Cucsa.061710 (gene) Cucumber (Gy14) v1

NameCucsa.061710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTransmembrane protein, putative
Locationscaffold00651 : 204488 .. 205954 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACCCCCAGAAATCCTCACATAGAAAAGATTTAACGAAAAGTCCGCCATTTTCATCCTTCCTCGATCTCGTTCTGAAGAATTTCTCACCAATTCATCTTACTCCAAGAAGTTGCAGAGATCGGGGAAGGGATGTCCGGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCATTTTTAGTTTTATCTTTTCCCATTCTCTTTCAGGTACATATATATCCCTTTTTCAAATTTCTCTTAATTAATTCGATTTCTCTTTTAATCTATGCTACCTAAACCCCCGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGACCTCAAATTCTAGTTGAATGAACGTACGAGGTTTTTAGTTTGGTTTTTCTTGTATTTCTAGTGTTGGCAAAGGAAAATTCAAGTGCTAAAGATGGTGGTAAAACTAAAAAGGACGATGCTCGGAGGAGCCCGTCGATGGGGATCAAGATACTAATCATATGTCTAGGAGTTGTGACTGTTATTATCTTTTCTGTAATTCTATTCAAGATATGGCAGAAGAAGAAGAGAGAAGAACAACATGCTCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTAGAAGTCGAGCTTGGACTTCGAGATTGAGCTTCGTGATACTCATACTCTATCCGATTAATTAAGAGGAGGTGCACATTTGTGGATTCAATTGCCTTTTGTTTAAATGATGCATACAAGCTCTTAGCTATTATTCCAATTTTGTTTTTGGATAAGCTGGGCTCCTAAAATGTCATAGCAAATTCTTTCTTGTCAATTAGTTTTGAATAATGTTGTTCCTCCTTCAATCATTCATCTTAGACATGTAACATGTTTATGATATCTGAGGCATGTCTCAAATATAAATCGTTGTTTAGTGAATTGGTCAAGTTATATAGTAAATACATGTTACATTTTTCTAGGGAGTGGGAAATGGTGGTTGATAGTATATGCTGTTGAGCTAGCGATGTTCTGAAGAATGAGACGATTTTCATTTTC

mRNA sequence

CCAACCCCCAGAAATCCTCACATAGAAAAGATTTAACGAAAAGTCCGCCATTTTCATCCTTCCTCGATCTCGTTCTGAAGAATTTCTCACCAATTCATCTTACTCCAAGAAGTTGCAGAGATCGGGGAAGGGATGTCCGGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCATTTTTAGTTTTATCTTTTCCCATTCTCTTTCAGTGTTGGCAAAGGAAAATTCAAGTGCTAAAGATGGTGGTAAAACTAAAAAGGACGATGCTCGGAGGAGCCCGTCGATGGGGATCAAGATACTAATCATATGTCTAGGAGTTGTGACTGTTATTATCTTTTCTGTAATTCTATTCAAGATATGGCAGAAGAAGAAGAGAGAAGAACAACATGCTCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTAGAAGTCGAGCTTGGACTTCGAGATTGAGCTTCGTGATACTCATACTCTATCCGATTAATTAAGAGGAGGTGCACATTTGTGGATTCAATTGCCTTTTGTTTAAATGATGCATACAAGCTCTTAGCTATTATTCCAATTTTGTTTTTGGATAAGCTGGGCTCCTAAAATGTCATAGCAAATTCTTTCTTGTCAATTAGTTTTGAATAATGTTGTTCCTCCTTCAATCATTCATCTTAGACATGTAACATGTTTATGATATCTGAGGCATGTCTCAAATATAAATCGTTGTTTAGTGAATTGGTCAAGTTATATAGTAAATACATGTTACATTTTTCTAGGGAGTGGGAAATGGTGGTTGATAGTATATGCTGTTGAGCTAGCGATGTTCTGAAGAATGAGACGATTTTCATTTTC

Coding sequence (CDS)

ATGTCCGGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCATTTTTAGTTTTATCTTTTCCCATTCTCTTTCAGTGTTGGCAAAGGAAAATTCAAGTGCTAAAGATGGTGGTAAAACTAAAAAGGACGATGCTCGGAGGAGCCCGTCGATGGGGATCAAGATACTAATCATATGTCTAGGAGTTGTGACTGTTATTATCTTTTCTGTAATTCTATTCAAGATATGGCAGAAGAAGAAGAGAGAAGAACAACATGCTCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTAGAAGTCGAGCTTGGACTTCGAGATTGA

Protein sequence

MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD*
BLAST of Cucsa.061710 vs. TrEMBL
Match: A0A0A0KXZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650624 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.4e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1

Query: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60
           MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC
Sbjct: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60

Query: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

BLAST of Cucsa.061710 vs. TrEMBL
Match: F6I456_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01890 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-22
Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 1

Query: 2   SGSQSS-RSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 61
           SGS S  R L F   IF  I    +S LA + S++KD  K ++ D   +  +GI+I+IIC
Sbjct: 6   SGSGSRWRCLHFFHIIFPTISLLLISGLADDPSNSKDVKKAERHDTHGN-MIGIRIVIIC 65

Query: 62  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LG+V    FSV LFKIWQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 66  LGLVAGAAFSVFLFKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 111

BLAST of Cucsa.061710 vs. TrEMBL
Match: W9RQG1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011638 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-21
Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 1

Query: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60
           M+     RS QF   +FS +      +L     +   G  +     R++ S GIK++I+C
Sbjct: 1   MTSFHGRRSEQFSSLLFSLL------ILFVSGIAGASGEPSNSKSERKASSAGIKVVIVC 60

Query: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LG+V VI FSV LFK+WQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 61  LGLVAVIGFSVFLFKLWQKKKREEQHARLLKLFEDDDELEVELGIRD 101

BLAST of Cucsa.061710 vs. TrEMBL
Match: B9IQD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10570g PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-21
Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 1

Query: 9   SLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVII 68
           SLQ     F  I  H LS LA + ++ KD   T K  +    S+GIK++I CL VV +I 
Sbjct: 9   SLQIFVIFFLSISLHLLSGLASDPANPKD---TNKPASHSKSSVGIKVVIACLSVVAIIG 68

Query: 69  FSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           F+++L KIWQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 69  FTMLLIKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 104

BLAST of Cucsa.061710 vs. TrEMBL
Match: A0A0B2NP95_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022254 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.2e-21
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 1

Query: 8   RSLQF-LFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTV 67
           RSLQ+ L    + +    LS L    S AK+  K     A RS S+G+KI+II LGVVTV
Sbjct: 6   RSLQYPLLLALTSLHLQHLSGLDNNPSGAKNENKDVNHHASRS-SVGLKIIIIFLGVVTV 65

Query: 68  IIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           I F V LFK+WQ+KKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 66  IAFCVFLFKLWQRKKREEQHARLLKLFEDDDELEVELGMRD 105

BLAST of Cucsa.061710 vs. TAIR10
Match: AT1G09645.1 (AT1G09645.1 unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = 1

Query: 28  LAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVILFKIWQKKKREEQHA 87
           L+ ++ +   G KT+   +  S   G K++++ +G V V +FS  L+K+WQKKKR+EQ+A
Sbjct: 29  LSGDSKNTNAGVKTESHTS--SSKTGTKVILVLVGFVAVAMFSFFLYKLWQKKKRDEQYA 88

Query: 88  RLLKLFEDDDELEVELGLRD 108
           RLLKLFE+DDELEVELGLRD
Sbjct: 89  RLLKLFEEDDELEVELGLRD 106

BLAST of Cucsa.061710 vs. TAIR10
Match: AT1G57765.2 (AT1G57765.2 unknown protein)

HSP 1 Score: 81.6 bits (200), Expect = 3.2e-16
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 1

Query: 14  FFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVIL 73
           FF+           ++ + +S+  G K +   +  S   G K++ I LG   V   S  L
Sbjct: 26  FFLAMLYLDSVYQCISGDPNSSSTGAKAESHTS--SSKTGTKVIFILLGFGAVAGLSFFL 85

Query: 74  FKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           +K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Sbjct: 86  YKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

BLAST of Cucsa.061710 vs. TAIR10
Match: AT3G53490.1 (AT3G53490.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 4.4e-10
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 1

Query: 34  SAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVILFKIWQKKKREEQHARLLKLF 93
           S K+ G T+K++ +     GI +LI+ L +  V +  ++ +K W+KKKR+++ AR LKLF
Sbjct: 151 SNKESG-TEKEEQKGGMHPGIVVLIVVLLLGVVAVGLLVGYKYWRKKKRQQEQARFLKLF 210

Query: 94  EDDDELEVELGLRD 108
           ED D++E ELGL +
Sbjct: 211 EDGDDIEDELGLEN 223

BLAST of Cucsa.061710 vs. NCBI nr
Match: gi|449447605|ref|XP_004141558.1| (PREDICTED: uncharacterized protein LOC101207831 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 6.4e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1

Query: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60
           MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC
Sbjct: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60

Query: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

BLAST of Cucsa.061710 vs. NCBI nr
Match: gi|659119434|ref|XP_008459655.1| (PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-47
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 1

Query: 1   MSGSQSSRSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 60
           MSGSQSSRSLQFLFF+F+FIF HSLSVLA +NSSAKDGGKTKKDD RRSPSMGIKILIIC
Sbjct: 1   MSGSQSSRSLQFLFFLFNFIFLHSLSVLANDNSSAKDGGKTKKDDVRRSPSMGIKILIIC 60

Query: 61  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LGVVTVI FSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  LGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

BLAST of Cucsa.061710 vs. NCBI nr
Match: gi|743863056|ref|XP_011031540.1| (PREDICTED: uncharacterized protein LOC105130650 [Populus euphratica])

HSP 1 Score: 112.1 bits (279), Expect = 6.2e-22
Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 1

Query: 9   SLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVII 68
           SLQ     F  I  H LS LA + ++ KD   T K +     S+GIK++I CL VV +I 
Sbjct: 9   SLQIFVIFFLSISLHLLSGLASDPANPKD---TNKPERHSKSSVGIKVVIACLSVVAIIG 68

Query: 69  FSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           F+++LFKIWQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 69  FTMLLFKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 104

BLAST of Cucsa.061710 vs. NCBI nr
Match: gi|296089426|emb|CBI39245.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 1

Query: 2   SGSQSS-RSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 61
           SGS S  R L F   IF  I    +S LA + S++KD  K ++ D   +  +GI+I+IIC
Sbjct: 5   SGSGSRWRCLHFFHIIFPTISLLLISGLADDPSNSKDVKKAERHDTHGN-MIGIRIVIIC 64

Query: 62  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LG+V    FSV LFKIWQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 65  LGLVAGAAFSVFLFKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 110

BLAST of Cucsa.061710 vs. NCBI nr
Match: gi|359493474|ref|XP_003634607.1| (PREDICTED: uncharacterized protein LOC100854818 [Vitis vinifera])

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 1

Query: 2   SGSQSS-RSLQFLFFIFSFIFSHSLSVLAKENSSAKDGGKTKKDDARRSPSMGIKILIIC 61
           SGS S  R L F   IF  I    +S LA + S++KD  K ++ D   +  +GI+I+IIC
Sbjct: 6   SGSGSRWRCLHFFHIIFPTISLLLISGLADDPSNSKDVKKAERHDTHGN-MIGIRIVIIC 65

Query: 62  LGVVTVIIFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 108
           LG+V    FSV LFKIWQKKKREEQHARLLKLFEDDDELEVELG+RD
Sbjct: 66  LGLVAGAAFSVFLFKIWQKKKREEQHARLLKLFEDDDELEVELGIRD 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KXZ0_CUCSA4.4e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650624 PE=4 SV=1[more]
F6I456_VITVI7.4e-2259.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01890 PE=4 SV=... [more]
W9RQG1_9ROSA3.7e-2153.27Uncharacterized protein OS=Morus notabilis GN=L484_011638 PE=4 SV=1[more]
B9IQD2_POPTR3.7e-2158.59Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10570g PE=4 SV=1[more]
A0A0B2NP95_GLYSO6.2e-2161.39Uncharacterized protein OS=Glycine soja GN=glysoja_022254 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G09645.11.3e-1752.50 unknown protein[more]
AT1G57765.23.2e-1645.74 unknown protein[more]
AT3G53490.14.4e-1041.89 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449447605|ref|XP_004141558.1|6.4e-51100.00PREDICTED: uncharacterized protein LOC101207831 [Cucumis sativus][more]
gi|659119434|ref|XP_008459655.1|1.1e-4793.46PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo][more]
gi|743863056|ref|XP_011031540.1|6.2e-2259.60PREDICTED: uncharacterized protein LOC105130650 [Populus euphratica][more]
gi|296089426|emb|CBI39245.3|1.1e-2159.81unnamed protein product [Vitis vinifera][more]
gi|359493474|ref|XP_003634607.1|1.1e-2159.81PREDICTED: uncharacterized protein LOC100854818 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.061710.1Cucsa.061710.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33780FAMILY NOT NAMEDcoord: 6..107
score: 7.8