CmaCh09G000490 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTATCTATGCCCATTCCCAGCTCTCAGGGCCCCACCTCCCTGCATTATCATCCCCCCTTCCCTCTTCCCACTCTGTTAGTGAGATTCGACTCCCTCTAATCTCTACCACTTCAAAACACCGCCATCTTCGTGTTGTCTGCTCCAGCAGTGATGGTAGTGGTAGCAAGAAGGGAGTACCCAGTTCCAACTATGTTGTGCCGCTCAATAAATCATTTTCCGCAGCTAACTCATCCTGAATCACCCGACCCCTTGCCGAGATCCTCCGGGATCTAAACAAGAGAATCCCCGATAACATTGCCCAGAAACTTCCTCAATCCGCTACTTTCATCCCTTGGTTTCATGCCAATAGAATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGACGTTATATTCTCCCACAATGGAAGCGTGACTGTAAGAGGATCTGATGGAGAGGCACACCGTGAATCGACTGGAACAGTATCAGCCACCAATAGCAGTAATGAAGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGGCTCGGTTTGTATCTGTACCATGAAGAATGAATGAATGCCATGCTTATGCTTCCAACATGTATTGAATTGAAGTTATTTTGTAGAAATGGGTATAATGTTGTTGGCCTTCAACTTTAGAAACCTCATTTCTGTGGTGAATTAAAGTTACAATTGTTTACTTTTGTTGTGCACGTGCATCTCGTGTGTCCATATTCAAACTTTTATTTTTTATTTTATTATTATTATTTTTTTTTTTTTTGGGTCTATTTTTAAGACCGAGATTTGTTAATACGGGCTTTACTTTGGGCTTCTATTGGGCTTTGTTTTCAAGCCCGAGATTTGTTGATACGGGCTTTTCTTTGGGCTTCTATTGGGCTTTGTTTTAAATGGCGAAATCTGATAAGACGGGCCTTCGGAGATGCTCTTTGCCGTGCGGGTGGCGGGAGTCGCACCGCCAACGAATATTAGGAAAGAAAACAAACACAAAGCGGCGGAGAGATGGGGAAGGGCAAAAAATAATCTAATGACGTGGACCAATGAAATAGGAGTGCGGAGATTATTGAGGTGGCAATAAATTTAGAATCCCGCCTAAATCCCTGCTTTCATTTCCTGGGCAATTGAATTTCCAATTTGCCCTTCTCAGGGGCATAATTATCCCTTTTTTTCTCTCAAAACTCTCTCCACCCTCGTATCCCTTCTCTCCTTCTATCTCAAACGCAGGTCCGCTTCTTCCTCCCTCTTCAAACCCTAAACCTAACCTATCCTCCCTCCGGAGCTCTCTTCCTTCGGTACGTTACATTGATCTCCTTCGATTTCTCACGTAATTTCACGTCTTTTGTTTGTTTCCTCTCGAGATTGTTGCTGATCCGATCGTATACTGCAGGATTCGAAATGAAAGGCGGAAAATCGAAGTCGGAGTCGAAGAAAGCAGACACCAAGTAAGTTTTTTTTTCTTCCTCCGTGCTTTTTCTGTCGTATATGTTTATGTTTTAGTTTTGATCGGCCCTAGATCTATAAAGCCTCATTGTTGTGAATTACCTGTCCCAAAGCTAGGCGTTGACCTCTTTCTTTCTTTCTGATTGATCGTTGTCTATGGGTTTTCCCCCCAAAAATTGTAGGCTTGCAGTGAAGAAAGGTGCAGCCAACGCGGGCAAAAAAGGAAGTAAGAAGGCAGCGAAAGATCCTAACAAGCCCAAGAGGCCCGCCAGTGCCTTCTTCGTTTTTATGTAATTTTTTAATCTTTTAATTTACATTTCGAATTCTGGATTATTCTGCCTACATTCAATTTATTTAATTTTCATGGTTGTGAAGTTTTAGAAAAAAATGTCAACAAGGACAGATTAACGATGAACTTGATTTCCACGATTTTTTATTGGGGTATCGAACATTTGTAGCTAACAGTATTCAAGTTCGTCTCAAATACCTTACGGAAACATAAGCGAATGTTAACACAGCTTGGCTCTCTACAAAAGAGATTCCTTTGATTTGTTGTGTCTATTTGCTTTAGAACCTTTTTTTTTTTTGCAGTTGTTTTCTTCCTGTAAATCGTCGAGTACGTATATAATCATTGTGTTGTCATGTTGTTGCATTTTTTGATAATTAAAGGGAAGAGTTCAGGAAGAAGTTCAATGAGGAGAATCCGAATAACAAAGCAGTGTCTGCTGTAAGCTATTTAGCTATCTAATAGTCGCTCTTTTAGTTGTTGACTCCATTCCAACTTTTATGGCTCTTTGTTGAAATGATCGATGATACCTACAAATGATGTAATCAGGTTGGTAAAGCTGCTGGACAGAAATGGAAATCGATGTCAGAAGCTGTATGTGATAGCTATCGTAGTATTTCTTATACTTCTCCTGGTATTATAAACTCTGTCTGAATTACTGTTTATAATATCAGGATAAAGCACCTTACGTTGCCAAGGCTGACAAGAGGAAGGTTGAATATGAAAAAGTTATGAAGGCCTATAACAAGAAACAGGTATATCCTCTTGTTAAAGCTTATGAAGCATTTATATTTCCGCACTGTTTTTCTTATTTGAATTGAATTCACTCCCCTTGTGAGTTTCAGGCCAGTGGAGCCAATGCTGCAGAAGAAGATGAATCTGAGAAATCAGTGTCTGAGGTGAATGATGATGAGGAAGGAGATGAGGGCAGCGAAGAGGTAATCCTTTTTATGGAGTTTATTTAAATTAGACATTATAGTGGTAATGTTTGAGCCCTAAATTAATTTTATTTTATTTTTCTTTATTTTTACAGGAGGACGATGACGACGAGTGATGAAGATGTAGATGATAGCAACGTCATTTAGGCTCTCAGTGTACTTGATCTTTCCATAATAATGGTCTGATCATTTCCTGTTAATTGGTTTTGTTATTATCATGAAAATATTTTAGCATCTCCCTGTTATTTTGTTTGTGCATTCAGTAACGGAAGGTTGTATTGGGAGATCATCTGTCTTGTACCTTACAATGTTAGTTATCCAATCCAACTATCTTTTTTTTCCCTTATGTTTCTCTGAGATAGCAAGAACACTCCTCTTCACACCATGTGATAAGATGAAGATTCAATCAAATCCACCCACTAAATCTGTATTACAGTTAACAGACAATCTCTGAATTCCAG ATGGTTATCTATGCCCATTCCCAGCTCTCAGGGCCCCACCTCCCTGCATTATCATCCCCCCTTCCCTCTTCCCACTCTGTTAGTGAGATTCGACTCCCTCTAATCTCTACCACTTCAAAACACCGCCATCTTCGTGTTGTCTGCTCCAGCAGTGATGGTAGTGGTAGCAAGAAGGGAATCCTCCGGGATCTAAACAAGAGAATCCCCGATAACATTGCCCAGAAACTTCCTCAATCCGCTACTTTCATCCCTTGGTTTCATGCCAATAGAATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGACGTTATATTCTCCCACAATGGAAGCGTGACTGTAAGAGGATCTGATGGAGAGGCACACCGTGAATCGACTGGAACAGTATCAGCCACCAATAGCAGTAATGAAGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGGCTCGGATTCGAAATGAAAGGCGGAAAATCGAAGTCGGAGTCGAAGAAAGCAGACACCAAGCTTGCAGTGAAGAAAGGTGCAGCCAACGCGGGCAAAAAAGGAAGTAAGAAGGCAGCGAAAGATCCTAACAAGCCCAAGAGGCCCGCCAGTGCCTTCTTCGTTTTTATGGAAGAGTTCAGGAAGAAGTTCAATGAGGAGAATCCGAATAACAAAGCAGTGTCTGCTGTTGGTAAAGCTGCTGGACAGAAATGGAAATCGATGTCAGAAGCTGATAAAGCACCTTACGTTGCCAAGGCTGACAAGAGGAAGGTTGAATATGAAAAAGTTATGAAGGCCTATAACAAGAAACAGGCCAGTGGAGCCAATGCTGCAGAAGAAGATGAATCTGAGAAATCAGTGTCTGAGGTGAATGATGATGAGGAAGGAGATGAGGGCAGCGAAGAGGAGGACGATGACGACGAGTGATGAAGATGTAGATGATAGCAACGTCATTTAGGCTCTCAGTGTACTTGATCTTTCCATAATAATGGTCTGATCATTTCCTGTTAATTGGTTTTGTTATTATCATGAAAATATTTTAGCATCTCCCTGTTATTTTGTTTGTGCATTCAGTAACGGAAGGTTGTATTGGGAGATCATCTGTCTTGTACCTTACAATGTTAGTTATCCAATCCAACTATCTTTTTTTTCCCTTATGTTTCTCTGAGATAGCAAGAACACTCCTCTTCACACCATGTGATAAGATGAAGATTCAATCAAATCCACCCACTAAATCTGTATTACAGTTAACAGACAATCTCTGAATTCCAG ATGGTTATCTATGCCCATTCCCAGCTCTCAGGGCCCCACCTCCCTGCATTATCATCCCCCCTTCCCTCTTCCCACTCTGTTAGTGAGATTCGACTCCCTCTAATCTCTACCACTTCAAAACACCGCCATCTTCGTGTTGTCTGCTCCAGCAGTGATGGTAGTGGTAGCAAGAAGGGAATCCTCCGGGATCTAAACAAGAGAATCCCCGATAACATTGCCCAGAAACTTCCTCAATCCGCTACTTTCATCCCTTGGTTTCATGCCAATAGAATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGACGTTATATTCTCCCACAATGGAAGCGTGACTGTAAGAGGATCTGATGGAGAGGCACACCGTGAATCGACTGGAACAGTATCAGCCACCAATAGCAGTAATGAAGATCCTGTAGCTGCTGCAGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGGCTCGGATTCGAAATGAAAGGCGGAAAATCGAAGTCGGAGTCGAAGAAAGCAGACACCAAGCTTGCAGTGAAGAAAGGTGCAGCCAACGCGGGCAAAAAAGGAAGTAAGAAGGCAGCGAAAGATCCTAACAAGCCCAAGAGGCCCGCCAGTGCCTTCTTCGTTTTTATGGAAGAGTTCAGGAAGAAGTTCAATGAGGAGAATCCGAATAACAAAGCAGTGTCTGCTGTTGGTAAAGCTGCTGGACAGAAATGGAAATCGATGTCAGAAGCTGATAAAGCACCTTACGTTGCCAAGGCTGACAAGAGGAAGGTTGAATATGAAAAAGTTATGAAGGCCTATAACAAGAAACAGGCCAGTGGAGCCAATGCTGCAGAAGAAGATGAATCTGAGAAATCAGTGTCTGAGGTGAATGATGATGAGGAAGGAGATGAGGGCAGCGAAGAGGAGGACGATGACGACGAGTGA MVIYAHSQLSGPHLPALSSPLPSSHSVSEIRLPLISTTSKHRHLRVVCSSSDGSGSKKGILRDLNKRIPDNIAQKLPQSATFIPWFHANRMLSFYAPGWCGEIRDVIFSHNGSVTVRGSDGEAHRESTGTVSATNSSNEDPVAAAEEIAFCKACARFGLGFEMKGGKSKSESKKADTKLAVKKGAANAGKKGSKKAAKDPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSEADKAPYVAKADKRKVEYEKVMKAYNKKQASGANAAEEDESEKSVSEVNDDEEGDEGSEEEDDDDE
BLAST of CmaCh09G000490 vs. Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.2e-46 Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 1
BLAST of CmaCh09G000490 vs. Swiss-Prot
Match: HMGB3_ARATH (High mobility group B protein 3 OS=Arabidopsis thaliana GN=HMGB3 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.7e-38 Identity = 98/149 (65.77%), Postives = 123/149 (82.55%), Query Frame = 1
BLAST of CmaCh09G000490 vs. Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 6.8e-37 Identity = 96/150 (64.00%), Postives = 123/150 (82.00%), Query Frame = 1
BLAST of CmaCh09G000490 vs. Swiss-Prot
Match: HMGB2_ARATH (High mobility group B protein 2 OS=Arabidopsis thaliana GN=HMGB2 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 6.8e-37 Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 1
BLAST of CmaCh09G000490 vs. Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.3e-35 Identity = 99/159 (62.26%), Postives = 120/159 (75.47%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TrEMBL
Match: A0A0A0L5X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G663650 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 6.1e-61 Identity = 138/198 (69.70%), Postives = 145/198 (73.23%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TrEMBL
Match: W9RJ53_9ROSA (High mobility group B protein 2 OS=Morus notabilis GN=L484_024862 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TrEMBL
Match: V7AQT2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G012000g PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45 Identity = 113/152 (74.34%), Postives = 133/152 (87.50%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TrEMBL
Match: A0A151RZ15_CAJCA (HMG1/2-like protein OS=Cajanus cajan GN=KK1_030553 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.2e-45 Identity = 111/147 (75.51%), Postives = 128/147 (87.07%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TrEMBL
Match: I1JSU3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G016800 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44 Identity = 113/152 (74.34%), Postives = 132/152 (86.84%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TAIR10
Match: AT5G47870.1 (AT5G47870.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39 Identity = 80/113 (70.80%), Postives = 89/113 (78.76%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TAIR10
Match: AT1G20693.1 (AT1G20693.1 high mobility group B2) HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38 Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TAIR10
Match: AT1G20696.2 (AT1G20696.2 high mobility group B3) HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33 Identity = 78/112 (69.64%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TAIR10
Match: AT2G17560.1 (AT2G17560.1 high mobility group B4) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30 Identity = 84/150 (56.00%), Postives = 109/150 (72.67%), Query Frame = 1
BLAST of CmaCh09G000490 vs. TAIR10
Match: AT3G51880.2 (AT3G51880.2 high mobility group B1) HSP 1 Score: 119.0 bits (297), Expect = 5.2e-27 Identity = 88/171 (51.46%), Postives = 106/171 (61.99%), Query Frame = 1
BLAST of CmaCh09G000490 vs. NCBI nr
Match: gi|449455607|ref|XP_004145544.1| (PREDICTED: uncharacterized protein LOC101203655 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61 Identity = 138/198 (69.70%), Postives = 145/198 (73.23%), Query Frame = 1
BLAST of CmaCh09G000490 vs. NCBI nr
Match: gi|659104775|ref|XP_008452973.1| (PREDICTED: HMG1/2-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60 Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of CmaCh09G000490 vs. NCBI nr
Match: gi|659104777|ref|XP_008452974.1| (PREDICTED: HMG1/2-like protein isoform X2 [Cucumis melo]) HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59 Identity = 136/148 (91.89%), Postives = 144/148 (97.30%), Query Frame = 1
BLAST of CmaCh09G000490 vs. NCBI nr
Match: gi|449455609|ref|XP_004145545.1| (PREDICTED: HMG1/2-like protein [Cucumis sativus]) HSP 1 Score: 236.1 bits (601), Expect = 8.2e-59 Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 1
BLAST of CmaCh09G000490 vs. NCBI nr
Match: gi|659104708|ref|XP_008452970.1| (PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo]) HSP 1 Score: 233.8 bits (595), Expect = 4.1e-58 Identity = 134/198 (67.68%), Postives = 141/198 (71.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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