Cucsa.063690 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.063690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Sequence-specific DNA binding transcription factors, putative
Location	scaffold00674 : 92117 .. 92887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAATCTTCTCCTTCTCTCTCAATTTTAACATTATAACACATTTCTCAGGTATGTTCAATTTTTTTTtCTCATTTTTTCATCAGATAATTCCATAGTCCTTTCTTATTTTTCTCTACACAACCCATTGAATTCTCTAGTTATTTATTTTTCTTATATTGTTATGATATCATCAGAATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTtAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTTGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAaGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGAAAAGAAAATTCAATTTTTAATTATAATCAATCCCCC

mRNA sequence

TCTAAATCTTCTCCTTCTCTCTCAATTTTAACATTATAACACATTTCTCAGAATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTTGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGAAAAGAAAATTCAATTTTTAATTATAATCAATCCCCC

Coding sequence (CDS)

ATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTtAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTTGTGGCTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAaGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

Protein sequence

MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS*

Homology

[Close]

BLAST of Cucsa.063690 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 1


Query: 90  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 149
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 150 FMDEISLIEETLDYMSALQAQVDVMRFLATAYNP 182
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

[Close]

BLAST of Cucsa.063690 vs. TrEMBL
Match: A0A0A0LWQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.2e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Cucsa.063690 vs. TrEMBL
Match: A0A059CKR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00212 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.9e-36
Identity = 90/187 (48.13%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M +++S+KQ+F KKW+MGLQ+  ++ +NMT+ ER+ AIKLSAD+ALAS RNC TRWSRA+
Sbjct: 1   MHSASSIKQKFLKKWIMGLQLCNSSKKNMTIMERRKAIKLSADLALASVRNCTTRWSRAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW-------SSGKIVKRSRRVWR 120
           +A +S ++ +  +   ++G    +  K  +++ +  +S        +S KI+KRS  + R
Sbjct: 61  VASASQNDDNQALLQHIIGSDAAKHKK--ASIDVVANSTTSVAKKIASKKILKRSWGIRR 120

Query: 121 RRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDV 179
            R+  N  +     +IA+RLV+KRT++L+ LVPGGE MD ISLIEETLDYM  L+AQVDV
Sbjct: 121 VRKLSNGALKDPPYSIAKRLVKKRTQLLKNLVPGGESMDAISLIEETLDYMVWLRAQVDV 180

[Close]

BLAST of Cucsa.063690 vs. TrEMBL
Match: A0A0S3R7X0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G470100 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-35
Identity = 88/178 (49.44%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ +  +   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

[Close]

BLAST of Cucsa.063690 vs. TrEMBL
Match: A0A0L9TCY9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan541s001500 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-35
Identity = 88/178 (49.44%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ +  +   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

[Close]

BLAST of Cucsa.063690 vs. TrEMBL
Match: F6HYP3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01230 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-35
Identity = 88/179 (49.16%), Postives = 127/179 (70.95%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+   SLK+EF KKW+MGLQ+ +++ + M+  ERK AIKLSAD+A+AS+RN  TRWSRA+
Sbjct: 1   MRPPTSLKKEFLKKWIMGLQLCSSSKKEMSFLERKKAIKLSADVAMASARNATTRWSRAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQIS-NLKITRSSWSSGKIVKRSRRVWRRRRRRN 120
           I+ +S D+ +  +   +LG    E +K+ S +L +      S KI+++S  + R R+  +
Sbjct: 61  ISNASKDDSNKGLVECILGPE-SESLKRASMSLVLCNKRNRSKKILRKSCSIRRARKSSS 120

Query: 121 KCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
           + + A +IA+RLV+KRT+VL+ LVPGG  M E SLIEETLDY+ +L+AQVDVMR LA A
Sbjct: 121 QMVMASSIAKRLVKKRTQVLKSLVPGGGSMSEFSLIEETLDYILSLRAQVDVMRHLANA 178

[Close]

BLAST of Cucsa.063690 vs. TAIR10
Match: AT4G30410.2 (AT4G30410.2 sequence-specific DNA binding transcription factors)

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31
Identity = 77/179 (43.02%), Postives = 122/179 (68.16%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQ ++S+ +EF KKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           I +++ ++   F+   +L  G+  + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATEDN--FLVRQMLS-GI--KAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA 179
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Cucsa.063690 vs. TAIR10
Match: AT5G57780.1 (AT5G57780.1 EXPRESSED IN: 18 plant structures)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 74/181 (40.88%), Postives = 106/181 (58.56%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRA 60
           M   N +KQEF KKW+  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  VIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRR---R 120
           +I+RS   N++   AN  + R                      +I+K++R   + R    
Sbjct: 62  LISRSG--NKT---ANKPMAR----------------------RILKKARNRMKNRCNIL 121

Query: 121 RRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFL 177
           RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +
Sbjct: 122 RRNGNFTAKT----WVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTV 151

[Close]

BLAST of Cucsa.063690 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 1


Query: 90  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 149
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 150 FMDEISLIEETLDYMSALQAQVDVMRFLATAYNP 182
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

[Close]

BLAST of Cucsa.063690 vs. NCBI nr
Match: gi|449464326|ref|XP_004149880.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 4.5e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Cucsa.063690 vs. NCBI nr
Match: gi|659086184|ref|XP_008443801.1| (PREDICTED: transcription factor bHLH147 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.0e-93
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           MQN NSLKQEF KKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 181 PSSSS 186
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Cucsa.063690 vs. NCBI nr
Match: gi|702289563|ref|XP_010047029.1| (PREDICTED: transcription factor IBH1 [Eucalyptus grandis])

HSP 1 Score: 158.7 bits (400), Expect = 9.9e-36
Identity = 90/187 (48.13%), Postives = 130/187 (69.52%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M +++S+KQ+F KKW+MGLQ+  ++ +NMT+ ER+ AIKLSAD+ALAS RNC TRWSRA+
Sbjct: 1   MHSASSIKQKFLKKWIMGLQLCNSSKKNMTIMERRKAIKLSADLALASVRNCTTRWSRAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW-------SSGKIVKRSRRVWR 120
           +A +S ++ +  +   ++G    +  K  +++ +  +S        +S KI+KRS  + R
Sbjct: 61  VASASQNDDNQALLQHIIGSDAAKHKK--ASIDVVANSTTSVAKKIASKKILKRSWGIRR 120

Query: 121 RRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDV 179
            R+  N  +     +IA+RLV+KRT++L+ LVPGGE MD ISLIEETLDYM  L+AQVDV
Sbjct: 121 VRKLSNGALKDPPYSIAKRLVKKRTQLLKNLVPGGESMDAISLIEETLDYMVWLRAQVDV 180

[Close]

BLAST of Cucsa.063690 vs. NCBI nr
Match: gi|698581812|ref|XP_009777650.1| (PREDICTED: uncharacterized protein LOC104227173 [Nicotiana sylvestris])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 89/210 (42.38%), Postives = 134/210 (63.81%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N +SLKQEF KKW+ GLQI + T + M++ ERK AIKLSADIA+AS+R   T WS ++
Sbjct: 1   MRNPSSLKQEFLKKWIKGLQICSATKKKMSIIERKKAIKLSADIAMASTRKFTTYWSHSL 60

Query: 61  IARSSVDNRSCFVANGVLG------RGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRR 120
           +A +S D+ +  + N +LG      R +  +   +  L +++      KIV +S ++ R+
Sbjct: 61  LANASKDDTNKIIINNILGNDDISKRSMIFKKSSMGLLAMSQKIIRCKKIVTKSCKISRQ 120

Query: 121 RRRRN-----------------KCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEE 180
           RR+ N                 K ++ ++IAR+LV+KRT++L+ L+PGGE+MD +SLI+E
Sbjct: 121 RRQLNFSPKQVEVGCTISRKGRKMISPISIARKLVKKRTQILKSLIPGGEYMDNVSLIKE 180

Query: 181 TLDYMSALQAQVDVMRFLATA---YNPSSS 185
           TLDY+ +L+ QVDVMR LA A    NP +S
Sbjct: 181 TLDYILSLRVQVDVMRHLANASEITNPKTS 210

[Close]

BLAST of Cucsa.063690 vs. NCBI nr
Match: gi|920681605|gb|KOM28392.1| (hypothetical protein LR48_Vigan541s001500 [Vigna angularis])

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-35
Identity = 88/178 (49.44%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60
           M+N N++KQEF KKW+ GL+ Y +  +NM++ ERK AIKLSAD+A+AS+RN  TRWS+A+
Sbjct: 1   MRNINTVKQEFLKKWIWGLRKYRSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKAL 60

Query: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120
           IA +S ++ +  +   VLG     R K  +N   +R   S  K ++R+R V   + R   
Sbjct: 61  IANASKNSNNKVLTEHVLGSSPPVR-KSSTNYSHSRRIRSCRKSLRRNRAVHIPKDR--- 120

Query: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATA 179
            + A  IAR+LVQKRT+ L+ L+PGGEFMD++SL+EETLDY+ +L+AQV+VMR L TA
Sbjct: 121 -VVASFIARKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVQSLRAQVEVMRCLVTA 173

The following BLAST results are available for this feature:

BLAST of Cucsa.063690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IBH1_ARATH	3.7e-06	37.23	Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1	[more]

BLAST of Cucsa.063690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ3_CUCSA	3.2e-97	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294080 PE=4 SV=1	[more]
A0A059CKR1_EUCGR	6.9e-36	48.13	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00212 PE=4 SV=1	[more]
A0A0S3R7X0_PHAAN	2.0e-35	49.44	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G470100 PE=...	[more]
A0A0L9TCY9_PHAAN	2.0e-35	49.44	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan541s001500 PE=4 SV=1	[more]
F6HYP3_VITVI	2.6e-35	49.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01230 PE=4 SV=...	[more]

BLAST of Cucsa.063690 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30410.2	1.6e-31	43.02	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	3.0e-22	40.88	EXPRESSED IN: 18 plant structures	[more]
AT2G43060.1	2.1e-07	37.23	ILI1 binding bHLH 1	[more]

BLAST of Cucsa.063690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464326\|ref\|XP_004149880.1\|	4.5e-97	100.00	PREDICTED: transcription factor IBH1 [Cucumis sativus]	[more]
gi\|659086184\|ref\|XP_008443801.1\|	1.0e-93	96.76	PREDICTED: transcription factor bHLH147 [Cucumis melo]	[more]
gi\|702289563\|ref\|XP_010047029.1\|	9.9e-36	48.13	PREDICTED: transcription factor IBH1 [Eucalyptus grandis]	[more]
gi\|698581812\|ref\|XP_009777650.1\|	1.3e-35	42.38	PREDICTED: uncharacterized protein LOC104227173 [Nicotiana sylvestris]	[more]
gi\|920681605\|gb\|KOM28392.1\|	2.9e-35	49.44	hypothetical protein LR48_Vigan541s001500 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.063690.1	Cucsa.063690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 1..68 score: 7.4E-54coord: 91..181 score: 7.4
None	No IPR available	PANTHER	PTHR33124:SF5	BHLH TRANSCRIPTION FACTOR	coord: 1..68 score: 7.4E-54coord: 91..181 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.063690	Cla018780	Watermelon (97103) v1	cgywmB058
Cucsa.063690	Csa1G294080	Cucumber (Chinese Long) v2	cgycuB052
Cucsa.063690	MELO3C010170	Melon (DHL92) v3.5.1	cgymeB057
Cucsa.063690	ClCG06G012890	Watermelon (Charleston Gray)	cgywcgB058
Cucsa.063690	CSPI01G18260	Wild cucumber (PI 183967)	cgycpiB052
Cucsa.063690	CmaCh10G004330	Cucurbita maxima (Rimu)	cgycmaB0098
Cucsa.063690	CmaCh11G004260	Cucurbita maxima (Rimu)	cgycmaB0099
Cucsa.063690	CmoCh11G004260	Cucurbita moschata (Rifu)	cgycmoB0094
Cucsa.063690	CmoCh10G004630	Cucurbita moschata (Rifu)	cgycmoB0093
Cucsa.063690	LsiUNG001040	Bottle gourd (USVL1VR-Ls)	cgylsiB056
Cucsa.063690	Cp4.1LG04g12680	Cucurbita pepo (Zucchini)	cgycpeB0094
Cucsa.063690	Cp4.1LG18g05890	Cucurbita pepo (Zucchini)	cgycpeB0093
Cucsa.063690	MELO3C010170.2	Melon (DHL92) v3.6.1	cgymedB055
Cucsa.063690	CsaV3_1G029460	Cucumber (Chinese Long) v3	cgycucB054
Cucsa.063690	Cla97C06G122170	Watermelon (97103) v2	cgywmbB057
Cucsa.063690	Bhi02G000631	Wax gourd	cgywgoB061
Cucsa.063690	Carg14055	Silver-seed gourd	carcgyB0577

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None