CmoCh01G008780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCATTAGAAAAAAATAAAAATAAAAAACCGGCTAAAATTCCGCCATTTTCGACCCTTCCCAATTTCCTTCTCAAGAAATTCCGACCAAATCATCCTCCTCGAGAAAGCTGCAGAGATCGGCGAAGGGATGTCTCGATCTCGAAGCTCCATATCTCTGCAAGTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGGTACAAATCCACCTTTTCGATTTTCAAATTCTAAATTCGGTTTTATGTTCTTTGTAACTCTGGTAGCTAGACCGAGTTGAATTTATTAAAGAATTGTAGCTATGATGATTGTTTGTTGCTTTTCTGCTGAAATTATTGTCGCATTGTTTTTTATTGTAGATTTTAGGGTAACGTTGTTCTGTTCCGTAATGGTTTGGGGAATTACCGTTCTTAGGATTCATGGCATTTGAATTGTAATAAGCAAAATGAATGGGTGGAATAGATGATTCGATATTTTGATTGCAATTTCTTGGAAAATTACTACAATTTCACGAATTCCCTGTTTACCTTTTTCCTCCCTTTTTGCCGCTTGCTGTATATTTGTGTTTCTTGAGGAGGCATTTGAAATTGTGATGATTTAATTTCTTACGTTTTTGACTTGTGTGAAAATGAAAAACAAGATGAATGTAATTGAATTTGAATGTGTCTTATAATTTAGACCGCGAGTTGTAGTTGGATGGACAAATGATTGTTTGGTTATGGTTTTGGTTTTGTTCTTCTTGTCATTCCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTATGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGAGCTCTCTGATCCTCGTCCTCCATATCCAACCAATTAAGAGGAGGTGCACATTGCGGATTCCATTGCCTTCTGTTTAATGATATGTACAAGCTTTTTGATCTTATCCTGATTTTTTTTTTGGTTCGTAAAATCATAGCAAATTCTTTGTTGTCAATTAGTTTTGAATAATGTTATTGCTCCTTCAATCATTCATCTATACATGTGTATGATCTCTGAGGCATGTTTCAAATATAAATCATTGTTTAGACAATTGTTCATATTAGAAAATACATGGAGATTGAATACTAAGCATGTCATTTGATTATGAAGAAACCTTATAAAAAATGCTTCATTTTCCTCTCCAACCAACGTGGATCCCATAGTGAACGTCACCCACTTGTATTGTGTTTTTATTGAAAAGTTGAAGGTTTATGATAAGCGGATTTGGTTTGACCCAATTGATTTGTGTTCTGATTTGTCTGAACATGTAGTAAAGCACTTTTGCAGAGGCTGTTTTGAGCTAAGAATTTTGGTGGTTTGTGGAGCAGCCAGCACCAGCAGGTACTCATAGCTTTAAGACTTACTTCAATAGTTTTGGCCCAAACAAACTGCTCTGAGTTAGTCTAATAGTCTCATTGGGGCAAGG TCTCCATTAGAAAAAAATAAAAATAAAAAACCGGCTAAAATTCCGCCATTTTCGACCCTTCCCAATTTCCTTCTCAAGAAATTCCGACCAAATCATCCTCCTCGAGAAAGCTGCAGAGATCGGCGAAGGGATGTCTCGATCTCGAAGCTCCATATCTCTGCAAGTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTATGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGAGCTCTCTGATCCTCGTCCTCCATATCCAACCAATTAAGAGGAGTAAAGCACTTTTGCAGAGGCTGTTTTGAGCTAAGAATTTTGGTGGTTTGTGGAGCAGCCAGCACCAGCAGGTACTCATAGCTTTAAGACTTACTTCAATAGTTTTGGCCCAAACAAACTGCTCTGAGTTAGTCTAATAGTCTCATTGGGGCAAGG ATGTCTCGATCTCGAAGCTCCATATCTCTGCAAGTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTATGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
BLAST of CmoCh01G008780 vs. TrEMBL
Match: A0A0A0KXZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650624 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.9e-30 Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TrEMBL
Match: B9IQD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10570g PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.7e-20 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TrEMBL
Match: A0A0B2NP95_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022254 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-19 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TrEMBL
Match: I1KW74_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G237900 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-19 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TrEMBL
Match: A0A0L9VHC3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g275300 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TAIR10
Match: AT1G09645.1 (AT1G09645.1 unknown protein) HSP 1 Score: 84.0 bits (206), Expect = 6.2e-17 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TAIR10
Match: AT1G57765.2 (AT1G57765.2 unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 3.4e-15 Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 1
BLAST of CmoCh01G008780 vs. TAIR10
Match: AT3G53490.1 (AT3G53490.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of CmoCh01G008780 vs. NCBI nr
Match: gi|659119434|ref|XP_008459655.1| (PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 85/107 (79.44%), Postives = 92/107 (85.98%), Query Frame = 1
BLAST of CmoCh01G008780 vs. NCBI nr
Match: gi|449447605|ref|XP_004141558.1| (PREDICTED: uncharacterized protein LOC101207831 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30 Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 1
BLAST of CmoCh01G008780 vs. NCBI nr
Match: gi|743863056|ref|XP_011031540.1| (PREDICTED: uncharacterized protein LOC105130650 [Populus euphratica]) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-20 Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 1
BLAST of CmoCh01G008780 vs. NCBI nr
Match: gi|224145111|ref|XP_002325530.1| (hypothetical protein POPTR_0019s10570g [Populus trichocarpa]) HSP 1 Score: 104.8 bits (260), Expect = 9.6e-20 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of CmoCh01G008780 vs. NCBI nr
Match: gi|734306151|gb|KHM98844.1| (hypothetical protein glysoja_022254 [Glycine soja]) HSP 1 Score: 102.8 bits (255), Expect = 3.7e-19 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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