CmaCh11G004260 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G004260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Sequence-specific DNA binding transcription factors, putative
Location	Cma_Chr11 : 2098744 .. 2099928 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCATGTGCTTGCATGTGCCGTGTCTCTCTCTAAATGCCCCACCATTGCCCTGCTTTAACCACATAAATTCTTCTGTTTCTCATGCTTCCCTCTTCATTTCTCTCTCAATTTTACACTTTTCATCACTTTTTCTCAGGTATGTTCATTTTCTTCATTCTTTTTTCCTTTTTTTTTTTTAATTTTTTTTTTCTTTTTATGCACAACCCATGAATTAAATTCTCTCGGGATTTATCTTTGATTCAATCTCCGGCCAACAATTCATGGTTTTGTCTGTTTGTAATATATATGCATGTTGCAATATCAGAATGCGCAATCCCAGTTGTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGCCAAGCGCTCATCGCCGCCACGTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTACTAACCCCAAAATTACGCGAATTATGTGGAGTAGTGTGAAGATTGTGAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGTAAGAAGCCGGCGGCGGAGTTGATTGCGAAAACGTTGGCGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTAGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATACCATCATCATCATGAATACCCAAACATAATTATAATCAAACCCCCCTTCTTTTGCACATATATGTAGAGCTAAATTTGAGGTTAATCTTAGTGAATAGTTTGGGATCATTTTGTGAGTTTTATGTACAAATAAATGTTTATGTAAGTTAAGACAAATATGAATTTGTTTGAAGCATGTATTTGTGTATTGAATGTGGCGGAGCATTTAGTTAGGGAAGAAGGCCAAATCCAAAGCCGGTAAGTGTTCATGCATGTTGGAAAATGAGTGTAGTTTCTTCAACATTATTATTATTATTTTTTTTTTTTTGTTTTTTTTGGAGGCTTGGCATAATGTTTTTGTTCATAAATGCTCAATCTTGG

mRNA sequence

ATGAACTCCATGTGCTTGCATGTGCCGTGTCTCTCTCTAAATGCCCCACCATTGCCCTGCTTTAACCACATAAATTCTTCTGTTTCTCATGCTTCCCTCTTCATTTCTCTCTCAATTTTACACTTTTCATCACTTTTTCTCAGAATGCGCAATCCCAGTTGTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGCCAAGCGCTCATCGCCGCCACGTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTACTAACCCCAAAATTACGCGAATTATGTGGAGTAGTGTGAAGATTGTGAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGTAAGAAGCCGGCGGCGGAGTTGATTGCGAAAACGTTGGCGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTAGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATACCATCATCATCATGAATACCCAAACATAATTATAATCAAACCCCCCTTCTTTTGCACATATATGTAGAGCTAAATTTGAGGTTAATCTTAGTGAATAGTTTGGGATCATTTTGTGAGTTTTATGTACAAATAAATGTTTATGTAAGTTAAGACAAATATGAATTTGTTTGAAGCATGTATTTGTGTATTGAATGTGGCGGAGCATTTAGTTAGGGAAGAAGGCCAAATCCAAAGCCGGTAAGTGTTCATGCATGTTGGAAAATGAGTGTAGTTTCTTCAACATTATTATTATTATTTTTTTTTTTTTGTTTTTTTTGGAGGCTTGGCATAATGTTTTTGTTCATAAATGCTCAATCTTGG

Coding sequence (CDS)

ATGAACTCCATGTGCTTGCATGTGCCGTGTCTCTCTCTAAATGCCCCACCATTGCCCTGCTTTAACCACATAAATTCTTCTGTTTCTCATGCTTCCCTCTTCATTTCTCTCTCAATTTTACACTTTTCATCACTTTTTCTCAGAATGCGCAATCCCAGTTGTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGCCAAGCGCTCATCGCCGCCACGTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTACTAACCCCAAAATTACGCGAATTATGTGGAGTAGTGTGAAGATTGTGAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGTAAGAAGCCGGCGGCGGAGTTGATTGCGAAAACGTTGGCGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTAGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATACCATCATCATCATGA

Protein sequence

MNSMCLHVPCLSLNAPPLPCFNHINSSVSHASLFISLSILHFSSLFLRMRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTTNPKITRIMWSSVKIVKRSRRVQRMRRKCKKPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIPSSS

Homology

[Close]

BLAST of CmaCh11G004260 vs. TrEMBL
Match: A0A0A0LWQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 131/184 (71.20%), Postives = 150/184 (81.52%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           M+N + LK+EF KKWMMGL+IYTT+N+NMTVT+RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 109 IAATSVDDGSRLVADVLLGR--------TTNPKITRIMWSSVKIVKRSRRV-QRMRRKCK 168
           IA +SVD+ S  VA+ +LGR         +N KITR  WSS KIVKRSRRV +R RR+ K
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI 224
             AA  IA+ L +KR KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LATAY 
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

[Close]

BLAST of CmaCh11G004260 vs. TrEMBL
Match: A0A061GQA9_THECC (Sequence-specific DNA binding transcription factors, putative OS=Theobroma cacao GN=TCM_038548 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 121/270 (44.81%), Postives = 158/270 (58.52%), Query Frame = 1


Query: 1   MNSMCLHVPCLSLNAPPLPCFNHIN-----SSVSHASLFISLS------ILHFSS----- 60
           M +MCLHV CLSL  PPL  F  IN     SS+SH+SL + +S      ++HF       
Sbjct: 1   MQAMCLHVLCLSLIDPPLLSFEQINGVSAHSSLSHSSLSLYVSEPLSWILIHFLGSVERL 60

Query: 61  -----LFL--------------------RMRNPSCLKREFLKKWMMGLEIYTTSNKNMTV 120
                LFL                    RMR+P  LK+EFLKKW+MG +  ++S K+M+V
Sbjct: 61  HSLQLLFLILLSRLILALSISVQEKILARMRSPGSLKQEFLKKWIMGFQRCSSSKKSMSV 120

Query: 121 TQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTTNPKITRIMW 180
             RK AIKLSADIA+AS+R   T WS+ALIA+ S D   + + + +LG  +   I    +
Sbjct: 121 LDRKKAIKLSADIAMASARKGTTCWSRALIASASKDGSDKHLVEQILGPESERLILMKKF 180

Query: 181 S-----------SVKIVKRSRRVQRMRRKCKKPA-AELIAKTLARKRRKVLRGLVPGGEF 218
           S           S KI+KRS  ++R R+   + A A  IAK L RKR +VL+ L+PGGEF
Sbjct: 181 STGALVCSKRIRSKKILKRSCGIRRTRKCAPQAALASSIAKRLVRKRTQVLKSLIPGGEF 240

[Close]

BLAST of CmaCh11G004260 vs. TrEMBL
Match: V4UQX9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.0e-33
Identity = 92/178 (51.69%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           MR PS LK+EFL+KW++GL+I ++S K+M++++RK AIKLSADIA+AS+RN  T WS+AL
Sbjct: 1   MRAPSSLKQEFLRKWILGLQICSSSAKSMSISERKKAIKLSADIAMASARNGRTSWSRAL 60

Query: 109 IAATSVDDG-SRLVADVLLGRTTNPKITRIMWS-----SVKIVKRSRRV---QRMRRKCK 168
           IA+ S DD   +L    +LG     ++T+I  S       KI+K+S      +RM+R   
Sbjct: 61  IASASKDDNHGKLFVQQILGSDCE-RLTKISTSIKRLRCKKILKKSSGTIIRRRMKRIPD 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 218
           K  A  IAK +  KR ++L+ LVPGG FMDE+SLIEETLDYI +L+AQ+DVMR LA A
Sbjct: 121 KAVASSIAKQMVNKRTQILKSLVPGGVFMDEVSLIEETLDYILSLRAQIDVMRSLADA 177

[Close]

BLAST of CmaCh11G004260 vs. TrEMBL
Match: A0A067FGP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030032mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.0e-33
Identity = 92/178 (51.69%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           MR PS LK+EFL+KW++GL+I ++S K+M++++RK AIKLSADIA+AS+RN  T WS+AL
Sbjct: 1   MRAPSSLKQEFLRKWILGLQICSSSAKSMSISERKKAIKLSADIAMASARNGRTSWSRAL 60

Query: 109 IAATSVDDG-SRLVADVLLGRTTNPKITRIMWS-----SVKIVKRSRRV---QRMRRKCK 168
           IA+ S DD   +L    +LG     ++T+I  S       KI+K+S      +RM+R   
Sbjct: 61  IASASKDDNHGKLFVQQILGSDCE-RLTKISTSIKRLRCKKILKKSSGTIIRRRMKRIPD 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 218
           K  A  IAK +  KR ++L+ LVPGG FMDE+SLIEETLDYI +L+AQ+DVMR LA A
Sbjct: 121 KAVASSIAKQMVNKRTQILKSLVPGGVFMDEVSLIEETLDYILSLRAQIDVMRSLADA 177

[Close]

BLAST of CmaCh11G004260 vs. TrEMBL
Match: F6HYP3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01230 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-32
Identity = 88/179 (49.16%), Postives = 123/179 (68.72%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           MR P+ LK+EFLKKW+MGL++ ++S K M+  +RK AIKLSAD+A+AS+RN  TRWS+AL
Sbjct: 1   MRPPTSLKKEFLKKWIMGLQLCSSSKKEMSFLERKKAIKLSADVAMASARNATTRWSRAL 60

Query: 109 IAATSVDDGSRLVADVLLGRTTNPKITRIMWSSVKIVKRSRRVQRMRRKC-----KKPAA 168
           I+  S DD ++ + + +LG   +  + R   S V   KR+R  + +R+ C     +K ++
Sbjct: 61  ISNASKDDSNKGLVECILG-PESESLKRASMSLVLCNKRNRSKKILRKSCSIRRARKSSS 120

Query: 169 EL-----IAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 218
           ++     IAK L +KR +VL+ LVPGG  M E SLIEETLDYI +L+AQVDVMR LA A
Sbjct: 121 QMVMASSIAKRLVKKRTQVLKSLVPGGGSMSEFSLIEETLDYILSLRAQVDVMRHLANA 178

[Close]

BLAST of CmaCh11G004260 vs. TAIR10
Match: AT4G30410.2 (AT4G30410.2 sequence-specific DNA binding transcription factors)

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27
Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           M+  S +  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+AL
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 109 IAATSVDDG---SRLVADVLLGRTTNPKITRIMWSSVKIVKRSRRVQRMRRKCKKPAAEL 168
           I  T+ +D     ++++ +      N K+ +      KIV+RS+++ R + K     A  
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAA 120

Query: 169 IAKTLARKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA 218
            AK L ++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Sbjct: 121 KAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of CmaCh11G004260 vs. TAIR10
Match: AT5G57780.1 (AT5G57780.1 EXPRESSED IN: 18 plant structures)

HSP 1 Score: 98.6 bits (244), Expect = 5.2e-21
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKN-MTVTQRKNAIKLSADIALASSRNCATRWSQA 108
           M   + +K+EF+KKW+  L +  +S ++ + VT+RKNAI+LS+D+A+A++RN +T WS+A
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 109 LIAATSVDDGSRLVADVLLGRTTNPKITRIMWSSVKIVKRSRRVQRMRRKCK--KPAAEL 168
           LI+ +               +T N  + R      +I+K++R   RM+ +C   +     
Sbjct: 62  LISRSG-------------NKTANKPMAR------RILKKAR--NRMKNRCNILRRNGNF 121

Query: 169 IAKTLARKRRKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRCLA 216
            AKT  RKR  +L+ LVPGGE +D+   LI ETLDYI  L+AQVDVMR +A
Sbjct: 122 TAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of CmaCh11G004260 vs. NCBI nr
Match: gi|659086184|ref|XP_008443801.1| (PREDICTED: transcription factor bHLH147 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 6.1e-56
Identity = 131/184 (71.20%), Postives = 152/184 (82.61%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           M+NP+ LK+EFLKKWMMGL+IYTT+N+NMTV +RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 109 IAATSVDDGSRLVADVLLGR--------TTNPKITRIMWSSVKIVKRSRRV-QRMRRKCK 168
           IA +SVD+ S LVA+ +LGR         +N KITR  WSS KIVKRSRRV +R RR+ K
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI 224
             AA  IA+ L ++R KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LA+AY 
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

[Close]

BLAST of CmaCh11G004260 vs. NCBI nr
Match: gi|449464326|ref|XP_004149880.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55
Identity = 131/184 (71.20%), Postives = 150/184 (81.52%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           M+N + LK+EF KKWMMGL+IYTT+N+NMTVT+RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 109 IAATSVDDGSRLVADVLLGR--------TTNPKITRIMWSSVKIVKRSRRV-QRMRRKCK 168
           IA +SVD+ S  VA+ +LGR         +N KITR  WSS KIVKRSRRV +R RR+ K
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI 224
             AA  IA+ L +KR KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LATAY 
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

[Close]

BLAST of CmaCh11G004260 vs. NCBI nr
Match: gi|590580096|ref|XP_007013974.1| (Sequence-specific DNA binding transcription factors, putative [Theobroma cacao])

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 121/270 (44.81%), Postives = 158/270 (58.52%), Query Frame = 1


Query: 1   MNSMCLHVPCLSLNAPPLPCFNHIN-----SSVSHASLFISLS------ILHFSS----- 60
           M +MCLHV CLSL  PPL  F  IN     SS+SH+SL + +S      ++HF       
Sbjct: 1   MQAMCLHVLCLSLIDPPLLSFEQINGVSAHSSLSHSSLSLYVSEPLSWILIHFLGSVERL 60

Query: 61  -----LFL--------------------RMRNPSCLKREFLKKWMMGLEIYTTSNKNMTV 120
                LFL                    RMR+P  LK+EFLKKW+MG +  ++S K+M+V
Sbjct: 61  HSLQLLFLILLSRLILALSISVQEKILARMRSPGSLKQEFLKKWIMGFQRCSSSKKSMSV 120

Query: 121 TQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTTNPKITRIMW 180
             RK AIKLSADIA+AS+R   T WS+ALIA+ S D   + + + +LG  +   I    +
Sbjct: 121 LDRKKAIKLSADIAMASARKGTTCWSRALIASASKDGSDKHLVEQILGPESERLILMKKF 180

Query: 181 S-----------SVKIVKRSRRVQRMRRKCKKPA-AELIAKTLARKRRKVLRGLVPGGEF 218
           S           S KI+KRS  ++R R+   + A A  IAK L RKR +VL+ L+PGGEF
Sbjct: 181 STGALVCSKRIRSKKILKRSCGIRRTRKCAPQAALASSIAKRLVRKRTQVLKSLIPGGEF 240

[Close]

BLAST of CmaCh11G004260 vs. NCBI nr
Match: gi|641843466|gb|KDO62366.1| (hypothetical protein CISIN_1g030032mg [Citrus sinensis])

HSP 1 Score: 149.4 bits (376), Expect = 7.2e-33
Identity = 92/178 (51.69%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           MR PS LK+EFL+KW++GL+I ++S K+M++++RK AIKLSADIA+AS+RN  T WS+AL
Sbjct: 1   MRAPSSLKQEFLRKWILGLQICSSSAKSMSISERKKAIKLSADIAMASARNGRTSWSRAL 60

Query: 109 IAATSVDDG-SRLVADVLLGRTTNPKITRIMWS-----SVKIVKRSRRV---QRMRRKCK 168
           IA+ S DD   +L    +LG     ++T+I  S       KI+K+S      +RM+R   
Sbjct: 61  IASASKDDNHGKLFVQQILGSDCE-RLTKISTSIKRLRCKKILKKSSGTIIRRRMKRIPD 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 218
           K  A  IAK +  KR ++L+ LVPGG FMDE+SLIEETLDYI +L+AQ+DVMR LA A
Sbjct: 121 KAVASSIAKQMVNKRTQILKSLVPGGVFMDEVSLIEETLDYILSLRAQIDVMRSLADA 177

[Close]

BLAST of CmaCh11G004260 vs. NCBI nr
Match: gi|567922968|ref|XP_006453490.1| (hypothetical protein CICLE_v10009640mg [Citrus clementina])

HSP 1 Score: 149.4 bits (376), Expect = 7.2e-33
Identity = 92/178 (51.69%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108
           MR PS LK+EFL+KW++GL+I ++S K+M++++RK AIKLSADIA+AS+RN  T WS+AL
Sbjct: 1   MRAPSSLKQEFLRKWILGLQICSSSAKSMSISERKKAIKLSADIAMASARNGRTSWSRAL 60

Query: 109 IAATSVDDG-SRLVADVLLGRTTNPKITRIMWS-----SVKIVKRSRRV---QRMRRKCK 168
           IA+ S DD   +L    +LG     ++T+I  S       KI+K+S      +RM+R   
Sbjct: 61  IASASKDDNHGKLFVQQILGSDCE-RLTKISTSIKRLRCKKILKKSSGTIIRRRMKRIPD 120

Query: 169 KPAAELIAKTLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 218
           K  A  IAK +  KR ++L+ LVPGG FMDE+SLIEETLDYI +L+AQ+DVMR LA A
Sbjct: 121 KAVASSIAKQMVNKRTQILKSLVPGGVFMDEVSLIEETLDYILSLRAQIDVMRSLADA 177

The following BLAST results are available for this feature:

BLAST of CmaCh11G004260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh11G004260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ3_CUCSA	1.2e-55	71.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1	[more]
A0A061GQA9_THECC	1.4e-38	44.81	Sequence-specific DNA binding transcription factors, putative OS=Theobroma cacao...	[more]
V4UQX9_9ROSI	5.0e-33	51.69	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1	[more]
A0A067FGP7_CITSI	5.0e-33	51.69	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030032mg PE=4 SV=1	[more]
F6HYP3_VITVI	3.3e-32	49.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01230 PE=4 SV=...	[more]

BLAST of CmaCh11G004260 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30410.2	2.8e-27	42.20	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	5.2e-21	40.35	EXPRESSED IN: 18 plant structures	[more]

BLAST of CmaCh11G004260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086184\|ref\|XP_008443801.1\|	6.1e-56	71.20	PREDICTED: transcription factor bHLH147 [Cucumis melo]	[more]
gi\|449464326\|ref\|XP_004149880.1\|	1.8e-55	71.20	PREDICTED: transcription factor IBH1 [Cucumis sativus]	[more]
gi\|590580096\|ref\|XP_007013974.1\|	2.0e-38	44.81	Sequence-specific DNA binding transcription factors, putative [Theobroma cacao]	[more]
gi\|641843466\|gb\|KDO62366.1\|	7.2e-33	51.69	hypothetical protein CISIN_1g030032mg [Citrus sinensis]	[more]
gi\|567922968\|ref\|XP_006453490.1\|	7.2e-33	51.69	hypothetical protein CICLE_v10009640mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G004260.1	CmaCh11G004260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 8..218 score: 4.8
None	No IPR available	PANTHER	PTHR33124:SF5	BHLH TRANSCRIPTION FACTOR	coord: 8..218 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G004260	Cucsa.063690	Cucumber (Gy14) v1	cgycmaB0099
CmaCh11G004260	Cucsa.089810	Cucumber (Gy14) v1	cgycmaB0177
CmaCh11G004260	Cla018780	Watermelon (97103) v1	cmawmB143
CmaCh11G004260	Cla022864	Watermelon (97103) v1	cmawmB133
CmaCh11G004260	Csa1G294080	Cucumber (Chinese Long) v2	cmacuB104
CmaCh11G004260	Csa2G047790	Cucumber (Chinese Long) v2	cmacuB120
CmaCh11G004260	MELO3C010170	Melon (DHL92) v3.5.1	cmameB105
CmaCh11G004260	MELO3C004096	Melon (DHL92) v3.5.1	cmameB130
CmaCh11G004260	ClCG11G012600	Watermelon (Charleston Gray)	cmawcgB091
CmaCh11G004260	ClCG06G012890	Watermelon (Charleston Gray)	cmawcgB135
CmaCh11G004260	CSPI01G18260	Wild cucumber (PI 183967)	cmacpiB097
CmaCh11G004260	CSPI02G05530	Wild cucumber (PI 183967)	cmacpiB117
CmaCh11G004260	CmoCh10G004630	Cucurbita moschata (Rifu)	cmacmoB099
CmaCh11G004260	CmoCh11G004260	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G004260	Lsi11G007180	Bottle gourd (USVL1VR-Ls)	cmalsiB104
CmaCh11G004260	LsiUNG001040	Bottle gourd (USVL1VR-Ls)	cmalsiB082
CmaCh11G004260	Cp4.1LG18g05890	Cucurbita pepo (Zucchini)	cmacpeB132
CmaCh11G004260	Cp4.1LG04g12680	Cucurbita pepo (Zucchini)	cmacpeB153
CmaCh11G004260	MELO3C010170.2	Melon (DHL92) v3.6.1	cmamedB112
CmaCh11G004260	MELO3C004096.2	Melon (DHL92) v3.6.1	cmamedB142
CmaCh11G004260	CsaV3_2G007890	Cucumber (Chinese Long) v3	cmacucB0136
CmaCh11G004260	CsaV3_1G029460	Cucumber (Chinese Long) v3	cmacucB0111
CmaCh11G004260	Cla97C11G218460	Watermelon (97103) v2	cmawmbB097
CmaCh11G004260	Cla97C06G122170	Watermelon (97103) v2	cmawmbB139
CmaCh11G004260	Bhi02G000631	Wax gourd	cmawgoB0150
CmaCh11G004260	Bhi06G001184	Wax gourd	cmawgoB0098
CmaCh11G004260	CsGy2G005670	Cucumber (Gy14) v2	cgybcmaB164
CmaCh11G004260	CsGy1G018320	Cucumber (Gy14) v2	cgybcmaB039
CmaCh11G004260	Carg10025	Silver-seed gourd	carcmaB0169
CmaCh11G004260	Carg14055	Silver-seed gourd	carcmaB0710

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh11G004260	CmaCh10G004330	Cucurbita maxima (Rimu)	cmacmaB072

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G004260	Cucurbita pepo (Zucchini)	cmacpeB110
CmaCh11G004260	Cucurbita pepo (Zucchini)	cmacpeB163
CmaCh11G004260	Bottle gourd (USVL1VR-Ls)	cmalsiB148
CmaCh11G004260	Silver-seed gourd	carcmaB0073
CmaCh11G004260	Cucurbita maxima (Rimu)	cmacmaB168
CmaCh11G004260	Cucurbita moschata (Rifu)	cmacmoB160