CmaCh07G008060 (gene) Cucurbita maxima (Rimu)

NameCmaCh07G008060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhotosystem I reaction center subunit N
LocationCma_Chr07 : 3691354 .. 3696297 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAACATTTATAAAGATTTATGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGGTTTCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTTTCTGATGAGCAACCAGACAGCCAAATTTATTTAGGAGGTTAGTTGTTGCATTCAGAATTCAAGTTTCTAGCCGAAATTCGTTTTGCCTGATGCTATGTAAGAACCTGTACAAGATAATTGCTGCGAAATTTTGGTATTTTTCTGATTTTCTTGTTTCTCCATTATGATTTATGGGTTTTGTTTACTGTAGCTCATGTCTGGGAATTCTTAGTATGGGATATTGGCATTTGATTCAAACTTAAAAGTCTGTGTGATTGATTATGACCAACGGACTGCTTTTCTTGTAAAAACATCTTATGAAGTGATTGATTTCTTTTAGGAGTGATAGTGTTAAATTTCATCGAAATGTTTCAGGACGCCTTTGGTTGAAAGGAGAAGGAAAAAATAAGAATAATGTTTAAGCGGAAAGAAGAAAGCATACTCCATTAGTTCTTAAATCATTCAACATCTTAATAGAATTGACAGCCGAAAGCCATGTACATTAGTGAAGAGTATATGTAATACGAAACTGTGATATCTAAGAACTCAAATTATAGTGAGATGATACCCAAATGATGCCTGACGTAGATAATGATAGTTCTTCTATTCAAACTAATCCTTTCACTAATTCTTCCCATAATGAGTATGGTATTCTGGACATTTTTTTTGGTTTATATTGAATCCTGGAAGAAATACATATTGTTCTTCACTCTTTGACAAGAAAATGTAGTGTGTATATTCGTGAATTATCGCTCTCTTAATTTTTGCGACTGCTTGTGAGTTATGATTATACAATTGTTGAGTCACATTCTACCATGCCTGTATTTTGCAGATAGCTAGGAATTGGACTTTGTAGCTTCATTTTGATGGCTATTGTTGAATCCATACTTGATCTTCAGGTACAAGATCCACCTGAGGAAGAGTTCTATTCTGCTGATTTGACTTGGACCAAGTTTGGCAATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGGTATGTGAAAATTGTCCAAGTTACAAACCTTCCATATCTTTTCAATCATTTGAGAAGATATTGATGAATATGTGGAAAATACCAATGGATGATTCTGTTTCCTTGGACCCATCAAATTCTGGATGAAATTCAGAAACTAGTTGAATGGAGTTCTTCAAATGATATAAGCTCTGTGGTAAATAAGCTGCCCTTGAAATGGGGTTCTGGGAAGGGAAGAACCAGTTTTAGGAAGCCATCATCTATCATGGCTGTTCCATCGGTGTCCAATTCTGTCAGAAAGGCCATGCCAAGGAACCGGAAAAGGAAAAGATTGTCCAGACCAAGATAGCTTGCCCAGCTTGTTTGCTATTTTATTTCCATTGGGCTCTTTTCAATACCTTGATCTCAATTTATATGATTGTTATATAAGATTTGGTGGCTTGTTGAGTAACTTAAGATTGAAGTATGATCATTTTACAAACACACCCAAGATTAACTGGACTTTGCATTTGTTATGGCATGTAGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACGTTTACATAATTTATGTTTCATCTTTTTCAGATCGTTAGATACACTTCTATTTTACGAGTTGATGCTTCTGAATTCTGCAGGAATGTGTATATAGAAACTGTTAAATAAGATCAGTTCAAGTACTTGTTCATTTTAGGTAGCTAGTGTATGAGTAGAATTGATTTTGGGCAGTGTAACAGCCAGCAGATATGACTTTCTTTGGGGGCTTTCCCTTTGAGGCTTCTTCTCACGGTTTTAAAATGCATTTGCTCAAAGAGAGGTTTCTACACTCTTATAAAAAATGTTTCGTTTCCCCCCTCCGACCAATGTGGGATCTCACAATTCACCCCTTTGGGGGCCAGCGTCCTCGTTGACACGTAACGGACCAAAACAGACAATATCTGCTAGCGGTGGGTTTGAGGTATTGTTATAAGTAACTACTCCAGAAACTGTACCTCTGATTTTACCATGGCAAATTGCCGTAGCTTTTTGCCATCATGTATTGAAGGGAACACAGATCATGTACTAATTAGATATCTGTACTACTTACATTCAATCTGAAAATAAAGTCAAAATGTTTCTAGCCGTGTATGTTGATTCTTTGATTCAATAACTAGCTCCAGCAAATGGCATTGAATGATGAAAGTTGTGCCAATATATATGATAATTTTTTCTGCACTTAATTGAACATTTTAATCTTAATCTTAGGCTTAAAAGTTAAAGAAAATTAGTAGTTTTTTTTAGTATAATTTAAGAACAATTTTGGAAGTTTTAGAGCCATTCTAGTTTAACCGATTTAACTAAAATTCAATTTGCTTGAACGTTCCCCATCACGTTTAGATTTCGAAGTGGGTCCAAAATTGAAGCTCGCCACACACATTTTCATGTCCAAAAAACCCTAATCACAGCCATGGATTGCCAATTGGGAGTGAGGAAATCTCACCTTATCCACACTCTCACCACAATTCCTTATCCAATTCCATCTCAGACGTCGTTCATTTATCAGATTCCCTCATAATCCCATTTCCCTATTAACAACTCTCCACCATTAATCCTCCTCCTTCGAGCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGTAAGCTACTCTTTGCTATCCAGATTATTCATGAACATTCAAATTGCTTTTTCATTTAGTTTTAGATCCTATTTCGGTCTATGAACTCTATTCCATTTAATATACTTCAAATGCTCTGTTTCGATTCTTTGACTTGGCATATTAACGAGTCTTGTTCTTGATTCCTTTACTTAGCTCAAAAGTGTGTTTGGTTCTGGTTGTTGCTAAAATAAATTGTCCTCTTTCGGCTTTCCCTTTCGAGCTTTTCTTCAAAGTTTTCAAAACGTGTCGGTTGGTAAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAATCGACATGGGATCCACATACATTTCAAAAGTGAATGAAACAGAATTTTGTCAATTGGATGGTAAACCAACCGATCATGTTCTTAACTCTGTTATTGCAACAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGGTATGAACCTTCATTGCTTAGTTATAATCACTGTTGGCTGTGAAATTTTGAGTACAAGTAAATGTGTTTATGTTAAGCACTAAGTTAGTTCTCTGTCCTGCTTTTGATGAATGCAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGAAGAGAACAGAACAATTTATTAAAGTCTTTGTATCTAATTTTCAACTTTTAGTAAGTGTGAAATTTTATCAAGTCCAATTCCATTGCTTTCTTTCTTCTCTTTCAGACCAAAATAAACCAAATGAGAAAGTAGAAACCCTAGAAATCTTTTTCTTTAGCTATGTTAATGTTAATGTTTCGGGAAGGTTACTAAATATATATTTAATAGTCAATTTGAGCATAACTCAATACAGAAAATACCAATTTTACTGATAGATAATTCGATCTACGCTCCTATCATTGTTAAACAAATGTATATAGTGAGTTGTGTCTAAATCCAAGAAGAGATGTTTAAGTTCATTCAAAATTCTAGAAAGAAAAACGTTTTGGGACAAAGTTCGAACTTAAAATGGTATTGTTGGAGCATCGTTTAGTCGAAATTAACGACTTGATTTAGATTGTTAACTATGTTTTTATGTTCGAAAGGTCAAATTGTGCGAGTGGATAAAGTTTTATGGATTCTTTTTGTGGCTATCAATGACGTTTTTTGCAAATCAAGCTAAAAAAAACGAGAAATTAACCTGCAGTGCACTACACTTGGTGTCGGTGTCACGGTGTAGTAATAAACAAAAACTGATTATTACATGTACAGACCACCTTTCCTTTACAAGAACCAAAAAAATATTGTTATACCTCACAAGATTTCTCTAAGAAAATACATCATATCCCCATTGCTTAAGAAAGCTTTATCCCATTCCCACCATCGTCCATTCATCAATAACTCAAATCTCTCCGATACACAATGGATAAATTTACACCTGAGGATACGAGGAAGATGTCTTTTTCTTCTTTTTCATTAA

mRNA sequence

AGCAACATTTATAAAGATTTATGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGGTTTCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTTTCTGATGAGCAACCAGACAGCCAAATTTATTTAGGAGATAGCTAGGAATTGGACTTTGTAGCTTCATTTTGATGGCTATTGTTGAATCCATACTTGATCTTCAGGTACAAGATCCACCTGAGGAAGAGTTCTATTCTGCTGATTTGACTTGGACCAAGTTTGGCAATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGACCACCTTTCCTTTACAAGAACCAAAAAAATATTGTTATACCTCACAAGATTTCTCTAAGAAAATACATCATATCCCCATTGCTTAAGAAAGCTTTATCCCATTCCCACCATCGTCCATTCATCAATAACTCAAATCTCTCCGATACACAATGGATAAATTTACACCTGAGGATACGAGGAAGATGTCTTTTTCTTCTTTTTCATTAA

Coding sequence (CDS)

ATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGA

Protein sequence

MSNTMTTELHSTYWLDRYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDRSVSHIVWNPGSEFSFCACSWSMQGNLCKHVIKVNMIRSHGGTARVLSLRLDFLHLFGLLHYPSDSDFVQKLQRVMATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK
BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 5.9e-57
Identity = 118/172 (68.60%), Postives = 139/172 (80.81%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKL-PAIRAQQARVPEAK-N 201
           MA MNSSVL C+YAI+G+GS ELN K+  V S    G     + P I+AQ+    +   +
Sbjct: 1   MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDVDGS 60

Query: 202 EGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 261
            GRR+A++FL A+LF+ AA S++  ANAGVI+EYLE+SK NKELNDKKRLATSGANFARA
Sbjct: 61  NGRRSAMVFLAATLFSTAAVSAS--ANAGVIDEYLERSKTNKELNDKKRLATSGANFARA 120

Query: 262 YTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           +TVQFGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWK
Sbjct: 121 FTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWK 170

BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-43
Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 1

Query: 189 AQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKR 248
           A   RV  A  + RR+ALL L A++FAA AAS+ S A A V +EYLEKSK NKELNDKKR
Sbjct: 24  AAAKRVQVAPAKDRRSALLGL-AAVFAATAASAGS-ARASVFDEYLEKSKLNKELNDKKR 83

Query: 249 LATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNV 308
            ATSGANFARAYTVQFGSCKFP NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNV
Sbjct: 84  AATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNV 143

Query: 309 FWK 312
           FWK
Sbjct: 144 FWK 144

BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.5e-40
Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 1

Query: 220 SSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDL 279
           ++  +A A + +EYLEKSKANKELNDKKRLATSGANFARAYTV+FGSC+FP NFTGCQDL
Sbjct: 20  TTTGSAKATIFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDL 79

Query: 280 AKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           AKQKKVPFISDDLE+ECEGK+K+KCGSNVFWK
Sbjct: 80  AKQKKVPFISDDLEIECEGKEKFKCGSNVFWK 111

BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24
Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 186 AIRAQQARVPEAK-----------NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYL 245
           A+RAQ A+V  A+           +   R  LL LG  L AAA A +   ANAGV+E+ L
Sbjct: 4   AMRAQCAKVQAARPARATTVVCRASAQSRRELLGLGVLLGAAALAPA---ANAGVVEDLL 63

Query: 246 EKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLEL 305
            KS ANK LN+KKRLATS AN AR+ TV  G+C+FPENF GC++LA  K V +I++DL++
Sbjct: 64  AKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKI 123

Query: 306 ECEGKDKYKCGS 307
           ECEGKD   CGS
Sbjct: 124 ECEGKDAKSCGS 132

BLAST of CmaCh07G008060 vs. TrEMBL
Match: A0A0A0KFM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483300 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.6e-80
Identity = 155/170 (91.18%), Postives = 166/170 (97.65%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEG 201
           MATMNSSVLACNYAISGAGSA+LNSKL+A  SVASPGV GYKLPAIRAQQ +VPEAKN+G
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQTKVPEAKNDG 60

Query: 202 RRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYT 261
           RRTALL+LGASLFAAAAA+SNS+ANAGVIE+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 262 VQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           V+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWK
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWK 170

BLAST of CmaCh07G008060 vs. TrEMBL
Match: G7JAX6_MEDTR (Photosystem I reaction center subunit N OS=Medicago truncatula GN=MTR_3g095540 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.8e-68
Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAK--- 201
           MA MNSSVLAC+YAISG+   ELN+KL +V S ASPGVSG KLP I+AQQ R+PEAK   
Sbjct: 1   MAAMNSSVLACSYAISGS---ELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESR 60

Query: 202 -NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFA 261
            ++GRR AL  L A+LF  A ++SNS+ANAGVIEEYLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  ASDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFA 120

Query: 262 RAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           RAYTVQFG+CKFPENFTGCQDLAKQKKVPFI++DLELECEGKDKYKCGSNVFWK
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWK 171

BLAST of CmaCh07G008060 vs. TrEMBL
Match: F6I0D9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01410 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.6e-67
Identity = 137/174 (78.74%), Postives = 156/174 (89.66%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAK--- 201
           MA++NSSVLACNYAISGAG+ ELNSKL ++ S ASP V+G KLPAIRAQQARV ++K   
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 202 -NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFA 261
             EGRR AL++L A+LF  AAAS  S+ANAGVI++YLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  AGEGRRAALVYLAATLFTTAAAS--SSANAGVIDDYLEKSKANKELNDKKRLATSGANFA 120

Query: 262 RAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           RAYTVQFG+CKFPENFTGCQDLAK+KKVPF+S+DLELECEG+DKYKCGSNVFWK
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWK 172

BLAST of CmaCh07G008060 vs. TrEMBL
Match: A0A061DJ27_THECC (Photosystem I reaction center subunit PSI OS=Theobroma cacao GN=TCM_001498 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 6.3e-66
Identity = 140/175 (80.00%), Postives = 152/175 (86.86%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSG-YKLPAIRAQQARVPEAK-- 201
           MA MNSSVLACNYAISG GS ELN+KL++V SVASP VSG  KLP IRAQQA+V + +  
Sbjct: 1   MAAMNSSVLACNYAISGTGSFELNAKLASVPSVASPVVSGGRKLPVIRAQQAKVSDPEES 60

Query: 202 --NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANF 261
             +EGRR A+L+L A+LF  AAASS   ANA V +EYLEKSKANKELNDKKRLATSGANF
Sbjct: 61  RASEGRRAAMLYLAATLFTTAAASS---ANASVFDEYLEKSKANKELNDKKRLATSGANF 120

Query: 262 ARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           ARAYTVQFG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK
Sbjct: 121 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 172

BLAST of CmaCh07G008060 vs. TrEMBL
Match: W9QUC7_9ROSA (Photosystem I reaction center subunit N OS=Morus notabilis GN=L484_020701 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 8.2e-66
Identity = 135/171 (78.95%), Postives = 149/171 (87.13%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEG 201
           MA MNSSVLACNYAISG G  EL+SK   VTS   P V+  K+P IRAQQA+  + K EG
Sbjct: 1   MAAMNSSVLACNYAISGTGMTELSSK---VTSACPPVVAAQKMPVIRAQQAKNSDRKTEG 60

Query: 202 RRTALLFLGASLF-AAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAY 261
           RR A+L+L A+LF  AA+A+SNS+ANAGVIEEYLEKSKANKELNDKKRLATSGANFARAY
Sbjct: 61  RRAAMLYLAATLFTTAASAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAY 120

Query: 262 TVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           TV+FG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDK+KCGSNVFWK
Sbjct: 121 TVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKFKCGSNVFWK 168

BLAST of CmaCh07G008060 vs. TAIR10
Match: AT1G60560.1 (AT1G60560.1 SWIM zinc finger family protein)

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42
Identity = 76/113 (67.26%), Postives = 96/113 (84.96%), Query Frame = 1

Query: 5   MTTELHSTYWLDRYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQ 64
           +TTELHS+YWLDRYADESDSFQNVK+EYI+STSW+RA++IPDS+VT+D+ N L A+V SQ
Sbjct: 506 LTTELHSSYWLDRYADESDSFQNVKEEYIASTSWYRAMEIPDSAVTLDENNILLAKVQSQ 565

Query: 65  KDRSVSHIVWNPGSEFSFCACSWSMQGNLCKHVIKVN-MIRSHGGTARVLSLR 117
           +D  V+ +VWNPGSEF+FC C+WS+QGNLCKH+IKVN M  +  G    +SLR
Sbjct: 566 RDSDVTRVVWNPGSEFAFCDCTWSLQGNLCKHIIKVNTMCENREGYGDSMSLR 618

BLAST of CmaCh07G008060 vs. TAIR10
Match: AT5G64040.2 (AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN))

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-41
Identity = 93/144 (64.58%), Postives = 112/144 (77.78%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKL-PAIRAQQARVPEAK-N 201
           MA MNSSVL C+YAI+G+GS ELN K+  V S    G     + P I+AQ+    +   +
Sbjct: 1   MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDVDGS 60

Query: 202 EGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 261
            GRR+A++FL A+LF+ AA S++  ANAGVI+EYLE+SK NKELNDKKRLATSGANFARA
Sbjct: 61  NGRRSAMVFLAATLFSTAAVSAS--ANAGVIDEYLERSKTNKELNDKKRLATSGANFARA 120

Query: 262 YTVQFGSCKFPENFTGCQDLAKQK 284
           +TVQFGSCKFPENFTGCQDLAKQK
Sbjct: 121 FTVQFGSCKFPENFTGCQDLAKQK 142

BLAST of CmaCh07G008060 vs. TAIR10
Match: AT4G13970.1 (AT4G13970.1 zinc ion binding)

HSP 1 Score: 91.7 bits (226), Expect = 8.8e-19
Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 1

Query: 7   TELHSTYWLDRYADESDSFQNVKDEYISS-TSWHRALQIPDSSVTMDDENHLFAEVLSQK 66
           T++HS +WLD Y+ + +  +  K+E++S  TS+ +AL IPDS V +     + A++  + 
Sbjct: 509 TKVHSYFWLDEYSGKDNFARYWKEEWVSGLTSFRKALSIPDSDVVISG---MSAKITDEC 568

Query: 67  DRSVSHIVWNPGSEFSFCACSWSMQGNLCKHVIKVNMIRSHGGTARVLSLRLDFLH-LFG 126
           D +  H+VWNPGS+F  C+CSW+ +G +CKH+IK+  +      AR  +  L +   L  
Sbjct: 569 DGNEIHVVWNPGSQFGVCSCSWAEKGYICKHMIKLTQLCLGNRAARQSASLLQYYQTLID 628

Query: 127 LLHY-PSDSDFVQKLQRVMATMNSSVLACNY 155
           LL   P DS F      +  ++   + A  Y
Sbjct: 629 LLRCPPHDSLFRDYAVSLAVSVEKQINALGY 656

BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|659080932|ref|XP_008441057.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-81
Identity = 158/170 (92.94%), Postives = 168/170 (98.82%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEG 201
           MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQARVPEAKNEG
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60

Query: 202 RRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYT 261
           RRTALL+LGA+LFAAAAA+SNS+ANAGVIE+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 262 VQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           V+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWK
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWK 170

BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|449461859|ref|XP_004148659.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 3.8e-80
Identity = 155/170 (91.18%), Postives = 166/170 (97.65%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEG 201
           MATMNSSVLACNYAISGAGSA+LNSKL+A  SVASPGV GYKLPAIRAQQ +VPEAKN+G
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQTKVPEAKNDG 60

Query: 202 RRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYT 261
           RRTALL+LGASLFAAAAA+SNS+ANAGVIE+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 262 VQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           V+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWK
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWK 170

BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|357464531|ref|XP_003602547.1| (photosystem I reaction center subunit N [Medicago truncatula])

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAK--- 201
           MA MNSSVLAC+YAISG+   ELN+KL +V S ASPGVSG KLP I+AQQ R+PEAK   
Sbjct: 1   MAAMNSSVLACSYAISGS---ELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESR 60

Query: 202 -NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFA 261
            ++GRR AL  L A+LF  A ++SNS+ANAGVIEEYLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  ASDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFA 120

Query: 262 RAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           RAYTVQFG+CKFPENFTGCQDLAKQKKVPFI++DLELECEGKDKYKCGSNVFWK
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWK 171

BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|359476926|ref|XP_003631913.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Vitis vinifera])

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 137/174 (78.74%), Postives = 156/174 (89.66%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAK--- 201
           MA++NSSVLACNYAISGAG+ ELNSKL ++ S ASP V+G KLPAIRAQQARV ++K   
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 202 -NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFA 261
             EGRR AL++L A+LF  AAAS  S+ANAGVI++YLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  AGEGRRAALVYLAATLFTTAAAS--SSANAGVIDDYLEKSKANKELNDKKRLATSGANFA 120

Query: 262 RAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           RAYTVQFG+CKFPENFTGCQDLAK+KKVPF+S+DLELECEG+DKYKCGSNVFWK
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWK 172

BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|743861697|ref|XP_011031185.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Populus euphratica])

HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66
Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = 1

Query: 142 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAK--- 201
           MA MNSSVLACNYAISG GS+ELN+K+ ++ +VASP VSG KLP IRAQQAR    +   
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPVIRAQQARADSKEMKA 60

Query: 202 NEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFAR 261
           +EGRR AL++L A+LF +AAA+  S+ANAGVIE+YLEKSKANKELNDKKRLATSGANFAR
Sbjct: 61  SEGRRDALVYLAATLFTSAAAA--SSANAGVIEDYLEKSKANKELNDKKRLATSGANFAR 120

Query: 262 AYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK 312
           AYTVQFG+CKFPENFTGCQDLAKQKKVPFISDDL LECEGKDKYKCGSNVFWK
Sbjct: 121 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWK 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSAN_ARATH5.9e-5768.60Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana G... [more]
PSAN_HORVU1.3e-4376.42Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSA... [more]
PSAN_MAIZE6.5e-4082.61Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN... [more]
PSAN_VOLCA3.8e-2452.27Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN... [more]
Match NameE-valueIdentityDescription
A0A0A0KFM1_CUCSA2.6e-8091.18Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483300 PE=4 SV=1[more]
G7JAX6_MEDTR8.8e-6879.31Photosystem I reaction center subunit N OS=Medicago truncatula GN=MTR_3g095540 P... [more]
F6I0D9_VITVI2.6e-6778.74Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01410 PE=4 SV=... [more]
A0A061DJ27_THECC6.3e-6680.00Photosystem I reaction center subunit PSI OS=Theobroma cacao GN=TCM_001498 PE=4 ... [more]
W9QUC7_9ROSA8.2e-6678.95Photosystem I reaction center subunit N OS=Morus notabilis GN=L484_020701 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT1G60560.13.3e-4267.26 SWIM zinc finger family protein[more]
AT5G64040.28.2e-4164.58 photosystem I reaction center subunit PSI-N, chloroplast, putative /... [more]
AT4G13970.18.8e-1933.77 zinc ion binding[more]
Match NameE-valueIdentityDescription
gi|659080932|ref|XP_008441057.1|2.0e-8192.94PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo][more]
gi|449461859|ref|XP_004148659.1|3.8e-8091.18PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis sativ... [more]
gi|357464531|ref|XP_003602547.1|1.3e-6779.31photosystem I reaction center subunit N [Medicago truncatula][more]
gi|359476926|ref|XP_003631913.1|3.7e-6778.74PREDICTED: photosystem I reaction center subunit N, chloroplastic [Vitis vinifer... [more]
gi|743861697|ref|XP_011031185.1|4.1e-6679.19PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Populus ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM
IPR008796PSAN
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009522photosystem I
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0008150 biological_process
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0005575 cellular_component
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G008060.1CmaCh07G008060.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROFILEPS50966ZF_SWIMcoord: 68..105
score: 8
IPR008796Photosystem I reaction centre subunit N, chloroplasticGENE3DG3DSA:4.10.1190.10coord: 228..311
score: 1.4
IPR008796Photosystem I reaction centre subunit N, chloroplasticPFAMPF05479PsaNcoord: 185..311
score: 3.3
NoneNo IPR availablePANTHERPTHR36814FAMILY NOT NAMEDcoord: 143..311
score: 8.0