Carg14055 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14055
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor like
Location	Cucurbita_argyrosperma_scaffold_097 : 611982 .. 612509 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAATCCCAGTTCTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGTCAAGCGCTCATCGCCGCCACCTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTAATAACCCCAAAATTACGCGAATTATGTGGAGTAGTGGGAAGATTGTCAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGCAAGAAGCCGGCGGCGGAGTTGATTGCGAAGAAGTTGGTGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTTGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATAGCATCATCATCATGA

mRNA sequence

ATGCGAAATCCCAGTTCTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGTCAAGCGCTCATCGCCGCCACCTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTAATAACCCCAAAATTACGCGAATTATGTGGAGTAGTGGGAAGATTGTCAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGCAAGAAGCCGGCGGCGGAGTTGATTGCGAAGAAGTTGGTGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTTGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATAGCATCATCATCATGA

Coding sequence (CDS)

ATGCGAAATCCCAGTTCTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGCCATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGTCAAGCGCTCATCGCCGCCACCTCCGTTGACGACGGAAGCCGCCTCGTGGCCGATGTCCTTCTGGGCCGGACTAATAACCCCAAAATTACGCGAATTATGTGGAGTAGTGGGAAGATTGTCAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGCAAGAAGCCGGCGGCGGAGTTGATTGCGAAGAAGTTGGTGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGAAGAAACCCTTGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATAGCATCATCATCATGA

Protein sequence

MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

Homology

[Close]

BLAST of Carg14055 vs. NCBI nr
Match: XP_022933891.1 (transcription factor IBH1-like 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 1.2e-84
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL
Sbjct: 1   MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60

Query: 61  IAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAK 120
           IAATSVDDGSRLVADVLLGRT NPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAK
Sbjct: 61  IAATSVDDGSRLVADVLLGRTINPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAK 120

Query: 121 KLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS 176
           KLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Sbjct: 121 KLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS 175

[Close]

BLAST of Carg14055 vs. NCBI nr
Match: XP_023532012.1 (transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo] >XP_023532013.1 transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 1.5e-82
Identity = 169/175 (96.57%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSAD+ALASSRNCATRWSQAL
Sbjct: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADLALASSRNCATRWSQAL 60

Query: 61  IAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAK 120
           IAATSVDDGSRLVADVLLGRT NPKI+RIMWSSGKIVKRSRRVQRMRRK KKPAAELIA+
Sbjct: 61  IAATSVDDGSRLVADVLLGRTINPKISRIMWSSGKIVKRSRRVQRMRRKWKKPAAELIAR 120

Query: 121 KLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS 176
           KLVR+RRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Sbjct: 121 KLVRRRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS 175

[Close]

BLAST of Carg14055 vs. NCBI nr
Match: XP_022968867.1 (transcription factor IBH1-like 1 [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 3.4e-82
Identity = 169/175 (96.57%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL
Sbjct: 49  MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 108

Query: 61  IAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAK 120
           IAATSVDDGSRLVADVLLGRT NPKITRIMWSS KIVKRSRRVQRMRRKCKKPAAELIAK
Sbjct: 109 IAATSVDDGSRLVADVLLGRTTNPKITRIMWSSVKIVKRSRRVQRMRRKCKKPAAELIAK 168

Query: 121 KLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS 176
            L RKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI SSS
Sbjct: 169 TLARKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIPSSS 223

[Close]

BLAST of Carg14055 vs. NCBI nr
Match: XP_022988593.1 (transcription factor IBH1-like 1 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61
Identity = 136/183 (74.32%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MRNPSSLKR+FLKKW+MGL+IYTT+N+NMTV  RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MRNPSSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSSGKIVKRSRRVQRMRRKCKKP 120
           IA TSV DGS LVA+ LLGR        ++ KITR  WSSGKI+KRSRRV R R+KC+KP
Sbjct: 61  IAGTSVHDGSFLVANGLLGRAVCERIKQSSSKITRSSWSSGKILKRSRRVGR-RKKCRKP 120

Query: 121 AAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIA 176
           AAE IA++LV+KR + LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMRCLA TAY+A
Sbjct: 121 AAEWIARRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVA 180

[Close]

BLAST of Carg14055 vs. NCBI nr
Match: XP_022921880.1 (transcription factor IBH1-like 1 [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 5.3e-59
Identity = 134/183 (73.22%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MRNPS LKR+FLKKW MGL+IYTT+N+NMTV  RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MRNPSWLKRDFLKKWRMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSSGKIVKRSRRVQRMRRKCKKP 120
           IA TSV DGS LVA+ +LGR        ++ KITR  WSS KI+KRSRRV R R+KC+KP
Sbjct: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWSSRKILKRSRRVGR-RKKCRKP 120

Query: 121 AAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIA 176
           AAE IAK+LV+KR + LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMRCLA TAY+A
Sbjct: 121 AAEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVA 180

[Close]

BLAST of Carg14055 vs. TAIR10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           M+  SS+  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+AL
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAEL 120
           I  T+ +D     ++++ +      N K+ +      KIV+RS                 
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSXXXXXXXXXXXXXXXXX 120

Query: 121 IAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA 170
            AK+LV++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Sbjct: 121 XAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Carg14055 vs. TAIR10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures)

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKN-MTVTQRKNAIKLSADIALASSRNCATRWSQA 60
           M   + +K+EF+KKW+  L +  +S ++ + VT+RKNAI+LS+D+A+A++RN +T WS+A
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  LIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCK--KPAAEL 120
           LI+ +               +T N  + R      +I+K++R   RM+ +C   +     
Sbjct: 62  LISRSG-------------NKTANKPMAR------RILKKAR--NRMKNRCNILRRNGNF 121

Query: 121 IAKKLVRKRRKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRCLA 168
            AK  VRKR  +L+ LVPGGE +D+   LI ETLDYI  L+AQVDVMR +A
Sbjct: 122 TAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of Carg14055 vs. TAIR10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04
Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 0


Query: 23  TTSNK--NMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGR 82
           TTSN   +  V+     I+ +AD  LA+S    TRWS+A++A       SR+       R
Sbjct: 70  TTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILA-------SRV-------R 129

Query: 83  TNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM 142
               K  +   S+G    +SR+      + K PA E        ++ K+L  LVPG   +
Sbjct: 130 AKLKKHRKAKKSTGNC--KSRKGLTETNRIKLPAVE--------RKLKILGRLVPGCRKV 189

Query: 143 DEISLIEETLDYISALQAQVDVMRCLATAYIASS 175
              +L++E  DYI+AL+ QV  M  LA    A++
Sbjct: 190 SVPNLLDEATDYIAALEMQVRAMEALAELLTAAA 199

[Close]

BLAST of Carg14055 vs. TAIR10
Match: AT2G43060.1 (ILI1 binding bHLH 1)

HSP 1 Score: 41.2 bits (95), Expect = 7.7e-04
Identity = 36/104 (34.62%), Postives = 50/104 (48.08%), Query Frame = 0


Query: 63  ATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKL 122
           A +    SRL +  LL R +            KIV+ SRR  ++  K ++         +
Sbjct: 57  ARAAGGSSRLWSRALLRRADK--------DDNKIVRFSRRKWKISSKRRRSNQR---APV 116

Query: 123 VRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCL 167
           V +  + LR LVPGG  M+   L+EET  YI  L  QV VM+CL
Sbjct: 117 VEEAAERLRNLVPGGGGMETSKLMEETAHYIKCLSMQVKVMQCL 149

[Close]

BLAST of Carg14055 vs. Swiss-Prot
Match: sp|Q9M0B9|IBL1_ARATH (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-24
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           M+  SS+  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+AL
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAEL 120
           I  T+ +D     ++++ +      N K+ +      KIV+RS                 
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSXXXXXXXXXXXXXXXXX 120

Query: 121 IAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA 170
            AK+LV++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Sbjct: 121 XAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Carg14055 vs. TrEMBL
Match: tr|A0A0A0LWQ3|A0A0A0LWQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 133/184 (72.28%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           M+N +SLK+EF KKWMMGL+IYTT+N+NMTVT+RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAATSVDDGSRLVADVLLGR--------TNNPKITRIMWSSGKIVKRSRRV-QRMRRKCK 120
           IA +SVD+ S  VA+ +LGR         +N KITR  WSSGKIVKRSRRV +R RR+ K
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 KPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI 176
             AA  IA++LV+KR KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LATAY 
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

[Close]

BLAST of Carg14055 vs. TrEMBL
Match: tr|A0A1S3B8V1|A0A1S3B8V1_CUCME (uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55
Identity = 131/184 (71.20%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           M+NP+SLK+EFLKKWMMGL+IYTT+N+NMTV +RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAATSVDDGSRLVADVLLGR--------TNNPKITRIMWSSGKIVKRSRRVQRMRRKCKK 120
           IA +SVD+ S LVA+ +LGR         +N KITR  WSSGKIVKRSRRV R      K
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRXXXXNK 120

Query: 121 -PAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI 176
             AA  IA++LV++R KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LA+AY 
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

[Close]

BLAST of Carg14055 vs. TrEMBL
Match: tr|A0A2N9EMZ2|A0A2N9EMZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3841 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 102/186 (54.84%), Postives = 133/186 (71.51%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSN-KNMTVTQRKNAIKLSADIALASSRNCATRWSQA 60
           MR+PSSLK+EFLKKW+MGL+  T+S+ K MT+ +RK AIKLSAD+A+AS+RN  T WS+A
Sbjct: 1   MRHPSSLKQEFLKKWIMGLQRCTSSSKKTMTILERKKAIKLSADLAMASARNGTTCWSRA 60

Query: 61  LIAATSVDDGSRLVADVLLGRT--------------NNPKITRIMWSSGKIVKRSRRVQR 120
           LIA  S D  SR++A+ +LG                NN +I      S KI+KRS  V+R
Sbjct: 61  LIANASRDHDSRILAEKILGPESESLKKASTMSLIFNNRRI-----RSKKILKRSCSVRR 120

Query: 121 MRRKC--KKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVM 170
           +R+    +K  A  IAK+LV+KR  +L+ LVPGGE+MDEISLIEETLDYI+ L+AQVDVM
Sbjct: 121 VRKSLPHQKVFANSIAKRLVKKRTHILKSLVPGGEYMDEISLIEETLDYIAYLRAQVDVM 180

[Close]

BLAST of Carg14055 vs. TrEMBL
Match: tr|A0A2C9ULV2|A0A2C9ULV2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G147700 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-36
Identity = 90/171 (52.63%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60
           MR P SLK+EFLKKWM+GL++  ++N+NM++ +RK AIKLSADIA+AS+RN  T WS+AL
Sbjct: 1   MRAPQSLKQEFLKKWMVGLQLCESTNQNMSILERKKAIKLSADIAMASTRNGMTCWSRAL 60

Query: 61  IAATSVDDGSRLVADVLLGRTNNPKI--TRIMWSSGKIVKRSRRVQRMRRKCKKPAAELI 120
           +A TS D G++++ D +L  + + K+   R +    KI+++S R ++ R    +  A  +
Sbjct: 61  VAKTSTDFGNKVLVDNILLASQSEKLKNKRTIIRRKKILRKSHRARKARG--GRVVARSL 120

Query: 121 AKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATA 170
           AK++V+KR +VL+ LVPGGEFMD++SLIEETLDYI +L+AQVDVMR LA A
Sbjct: 121 AKEMVKKRTQVLKSLVPGGEFMDDVSLIEETLDYIVSLRAQVDVMRTLAKA 169

[Close]

BLAST of Carg14055 vs. TrEMBL
Match: tr|A0A2I4FH84|A0A2I4FH84_9ROSI (transcription factor bHLH147-like OS=Juglans regia OX=51240 GN=LOC108998786 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 97/187 (51.87%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 1   MRNPSSLKREFLKKWMMGLEIYTTSN-KNMTVTQRKNAIKLSADIALASSRNCATRWSQA 60
           MR+PSSLK+EFLK+WM GL+  T+S+ K+M   +RK  IKLSAD+A+AS+RN  T WS+A
Sbjct: 1   MRSPSSLKQEFLKRWMRGLQRCTSSSKKDMNTLERKKVIKLSADLAMASARNGKTSWSRA 60

Query: 61  LIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSG-----------KIVKRS-RRVQRMR 120
           LI   S D+ +R++A+ +LG  ++  I R+  S G           KI+KRS   V+R+R
Sbjct: 61  LIDNASGDNDNRILAERILGPESDILIKRVSTSVGTVSCNRKIRSKKILKRSCNSVRRVR 120

Query: 121 RKCKKP-----AAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDV 170
           +    P      A+ IAK+LV+KR ++L+ LVPGGEFMDE+SLIEETLDYI+ L+AQVDV
Sbjct: 121 KATHLPHHQNVLAKSIAKRLVQKRTQILKRLVPGGEFMDELSLIEETLDYIAYLRAQVDV 180

The following BLAST results are available for this feature:

BLAST of Carg14055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933891.1	1.2e-84	98.86	transcription factor IBH1-like 1 isoform X2 [Cucurbita moschata]	[more]
XP_023532012.1	1.5e-82	96.57	transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo] >XP_023532013.1 tr...	[more]
XP_022968867.1	3.4e-82	96.57	transcription factor IBH1-like 1 [Cucurbita maxima]	[more]
XP_022988593.1	4.3e-61	74.32	transcription factor IBH1-like 1 [Cucurbita maxima]	[more]
XP_022921880.1	5.3e-59	73.22	transcription factor IBH1-like 1 [Cucurbita moschata]	[more]

BLAST of Carg14055 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30410.2	3.5e-25	41.62	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	2.6e-20	40.35	EXPRESSED IN: 18 plant structures	[more]
AT1G09250.1	5.9e-04	31.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G43060.1	7.7e-04	34.62	ILI1 binding bHLH 1	[more]

BLAST of Carg14055 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M0B9\|IBL1_ARATH	6.4e-24	41.62	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]

BLAST of Carg14055 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWQ3\|A0A0A0LWQ3_CUCSA	1.6e-56	72.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1	[more]
tr\|A0A1S3B8V1\|A0A1S3B8V1_CUCME	1.8e-55	71.20	uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=...	[more]
tr\|A0A2N9EMZ2\|A0A2N9EMZ2_FAGSY	1.1e-36	54.84	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3841 PE=4 SV=1	[more]
tr\|A0A2C9ULV2\|A0A2C9ULV2_MANES	5.4e-36	52.63	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G147700 PE=4 SV=...	[more]
tr\|A0A2I4FH84\|A0A2I4FH84_9ROSI	1.3e-34	51.87	transcription factor bHLH147-like OS=Juglans regia OX=51240 GN=LOC108998786 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14055-RA	Carg14055-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 6..169
None	No IPR available	PANTHER	PTHR33124:SF5	SUBFAMILY NOT NAMED	coord: 6..169
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 107..156 score: 8.607

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14055	Cla022864	Watermelon (97103) v1	carwmB0506
Carg14055	Cla018780	Watermelon (97103) v1	carwmB0507
Carg14055	Csa1G294080	Cucumber (Chinese Long) v2	carcuB0531
Carg14055	Csa2G047790	Cucumber (Chinese Long) v2	carcuB0533
Carg14055	MELO3C004096	Melon (DHL92) v3.5.1	carmeB0511
Carg14055	MELO3C010170	Melon (DHL92) v3.5.1	carmeB0509
Carg14055	ClCG06G012890	Watermelon (Charleston Gray)	carwcgB0496
Carg14055	ClCG11G012600	Watermelon (Charleston Gray)	carwcgB0491
Carg14055	CSPI02G05530	Wild cucumber (PI 183967)	carcpiB0540
Carg14055	CSPI01G18260	Wild cucumber (PI 183967)	carcpiB0539
Carg14055	Cucsa.063690	Cucumber (Gy14) v1	carcgyB0577
Carg14055	Cucsa.089810	Cucumber (Gy14) v1	carcgyB0578
Carg14055	CmaCh10G004330	Cucurbita maxima (Rimu)	carcmaB0709
Carg14055	CmaCh11G004260	Cucurbita maxima (Rimu)	carcmaB0710
Carg14055	CmoCh10G004630	Cucurbita moschata (Rifu)	carcmoB0688
Carg14055	CmoCh11G004260	Cucurbita moschata (Rifu)	carcmoB0689
Carg14055	LsiUNG001040	Bottle gourd (USVL1VR-Ls)	carlsiB455
Carg14055	Lsi11G007180	Bottle gourd (USVL1VR-Ls)	carlsiB459
Carg14055	Cp4.1LG18g05890	Cucurbita pepo (Zucchini)	carcpeB0715
Carg14055	Cp4.1LG04g12680	Cucurbita pepo (Zucchini)	carcpeB0717
Carg14055	CsGy2G005670	Cucumber (Gy14) v2	carcgybB0510
Carg14055	CsGy1G018320	Cucumber (Gy14) v2	carcgybB0508
Carg14055	MELO3C010170.2	Melon (DHL92) v3.6.1	carmedB0515
Carg14055	MELO3C004096.2	Melon (DHL92) v3.6.1	carmedB0517
Carg14055	CsaV3_2G007890	Cucumber (Chinese Long) v3	carcucB0538
Carg14055	CsaV3_1G029460	Cucumber (Chinese Long) v3	carcucB0537
Carg14055	Cla97C11G218460	Watermelon (97103) v2	carwmbB0530
Carg14055	Cla97C06G122170	Watermelon (97103) v2	carwmbB0534
Carg14055	Bhi06G001184	Wax gourd	carwgoB0616
Carg14055	Bhi02G000631	Wax gourd	carwgoB0620

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14055	Carg10025	Silver-seed gourd	carcarB151

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14055	Bottle gourd (USVL1VR-Ls)	carlsiB463