CmaCh09G012370 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_1
Location	Cma_Chr09 : 8262104 .. 8264466 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTGACCCAACTCCCTCCAATCCACATTTAGGAAAGAACTTGACGGAAAATCCGCCATTATCAACCTTTCCCGGTTTCCTTCTGGAGATATCCCAACCAATTCATTCTCCTCCAAGACGTTGCAGAGATCGGGGAAGGGATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTCCTTCCTTTTCTCTCTTTCTCTCCATTCTCTTTCAGGTACAAATCCCTCTTTTCGCTTTACAACTTCTCTGAATCCGGCAGCTAAATCGGGATGAATTTCTTGATGATTTGTATCTATGATGATTGTTTTTCGCTTTTTCTATTGAATTTTTTGTCTCAATACTGGAGGATTTTTGCTTTTGCGGTAGCATTATTCTGCGTAATGATTTAGGGAATTGTTTTTTTTTTAAATTTTTTTTTATGATATATAGCATTTGAATAGAAATAATCAAAGAGAGATGAATCGAGAATTTCATTGCAATTTCTTCGAATATTACTTCATTTTCCCCCATTTTTTGCCTCTTTGTTCTGTATTTGTGTTTCTTGAGGAGACATTGAAATCCTGATACTTTAATTCCAATGAATTCCAATTTGAATGTGTTTTGTAGACCTCGAATTCTCGTTGAATGAACAGAGGATTTTTCTGGTTTTTGGTTTTTGTTGTGTTTATAGTGTTGGCAGATGAGCATTCAAGTGCTGAACATGGTGATGGTAAAGCTAAAAAGGGCGATGGTTGGAGGAGCCGATCGATGGGGATCAAGATAGTACTCATATGTCTAGGAGTGGTAACTGTGCTTGCCTTTTCTGTGATTCTATGCAAGATATGGCAAAGGAAGAAAAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAACTCGAACTCGGCCTTCGAGATTGAGCTCCACGATACTCATCCGTCCGTTCTCAATATTCGACTAACTAAGAGGAGGTGCACATTGTTGATTCCTTTGCCTTTTGTTTAATGATGTATACAAGCTTTTTGATCTTATCCTATTTTGTTTTTGGATGAACTGAGCTCGTTAAATCGTAGCAAATTTTTTCGTGTCAACTAGTTTTGAATAAGTTGTTTCTCCTTCAATCTTTCATGATATCTGAGGCATGTCTCAAATATCAATCATTGTTTAGTGAATTGGTTCCATTGGTAAATACATGTTCAATTTTTCTATGGGCTGAGTAATTGTGATTGAGAGTACATGCTGCTGAGCTAGGCCATGTTCTGAAGAATGAGAAGATTTTCATTTTCAAAATGGATGTATATAATGTAGCGAGCGATACTATAGATTTCCATTGTTTGAGAACTTTGATTTTCATGCATAATCGCTCAAGCTCACCGTTAGTAGAAATTGTCCATTTTAGGTTTTTCCTTGAGGGGGCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTTACTAGGGAGAGGTTTTTACTAACAGATGTGGGATCTTACAACCCACCCCCTTTGGGGTCTAGCGTCCTTGCTGGCACTCGTACCCTTCTTCAATTGATGTGGGACCCCCAATCCAACCCTCTTCGGGACCCAGTGTCCTTGTGCTAACACATCGCCTTGTGTCCACCCCCTCGCCTAGTGTCTAACTCTGATACCATTTGTAACAGCTCAAGCTCACAGCTAGCAAATAGTGTCCTCTTTGGACTTTCCCTTTTGAGCTTCACCGCTAGTAAATATTGTCTTTTTTGGGTTTCTCTTTCGAGCTTCATGATCAAGATTCTGAAGAAAAATTTGAATTTCACTATTTCGGTATCTGATAGTAATAAATAGTTACAACAGTGTGAACCGAAACTTTAGAGATGTAAACCTGTTAGATAACATTAGTTACCTTTTGATGCAGAGATTGTAAAGCTATTACAGATATAAGCCAATAGGAGGCTGCCAAGTTGACTTTCATGATACTTTGTCAAACTTATACCTAATTGTATTTTCTTATGCGTTGAAGAAGGCTGCTCCATTGATGAGAAACTGTCAAAGCCATCTGATTTTTGTTTTTTATTGACACTAAGTTTGTAGCCTTCAGTATCTATTAGTATAAGAAAAGTTTGAGGAGGTTGGTTTGAAAGTTGAAAAGTTCAAACCTACCAAATAGATTTCCTTTTGAAAGTAATATATTTTGACCTCTGACTTTTCTGAACATGTAAAGCTTTTCTGCAGAAGAAATTTTCAGCCAAGAAGTTTGGTCCTTTGTGAAGCAGGTACTGATGACTTTAAAGCTAGTTCATATGATTGTTCTTAGGTAAAAAAATATTCTTCGATCTTTTATGCTCATTCATGTAACAAATAACTTCAAATTTGTAATAATTTCTTTT

mRNA sequence

CGCTGACCCAACTCCCTCCAATCCACATTTAGGAAAGAACTTGACGGAAAATCCGCCATTATCAACCTTTCCCGGTTTCCTTCTGGAGATATCCCAACCAATTCATTCTCCTCCAAGACGTTGCAGAGATCGGGGAAGGGATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTCCTTCCTTTTCTCTCTTTCTCTCCATTCTCTTTCAGTGTTGGCAGATGAGCATTCAAGTGCTGAACATGGTGATGGTAAAGCTAAAAAGGGCGATGGTTGGAGGAGCCGATCGATGGGGATCAAGATAGTACTCATATGTCTAGGAGTGGTAACTGTGCTTGCCTTTTCTGTGATTCTATGCAAGATATGGCAAAGGAAGAAAAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAACTCGAACTCGGCCTTCGAGATTGAGCTCCACGATACTCATCCGTCCGTTCTCAATATTCGACTAACTAAGAGGAGCTTTTCTGCAGAAGAAATTTTCAGCCAAGAAGTTTGGTCCTTTGTGAAGCAGGTACTGATGACTTTAAAGCTAGTTCATATGATTGTTCTTAGGTAAAAAAATATTCTTCGATCTTTTATGCTCATTCATGTAACAAATAACTTCAAATTTGTAATAATTTCTTTT

Coding sequence (CDS)

ATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTCCTTCCTTTTCTCTCTTTCTCTCCATTCTCTTTCAGTGTTGGCAGATGAGCATTCAAGTGCTGAACATGGTGATGGTAAAGCTAAAAAGGGCGATGGTTGGAGGAGCCGATCGATGGGGATCAAGATAGTACTCATATGTCTAGGAGTGGTAACTGTGCTTGCCTTTTCTGTGATTCTATGCAAGATATGGCAAAGGAAGAAAAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAACTCGAACTCGGCCTTCGAGATTGA

Protein sequence

MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD

Homology

[Close]

BLAST of CmaCh09G012370 vs. TrEMBL
Match: A0A0A0KXZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650624 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-31
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLI 60
           MS SQSSRSLQFL F+FS +  HSLSVLA E+SSA+ G GK KK D  RS SMGIKI++I
Sbjct: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDG-GKTKKDDARRSPSMGIKILII 60

Query: 61  CLGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           CLGVVTV+ FSVIL KIWQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Sbjct: 61  CLGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of CmaCh09G012370 vs. TrEMBL
Match: W9RQG1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011638 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLIC 60
           M+     RS QF S LFSL +  +S +A   +S E  + K+++    ++ S GIK+V++C
Sbjct: 1   MTSFHGRRSEQFSSLLFSLLILFVSGIAG--ASGEPSNSKSER----KASSAGIKVVIVC 60

Query: 61  LGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           LG+V V+ FSV L K+WQ+KKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 61  LGLVAVIGFSVFLFKLWQKKKREEQHARLLKLFEDDDELEVELGIRD 101

[Close]

BLAST of CmaCh09G012370 vs. TrEMBL
Match: B9IQD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10570g PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-17
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 1


Query: 9   SLQ-FLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVL 68
           SLQ F+ F  S+SLH LS LA + ++ +  +  A         S+GIK+V+ CL VV ++
Sbjct: 9   SLQIFVIFFLSISLHLLSGLASDPANPKDTNKPASHSKS----SVGIKVVIACLSVVAII 68

Query: 69  AFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
            F+++L KIWQ+KKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 69  GFTMLLIKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 104

[Close]

BLAST of CmaCh09G012370 vs. TrEMBL
Match: A0A0B2NP95_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022254 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-17
Identity = 62/102 (60.78%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 8   RSLQF--LSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVT 67
           RSLQ+  L  L SL L  LS L D + S    + K       RS S+G+KI++I LGVVT
Sbjct: 6   RSLQYPLLLALTSLHLQHLSGL-DNNPSGAKNENKDVNHHASRS-SVGLKIIIIFLGVVT 65

Query: 68  VLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           V+AF V L K+WQRKKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 66  VIAFCVFLFKLWQRKKREEQHARLLKLFEDDDELEVELGMRD 105

[Close]

BLAST of CmaCh09G012370 vs. TrEMBL
Match: I1KW74_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G237900 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-17
Identity = 62/102 (60.78%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 8   RSLQF--LSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVT 67
           RSLQ+  L  L SL L  LS L D + S    + K       RS S+G+KI++I LGVVT
Sbjct: 6   RSLQYPLLLALTSLHLQHLSGL-DNNPSGAKNENKDVNHHASRS-SVGLKIIIIFLGVVT 65

Query: 68  VLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           V+AF V L K+WQRKKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 66  VIAFCVFLFKLWQRKKREEQHARLLKLFEDDDELEVELGMRD 105

[Close]

BLAST of CmaCh09G012370 vs. TAIR10
Match: AT1G09645.1 (AT1G09645.1 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLIC 60
           M ++ ++  L +   LF  S+  L         +++ +   K      S   G K++L+ 
Sbjct: 1   MRQNSATGGLSWRRLLFFASI-GLQFFLGLSGDSKNTNAGVKTESHTSSSKTGTKVILVL 60

Query: 61  LGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           +G V V  FS  L K+WQ+KKR+EQ+ARLLKLFE+DDELE+ELGLRD
Sbjct: 61  VGFVAVAMFSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 106

[Close]

BLAST of CmaCh09G012370 vs. TAIR10
Match: AT1G57765.2 (AT1G57765.2 unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 3.2e-13
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 1


Query: 12  FLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVLAFSV 71
           FL+ L+  S++   +  D +SS+      AK      S   G K++ I LG   V   S 
Sbjct: 27  FLAMLYLDSVYQC-ISGDPNSSSTG----AKAESHTSSSKTGTKVIFILLGFGAVAGLSF 86

Query: 72  ILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
            L K+WQ+KKR+EQ+ARLLKLFE+DDELE+ELGLRD
Sbjct: 87  FLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of CmaCh09G012370 vs. TAIR10
Match: AT3G53490.1 (AT3G53490.1 unknown protein)

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06
Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 1


Query: 32  SSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVLAFSVILCKIWQRKKREEQHARLLK 91
           S+ E G  K ++  G     + + IV++ LGVV V    ++  K W++KKR+++ AR LK
Sbjct: 151 SNKESGTEKEEQKGGMHP-GIVVLIVVLLLGVVAVGL--LVGYKYWRKKKRQQEQARFLK 210

Query: 92  LFEDDDELELELGLRD 108
           LFED D++E ELGL +
Sbjct: 211 LFEDGDDIEDELGLEN 223

[Close]

BLAST of CmaCh09G012370 vs. NCBI nr
Match: gi|659119434|ref|XP_008459655.1| (PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-32
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLI 60
           MS SQSSRSLQFL FLF+ + LHSLSVLA+++SSA+ G GK KK D  RS SMGIKI++I
Sbjct: 1   MSGSQSSRSLQFLFFLFNFIFLHSLSVLANDNSSAKDG-GKTKKDDVRRSPSMGIKILII 60

Query: 61  CLGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           CLGVVTV+AFSVIL KIWQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Sbjct: 61  CLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of CmaCh09G012370 vs. NCBI nr
Match: gi|449447605|ref|XP_004141558.1| (PREDICTED: uncharacterized protein LOC101207831 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-31
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLI 60
           MS SQSSRSLQFL F+FS +  HSLSVLA E+SSA+ G GK KK D  RS SMGIKI++I
Sbjct: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDG-GKTKKDDARRSPSMGIKILII 60

Query: 61  CLGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           CLGVVTV+ FSVIL KIWQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Sbjct: 61  CLGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of CmaCh09G012370 vs. NCBI nr
Match: gi|703116980|ref|XP_010101274.1| (hypothetical protein L484_011638 [Morus notabilis])

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 1


Query: 1   MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLIC 60
           M+     RS QF S LFSL +  +S +A   +S E  + K+++    ++ S GIK+V++C
Sbjct: 1   MTSFHGRRSEQFSSLLFSLLILFVSGIAG--ASGEPSNSKSER----KASSAGIKVVIVC 60

Query: 61  LGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
           LG+V V+ FSV L K+WQ+KKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 61  LGLVAVIGFSVFLFKLWQKKKREEQHARLLKLFEDDDELEVELGIRD 101

[Close]

BLAST of CmaCh09G012370 vs. NCBI nr
Match: gi|743863056|ref|XP_011031540.1| (PREDICTED: uncharacterized protein LOC105130650 [Populus euphratica])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-17
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 1


Query: 9   SLQ-FLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVL 68
           SLQ F+ F  S+SLH LS LA + ++ +       K +     S+GIK+V+ CL VV ++
Sbjct: 9   SLQIFVIFFLSISLHLLSGLASDPANPKD----TNKPERHSKSSVGIKVVIACLSVVAII 68

Query: 69  AFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
            F+++L KIWQ+KKREEQHARLLKLFEDDDELE+ELG+RD
Sbjct: 69  GFTMLLFKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 104

[Close]

BLAST of CmaCh09G012370 vs. NCBI nr
Match: gi|951041679|ref|XP_014517992.1| (PREDICTED: uncharacterized protein LOC106775386 isoform X2 [Vigna radiata var. radiata])

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 12  FLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLICLGVVTVLAFSV 71
           FL  L SL L  LS L +  S A+H + +       RS S+G++I++ICLG+VTV+AF V
Sbjct: 11  FLLALISLHLQLLSGLDNNPSDAKH-ENEDVNHHASRS-SVGLRIIIICLGMVTVIAFCV 70

Query: 72  ILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 108
            L K+WQRKKREEQHARLLKLFE+DDELE+ELG+RD
Sbjct: 71  FLFKLWQRKKREEQHARLLKLFEEDDELEVELGMRD 104

The following BLAST results are available for this feature:

BLAST of CmaCh09G012370 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G012370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ0_CUCSA	1.3e-31	77.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650624 PE=4 SV=1	[more]
W9RQG1_9ROSA	1.7e-18	54.21	Uncharacterized protein OS=Morus notabilis GN=L484_011638 PE=4 SV=1	[more]
B9IQD2_POPTR	1.9e-17	55.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10570g PE=4 SV=1	[more]
A0A0B2NP95_GLYSO	3.2e-17	60.78	Uncharacterized protein OS=Glycine soja GN=glysoja_022254 PE=4 SV=1	[more]
I1KW74_SOYBN	3.2e-17	60.78	Uncharacterized protein OS=Glycine max GN=GLYMA_08G237900 PE=4 SV=1	[more]

BLAST of CmaCh09G012370 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09645.1	1.1e-13	41.12	unknown protein	[more]
AT1G57765.2	3.2e-13	46.88	unknown protein	[more]
AT3G53490.1	6.6e-06	40.79	unknown protein	[more]

BLAST of CmaCh09G012370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119434\|ref\|XP_008459655.1\|	3.8e-32	78.70	PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]	[more]
gi\|449447605\|ref\|XP_004141558.1\|	1.9e-31	77.78	PREDICTED: uncharacterized protein LOC101207831 [Cucumis sativus]	[more]
gi\|703116980\|ref\|XP_010101274.1\|	2.4e-18	54.21	hypothetical protein L484_011638 [Morus notabilis]	[more]
gi\|743863056\|ref\|XP_011031540.1\|	1.6e-17	55.00	PREDICTED: uncharacterized protein LOC105130650 [Populus euphratica]	[more]
gi\|951041679\|ref\|XP_014517992.1\|	2.0e-17	59.38	PREDICTED: uncharacterized protein LOC106775386 isoform X2 [Vigna radiata var. r...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012370.1	CmaCh09G012370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33780	FAMILY NOT NAMED	coord: 8..107 score: 1.3
None	No IPR available	PANTHER	PTHR33780:SF1	SUBFAMILY NOT NAMED	coord: 8..107 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012370	Cucsa.061710	Cucumber (Gy14) v1	cgycmaB0087
CmaCh09G012370	Cla012513	Watermelon (97103) v1	cmawmB015
CmaCh09G012370	MELO3C022208	Melon (DHL92) v3.5.1	cmameB010
CmaCh09G012370	ClCG08G000420	Watermelon (Charleston Gray)	cmawcgB030
CmaCh09G012370	CSPI05G31310	Wild cucumber (PI 183967)	cmacpiB030
CmaCh09G012370	CmoCh01G008780	Cucurbita moschata (Rifu)	cmacmoB043
CmaCh09G012370	CmoCh09G013070	Cucurbita moschata (Rifu)	cmacmoB029
CmaCh09G012370	Lsi08G000350	Bottle gourd (USVL1VR-Ls)	cmalsiB033
CmaCh09G012370	Cp4.1LG02g10670	Cucurbita pepo (Zucchini)	cmacpeB056
CmaCh09G012370	Cp4.1LG06g10100	Cucurbita pepo (Zucchini)	cmacpeB062
CmaCh09G012370	MELO3C022208.2	Melon (DHL92) v3.6.1	cmamedB011
CmaCh09G012370	CsaV3_5G040360	Cucumber (Chinese Long) v3	cmacucB0037
CmaCh09G012370	Cla97C08G144850	Watermelon (97103) v2	cmawmbB036
CmaCh09G012370	Bhi06G000208	Wax gourd	cmawgoB0012
CmaCh09G012370	CsGy5G030630	Cucumber (Gy14) v2	cgybcmaB579
CmaCh09G012370	Carg27638	Silver-seed gourd	carcmaB0500
CmaCh09G012370	Carg21724	Silver-seed gourd	carcmaB0061

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G012370	CmaCh01G008380	Cucurbita maxima (Rimu)	cmacmaB046

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012370	Cucumber (Chinese Long) v2	cmacuB030