CSPI01G18260 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G18260
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Sequence-specific DNA binding transcription factors, putative
Location	Chr1 : 13716648 .. 13717650 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCACTTATAAACTCTCTTGGATCTCTAAATCTTCTCCTTCTCTCTCAATTTTAACATTATAACACATTTCTCAGGTATGTTCAATTTTTTTTTCTCATTTTTTCATCAGATAATTCCATAGTCCTTTCTTATTTTTCTCTACACAACCCATTGAATTCTCTAGTTATTTATTTTTCTTATATTGTTATGATATCATCAGAATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGTCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGAAAAGAAAATTCAATTTTTAATTATAATCAATCCCCCCTTTTTTTTGTTTATTTATTTTCTTTTTTGGCCAACATTCATATGATGAATGTGGATGGAGAAAGTTATGGGCTTTTTTTCTCTCTTTTTTGCACATATATGTGTAGCTAATTTAATTTGAAGTTAATGTAGTGATAATTTGAAAACATTAATTATCTGAGTTTTATGTACATAATATATATATATCAATTGCTCTCTTCGTTGGT

mRNA sequence

ATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGTCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

Coding sequence (CDS)

ATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGTCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

Homology

[Close]

BLAST of CSPI01G18260 vs. TrEMBL
Match: A0A0A0LWQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 3.6e-93
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of CSPI01G18260 vs. TrEMBL
Match: A0A059CKR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00212 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.4e-33
Identity = 90/187 (48.13%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M +++S+KQ+F KKW+MGLQ+  ++ +NMT+ ER+ AIKLSAD+ALAS RNC TRWSRA+
Sbjct: 1   MHSASSIKQKFLKKWIMGLQLCNSSKKNMTIMERRKAIKLSADLALASVRNCTTRWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSW-------SSGKIVKRSRRVWR 120
           +A +S ++ +  +   ++G    +  K  +++ +  +S        +S KI+KRS  + R
Sbjct: 61  VASASQNDDNQALLQHIIGSDAAKHKK--ASIDVVANSTTSVAKKIASKKILKRSWGIRR 120

Query: 121 RRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDV 179
            R+  N  +     +IA+RLV+KRT++L+ LVPGGE MD ISLIEETLDYM  L+AQVDV
Sbjct: 121 VRKLSNGALKDPPYSIAKRLVKKRTQLLKNLVPGGESMDAISLIEETLDYMVWLRAQVDV 180

[Close]

BLAST of CSPI01G18260 vs. TrEMBL
Match: A0A0S3R7X0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G470100 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32
Identity = 88/178 (49.44%), Postives = 126/178 (70.79%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ + ++   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

[Close]

BLAST of CSPI01G18260 vs. TrEMBL
Match: A0A0L9TCY9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan541s001500 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-32
Identity = 88/178 (49.44%), Postives = 126/178 (70.79%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ + ++   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

[Close]

BLAST of CSPI01G18260 vs. TrEMBL
Match: V4UQX9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-32
Identity = 95/183 (51.91%), Postives = 136/183 (74.32%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+  +SLKQEF +KW++GLQI +++ ++M+++ERK AIKLSADIA+AS+RN  T WSRA+
Sbjct: 1   MRAPSSLKQEFLRKWILGLQICSSSAKSMSISERKKAIKLSADIAMASARNGRTSWSRAL 60

Query: 61  IARSSV-DNRSCLVANGVLGRGLCERVKQIS-NLKITRSSWSSGKIVKRSR-RVWRRRRR 120
           IA +S  DN   L    +LG   CER+ +IS ++K  R      KI+K+S   + RRR +
Sbjct: 61  IASASKDDNHGKLFVQQILGSD-CERLTKISTSIKRLRCK----KILKKSSGTIIRRRMK 120

Query: 121 R--NKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFL 179
           R  +K +A+ +IA+++V KRT++L+ LVPGG FMDE+SLIEETLDY+ +L+AQ+DVMR L
Sbjct: 121 RIPDKAVAS-SIAKQMVNKRTQILKSLVPGGVFMDEVSLIEETLDYILSLRAQIDVMRSL 177

[Close]

BLAST of CSPI01G18260 vs. TAIR10
Match: AT4G30410.2 (AT4G30410.2 sequence-specific DNA binding transcription factors)

HSP 1 Score: 121.7 bits (304), Expect = 4.8e-28
Identity = 77/179 (43.02%), Postives = 121/179 (67.60%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQ ++S+ +EF KKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA 179
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of CSPI01G18260 vs. TAIR10
Match: AT5G57780.1 (AT5G57780.1 EXPRESSED IN: 18 plant structures)

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-19
Identity = 74/181 (40.88%), Postives = 106/181 (58.56%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRA 60
           M   N +KQEF KKW+  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  VIARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRR---R 120
           +I+RS   N++   AN  + R                      +I+K++R   + R    
Sbjct: 62  LISRSG--NKT---ANKPMAR----------------------RILKKARNRMKNRCNIL 121

Query: 121 RRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFL 177
           RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +
Sbjct: 122 RRNGNFTAKT----WVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTV 151

[Close]

BLAST of CSPI01G18260 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 47.8 bits (112), Expect = 8.7e-06
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 1


Query: 90  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 149
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 150 FMDEISLIEETLDYMSALQAQVDVMRFLATAYNP 182
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

[Close]

BLAST of CSPI01G18260 vs. NCBI nr
Match: gi|449464326|ref|XP_004149880.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 5.2e-93
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of CSPI01G18260 vs. NCBI nr
Match: gi|659086184|ref|XP_008443801.1| (PREDICTED: transcription factor bHLH147 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 8.3e-91
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQN NSLKQEF KKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of CSPI01G18260 vs. NCBI nr
Match: gi|702289563|ref|XP_010047029.1| (PREDICTED: transcription factor IBH1 [Eucalyptus grandis])

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 90/187 (48.13%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M +++S+KQ+F KKW+MGLQ+  ++ +NMT+ ER+ AIKLSAD+ALAS RNC TRWSRA+
Sbjct: 1   MHSASSIKQKFLKKWIMGLQLCNSSKKNMTIMERRKAIKLSADLALASVRNCTTRWSRAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSW-------SSGKIVKRSRRVWR 120
           +A +S ++ +  +   ++G    +  K  +++ +  +S        +S KI+KRS  + R
Sbjct: 61  VASASQNDDNQALLQHIIGSDAAKHKK--ASIDVVANSTTSVAKKIASKKILKRSWGIRR 120

Query: 121 RRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDV 179
            R+  N  +     +IA+RLV+KRT++L+ LVPGGE MD ISLIEETLDYM  L+AQVDV
Sbjct: 121 VRKLSNGALKDPPYSIAKRLVKKRTQLLKNLVPGGESMDAISLIEETLDYMVWLRAQVDV 180

[Close]

BLAST of CSPI01G18260 vs. NCBI nr
Match: gi|698581812|ref|XP_009777650.1| (PREDICTED: uncharacterized protein LOC104227173 [Nicotiana sylvestris])

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 89/210 (42.38%), Postives = 135/210 (64.29%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N +SLKQEF KKW+ GLQI + T + M++ ERK AIKLSADIA+AS+R   T WS ++
Sbjct: 1   MRNPSSLKQEFLKKWIKGLQICSATKKKMSIIERKKAIKLSADIAMASTRKFTTYWSHSL 60

Query: 61  IARSSVDNRSCLVANGVLG------RGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRR 120
           +A +S D+ + ++ N +LG      R +  +   +  L +++      KIV +S ++ R+
Sbjct: 61  LANASKDDTNKIIINNILGNDDISKRSMIFKKSSMGLLAMSQKIIRCKKIVTKSCKISRQ 120

Query: 121 RRRRN-----------------KCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEE 180
           RR+ N                 K ++ ++IAR+LV+KRT++L+ L+PGGE+MD +SLI+E
Sbjct: 121 RRQLNFSPKQVEVGCTISRKGRKMISPISIARKLVKKRTQILKSLIPGGEYMDNVSLIKE 180

Query: 181 TLDYMSALQAQVDVMRFLATA---YNPSSS 185
           TLDY+ +L+ QVDVMR LA A    NP +S
Sbjct: 181 TLDYILSLRVQVDVMRHLANASEITNPKTS 210

[Close]

BLAST of CSPI01G18260 vs. NCBI nr
Match: gi|920681605|gb|KOM28392.1| (hypothetical protein LR48_Vigan541s001500 [Vigna angularis])

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 88/178 (49.44%), Postives = 126/178 (70.79%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ + ++   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

The following BLAST results are available for this feature:

BLAST of CSPI01G18260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G18260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ3_CUCSA	3.6e-93	99.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1	[more]
A0A059CKR1_EUCGR	9.4e-33	48.13	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00212 PE=4 SV=1	[more]
A0A0S3R7X0_PHAAN	1.2e-32	49.44	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G470100 PE=...	[more]
A0A0L9TCY9_PHAAN	1.2e-32	49.44	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan541s001500 PE=4 SV=1	[more]
V4UQX9_9ROSI	2.7e-32	51.91	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009640mg PE=4 SV=1	[more]

BLAST of CSPI01G18260 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30410.2	4.8e-28	43.02	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	4.0e-19	40.88	EXPRESSED IN: 18 plant structures	[more]
AT2G43060.1	8.7e-06	37.23	ILI1 binding bHLH 1	[more]

BLAST of CSPI01G18260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464326\|ref\|XP_004149880.1\|	5.2e-93	99.46	PREDICTED: transcription factor IBH1 [Cucumis sativus]	[more]
gi\|659086184\|ref\|XP_008443801.1\|	8.3e-91	97.30	PREDICTED: transcription factor bHLH147 [Cucumis melo]	[more]
gi\|702289563\|ref\|XP_010047029.1\|	1.3e-32	48.13	PREDICTED: transcription factor IBH1 [Eucalyptus grandis]	[more]
gi\|698581812\|ref\|XP_009777650.1\|	1.3e-32	42.38	PREDICTED: uncharacterized protein LOC104227173 [Nicotiana sylvestris]	[more]
gi\|920681605\|gb\|KOM28392.1\|	1.8e-32	49.44	hypothetical protein LR48_Vigan541s001500 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G18260.1	CSPI01G18260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 1..68 score: 9.8E-54coord: 91..181 score: 9.8
None	No IPR available	PANTHER	PTHR33124:SF5	BHLH TRANSCRIPTION FACTOR	coord: 1..68 score: 9.8E-54coord: 91..181 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G18260	Cla018780	Watermelon (97103) v1	cpiwmB086
CSPI01G18260	Cla022864	Watermelon (97103) v1	cpiwmB085
CSPI01G18260	Csa1G294080	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G18260	Csa2G047790	Cucumber (Chinese Long) v2	cpicuB014
CSPI01G18260	MELO3C010170	Melon (DHL92) v3.5.1	cpimeB057
CSPI01G18260	MELO3C004096	Melon (DHL92) v3.5.1	cpimeB075
CSPI01G18260	ClCG11G012600	Watermelon (Charleston Gray)	cpiwcgB014
CSPI01G18260	ClCG06G012890	Watermelon (Charleston Gray)	cpiwcgB071
CSPI01G18260	Lsi11G007180	Bottle gourd (USVL1VR-Ls)	cpilsiB010
CSPI01G18260	LsiUNG001040	Bottle gourd (USVL1VR-Ls)	cpilsiB000
CSPI01G18260	MELO3C010170.2	Melon (DHL92) v3.6.1	cpimedB051
CSPI01G18260	MELO3C004096.2	Melon (DHL92) v3.6.1	cpimedB067
CSPI01G18260	CsaV3_2G007890	Cucumber (Chinese Long) v3	cpicucB020
CSPI01G18260	CsaV3_1G029460	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G18260	Cla97C11G218460	Watermelon (97103) v2	cpiwmbB024
CSPI01G18260	Cla97C06G122170	Watermelon (97103) v2	cpiwmbB068
CSPI01G18260	Bhi06G001184	Wax gourd	cpiwgoB006
CSPI01G18260	Bhi02G000631	Wax gourd	cpiwgoB099
CSPI01G18260	Cucsa.063690	Cucumber (Gy14) v1	cgycpiB052
CSPI01G18260	Cucsa.089810	Cucumber (Gy14) v1	cgycpiB096
CSPI01G18260	CmaCh10G004330	Cucurbita maxima (Rimu)	cmacpiB059
CSPI01G18260	CmaCh11G004260	Cucurbita maxima (Rimu)	cmacpiB097
CSPI01G18260	CmoCh11G004260	Cucurbita moschata (Rifu)	cmocpiB090
CSPI01G18260	CmoCh10G004630	Cucurbita moschata (Rifu)	cmocpiB051
CSPI01G18260	Cp4.1LG18g05890	Cucurbita pepo (Zucchini)	cpecpiB351
CSPI01G18260	Cp4.1LG04g12680	Cucurbita pepo (Zucchini)	cpecpiB640
CSPI01G18260	CsGy1G018320	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G18260	CsGy2G005670	Cucumber (Gy14) v2	cgybcpiB050
CSPI01G18260	Carg14055	Silver-seed gourd	carcpiB0539
CSPI01G18260	Carg10025	Silver-seed gourd	carcpiB0138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI01G18260	CSPI02G05530	Wild cucumber (PI 183967)	cpicpiB006

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G18260	Bottle gourd (USVL1VR-Ls)	cpilsiB064