVNNRSNGTGSSTASSATL 111
              T+I  NRS   G ST  + T+
Sbjct: 279 IGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of CSPI05G16610 vs. Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-14
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           S +  V+ DGTGNF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD 
Sbjct: 235 SESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDG 294

Query: 87  ASTTIIVNNRSNGTGSSTASSATLS 112
           +  T I  NRS G G +T  SATL+
Sbjct: 295 SDVTFITGNRSVGDGWTTFRSATLA 319

[Close]

BLAST of CSPI05G16610 vs. Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1


Query: 32  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTI 91
           V+ DGTGNF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD    T+
Sbjct: 217 VAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATV 276

Query: 92  IVNNRSNGTGSSTASSATLS 112
           I  NRS   G +T  SAT +
Sbjct: 277 ITGNRSFIDGWTTFRSATFA 296

[Close]

BLAST of CSPI05G16610 vs. Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1


Query: 23  SDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIAL 82
           +D  S +  V+ DGTGNF  + DA+ AAP++S  R+ I++K GTYKE +E+  +K  + +
Sbjct: 202 ADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMM 261

Query: 83  IGDDASTTIIVNNRSNGTGSSTASSATLS 112
           IGD    TII  NRS   G +T  SAT +
Sbjct: 262 IGDGMDATIISGNRSFVDGWTTFRSATFA 290

[Close]

BLAST of CSPI05G16610 vs. Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           +++ +V+LDGTGNF KI DAI  AP++S+ RF I++K G Y E +E+  +K  I ++GD 
Sbjct: 210 TYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDG 269

Query: 87  ASTTIIVNNRSNGTGSSTASSATLS 112
              T+I  NRS   G +T  SAT +
Sbjct: 270 IDVTVISGNRSFIDGWTTFRSATFA 294

[Close]

BLAST of CSPI05G16610 vs. TrEMBL
Match: A0A0A0KNI2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 1


Query: 1   MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYI 60
           MTISTLKMLFIVYLLVVVIVEFSDCF FNFTVSLDGTGNFVKINDAIAAAPNFST RFYI
Sbjct: 1   MTISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYI 60

Query: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS 117
           HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS
Sbjct: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS 116

[Close]

BLAST of CSPI05G16610 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-43
Identity = 94/104 (90.38%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 8   MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTY 67
           M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY
Sbjct: 1   MIFVLYLLVVVIVEFSDCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTY 60

Query: 68  KEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           +EIIEVPYEKTCIALIGDD+STTIIVNNRSNGTGSSTASSATL+
Sbjct: 61  QEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATLT 104

[Close]

BLAST of CSPI05G16610 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-21
Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 9   LFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYK 68
           LF  + L+++I       SFN TVSLDG+GNF +I+DAIAAAPN S  RFYIHV PGTY 
Sbjct: 11  LFCFFNLMLLI----HSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHVAPGTYH 70

Query: 69  EIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           E +++P  K  IAL+GDD  TTII++NRSNGTG  T +SATL+
Sbjct: 71  ETLQIPRLKKFIALVGDDPFTTIIIDNRSNGTGFKTNNSATLT 109

[Close]

BLAST of CSPI05G16610 vs. TrEMBL
Match: W9QFB9_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_012492 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.8e-13
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 10  FIVYLLVVVIVEFSDC-----FSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKP 69
           F+V L+++ I++++         FN  V  D +GNF  ++DA+ AAP  S  R+ I +KP
Sbjct: 12  FLVLLMLLFIMQYAKTTHCATIPFNVIVQKDNSGNFTTVSDAVKAAPKNSKTRYMIRIKP 71

Query: 70  GTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           G YKE +E+  + T I+LIGDD +TTII  +RSNG+G  T  + TL+
Sbjct: 72  GRYKERVEIESDLTYISLIGDDVTTTIITFDRSNGSGFKTNETGTLT 118

[Close]

BLAST of CSPI05G16610 vs. TrEMBL
Match: A0A068V3C2_COFCA (Pectinesterase OS=Coffea canephora GN=GSCOC_T00042937001 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.8e-13
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1


Query: 29  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDAS 88
           N TV+ DG+GNF  INDA+ AAPN ST RF I++K G Y E IEV   KT I  +GD   
Sbjct: 273 NLTVAKDGSGNFTTINDALQAAPNSSTTRFVIYIKAGAYYEYIEVERRKTMIMFMGDGIG 332

Query: 89  TTIIVNNRSNGTGSSTASSATLS 112
            T+I  NRS G G +T  S+T++
Sbjct: 333 KTVIKGNRSVGAGWTTFRSSTVA 355

[Close]

BLAST of CSPI05G16610 vs. TAIR10
Match: AT4G02300.1 (AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           ++N +V++DGTGNF  INDA+ AAPN S  RF I++K G Y E +E+P +KT I  IGD 
Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDG 278

Query: 87  ASTTIIVNNRSNGTGSSTASSATL 111
              T+I  NRS   G ST  + T+
Sbjct: 279 IGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of CSPI05G16610 vs. TAIR10
Match: AT2G26440.1 (AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 78.6 bits (192), Expect = 2.9e-15
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           S +  V+ DGTGNF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD 
Sbjct: 235 SESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDG 294

Query: 87  ASTTIIVNNRSNGTGSSTASSATLS 112
           +  T I  NRS G G +T  SATL+
Sbjct: 295 SDVTFITGNRSVGDGWTTFRSATLA 319

[Close]

BLAST of CSPI05G16610 vs. TAIR10
Match: AT3G43270.1 (AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 73.6 bits (179), Expect = 9.3e-14
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1


Query: 32  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTI 91
           V+ DGTGNF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD    T+
Sbjct: 217 VAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATV 276

Query: 92  IVNNRSNGTGSSTASSATLS 112
           I  NRS   G +T  SAT +
Sbjct: 277 ITGNRSFIDGWTTFRSATFA 296

[Close]

BLAST of CSPI05G16610 vs. TAIR10
Match: AT4G33220.1 (AT4G33220.1 pectin methylesterase 44)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-13
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 27  SFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDD 86
           +++ +V+LDGTGNF KI DAI  AP++S+ RF I++K G Y E +E+  +K  I ++GD 
Sbjct: 210 TYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDG 269

Query: 87  ASTTIIVNNRSNGTGSSTASSATLS 112
              T+I  NRS   G +T  SAT +
Sbjct: 270 IDVTVISGNRSFIDGWTTFRSATFA 294

[Close]

BLAST of CSPI05G16610 vs. TAIR10
Match: AT4G02320.1 (AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-13
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 29  NFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDAS 88
           N  V+ +GTGN+  I +AI+AAPN S  RF I++K G Y E IE+P EKT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 89  TTIIVNNRSNGTGSSTASSATL 111
            T+I  NRS   G +   SAT+
Sbjct: 267 RTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of CSPI05G16610 vs. NCBI nr
Match: gi|700196023|gb|KGN51200.1| (hypothetical protein Csa_5G488760 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 1


Query: 1   MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYI 60
           MTISTLKMLFIVYLLVVVIVEFSDCF FNFTVSLDGTGNFVKINDAIAAAPNFST RFYI
Sbjct: 1   MTISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYI 60

Query: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS 117
           HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS
Sbjct: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLSKLQLS 116

[Close]

BLAST of CSPI05G16610 vs. NCBI nr
Match: gi|778708551|ref|XP_011656233.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYI 60
           MTISTLKMLFIVYLLVVVIVEFSDCF FNFTVSLDGTGNFVKINDAIAAAPNFST RFYI
Sbjct: 1   MTISTLKMLFIVYLLVVVIVEFSDCFIFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYI 60

Query: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATL+
Sbjct: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLT 111

[Close]

BLAST of CSPI05G16610 vs. NCBI nr
Match: gi|778697621|ref|XP_011654361.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-45
Identity = 99/111 (89.19%), Postives = 107/111 (96.40%), Query Frame = 1


Query: 1   MTISTLKMLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYI 60
           MTI TL+M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYI
Sbjct: 1   MTIFTLEMIFVLYLLVVVIVEFSDCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYI 60

Query: 61  HVKPGTYKEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           HVKPGTY+EIIEVPYEKTCIALIGDD+STTIIVNNRSNGTGSSTASSATL+
Sbjct: 61  HVKPGTYQEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATLT 111

[Close]

BLAST of CSPI05G16610 vs. NCBI nr
Match: gi|700198848|gb|KGN54006.1| (hypothetical protein Csa_4G260430 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43
Identity = 94/104 (90.38%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 8   MLFIVYLLVVVIVEFSDCFSFNFTVSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTY 67
           M+F++YLLVVVIVEFSDCFSFN TVSLDGT NF+KINDAIAAAPNFST RFYIHVKPGTY
Sbjct: 1   MIFVLYLLVVVIVEFSDCFSFNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTY 60

Query: 68  KEIIEVPYEKTCIALIGDDASTTIIVNNRSNGTGSSTASSATLS 112
           +EIIEVPYEKTCIALIGDD+STTIIVNNRSNGTGSSTASSATL+
Sbjct: 61  QEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATLT 104

[Close]

BLAST of CSPI05G16610 vs. NCBI nr
Match: gi|659131731|ref|XP_008465826.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 3.0e-30
Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 1


Query: 32  VSLDGTGNFVKINDAIAAAPNFSTARFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTI 91
           +SLDGTGNFVK+NDAIAAAPNFS  RFYIHVKPGTY+EIIEVP EKT IALIGDD+STTI
Sbjct: 19  LSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 78

Query: 92  IVNNRSNGTGSSTASSATLS 112
           IVNNRSNGTGSSTASSATL+
Sbjct: 79  IVNNRSNGTGSSTASSATLT 98

The following BLAST results are available for this feature:

BLAST of CSPI05G16610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME39_ARATH	1.8e-14	48.81	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=P...	[more]
PME12_ARATH	5.2e-14	51.76	Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=P...	[more]
PME32_ARATH	1.7e-12	47.50	Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=P...	[more]
PME_PRUPE	2.2e-12	43.82	Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1	[more]
PME44_ARATH	2.2e-12	44.71	Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of CSPI05G16610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI2_CUCSA	1.5e-52	98.28	Pectinesterase OS=Cucumis sativus GN=Csa_5G488760 PE=4 SV=1	[more]
A0A0A0L1M3_CUCSA	1.7e-43	90.38	Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1	[more]
A0A0A0LR14_CUCSA	4.0e-21	59.22	Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1	[more]
W9QFB9_9ROSA	6.8e-13	42.06	Pectinesterase OS=Morus notabilis GN=L484_012492 PE=4 SV=1	[more]
A0A068V3C2_COFCA	6.8e-13	51.81	Pectinesterase OS=Coffea canephora GN=GSCOC_T00042937001 PE=4 SV=1	[more]

BLAST of CSPI05G16610 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02300.1	1.0e-15	48.81	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT2G26440.1	2.9e-15	51.76	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G43270.1	9.3e-14	47.50	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G33220.1	1.2e-13	44.71	pectin methylesterase 44	[more]
AT4G02320.1	1.2e-13	48.78	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of CSPI05G16610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196023\|gb\|KGN51200.1\|	2.1e-52	98.28	hypothetical protein Csa_5G488760 [Cucumis sativus]	[more]
gi\|778708551\|ref\|XP_011656233.1\|	1.7e-49	97.30	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]	[more]
gi\|778697621\|ref\|XP_011654361.1\|	1.5e-45	89.19	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]	[more]
gi\|700198848\|gb\|KGN54006.1\|	2.4e-43	90.38	hypothetical protein Csa_4G260430 [Cucumis sativus]	[more]
gi\|659131731\|ref\|XP_008465826.1\|	3.0e-30	88.75	PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018040	Pectinesterase_Tyr_AS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G16610.1	CSPI05G16610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 30..111 score: 2.2
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 26..110 score: 3.45
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 26..111 score: 1.9
IPR018040	Pectinesterase, Tyr active site	PROSITE	PS00800	PECTINESTERASE_1	coord: 54..73 scor
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 29..110 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G16610	Csa5G488760	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G16610	CmaCh12G007210	Cucurbita maxima (Rimu)	cmacpiB192

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G16610	Cucumber (Gy14) v1	cgycpiB415
CSPI05G16610	Cucurbita maxima (Rimu)	cmacpiB763
CSPI05G16610	Cucurbita maxima (Rimu)	cmacpiB813
CSPI05G16610	Cucurbita moschata (Rifu)	cmocpiB175
CSPI05G16610	Cucurbita moschata (Rifu)	cmocpiB798
CSPI05G16610	Melon (DHL92) v3.5.1	cpimeB350
CSPI05G16610	Watermelon (Charleston Gray)	cpiwcgB355
CSPI05G16610	Watermelon (97103) v1	cpiwmB369
CSPI05G16610	Cucurbita pepo (Zucchini)	cpecpiB115
CSPI05G16610	Cucurbita pepo (Zucchini)	cpecpiB445
CSPI05G16610	Cucurbita pepo (Zucchini)	cpecpiB836
CSPI05G16610	Bottle gourd (USVL1VR-Ls)	cpilsiB351
CSPI05G16610	Melon (DHL92) v3.6.1	cpimedB340
CSPI05G16610	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G16610	Silver-seed gourd	carcpiB1100
CSPI05G16610	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G16610	Watermelon (97103) v2	cpiwmbB428
CSPI05G16610	Wax gourd	cpiwgoB475