CmaCh07G008060 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCAACATTTATAAAGATTTATGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGGTTTCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTTTCTGATGAGCAACCAGACAGCCAAATTTATTTAGGAGGTTAGTTGTTGCATTCAGAATTCAAGTTTCTAGCCGAAATTCGTTTTGCCTGATGCTATGTAAGAACCTGTACAAGATAATTGCTGCGAAATTTTGGTATTTTTCTGATTTTCTTGTTTCTCCATTATGATTTATGGGTTTTGTTTACTGTAGCTCATGTCTGGGAATTCTTAGTATGGGATATTGGCATTTGATTCAAACTTAAAAGTCTGTGTGATTGATTATGACCAACGGACTGCTTTTCTTGTAAAAACATCTTATGAAGTGATTGATTTCTTTTAGGAGTGATAGTGTTAAATTTCATCGAAATGTTTCAGGACGCCTTTGGTTGAAAGGAGAAGGAAAAAATAAGAATAATGTTTAAGCGGAAAGAAGAAAGCATACTCCATTAGTTCTTAAATCATTCAACATCTTAATAGAATTGACAGCCGAAAGCCATGTACATTAGTGAAGAGTATATGTAATACGAAACTGTGATATCTAAGAACTCAAATTATAGTGAGATGATACCCAAATGATGCCTGACGTAGATAATGATAGTTCTTCTATTCAAACTAATCCTTTCACTAATTCTTCCCATAATGAGTATGGTATTCTGGACATTTTTTTTGGTTTATATTGAATCCTGGAAGAAATACATATTGTTCTTCACTCTTTGACAAGAAAATGTAGTGTGTATATTCGTGAATTATCGCTCTCTTAATTTTTGCGACTGCTTGTGAGTTATGATTATACAATTGTTGAGTCACATTCTACCATGCCTGTATTTTGCAGATAGCTAGGAATTGGACTTTGTAGCTTCATTTTGATGGCTATTGTTGAATCCATACTTGATCTTCAGGTACAAGATCCACCTGAGGAAGAGTTCTATTCTGCTGATTTGACTTGGACCAAGTTTGGCAATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGGTATGTGAAAATTGTCCAAGTTACAAACCTTCCATATCTTTTCAATCATTTGAGAAGATATTGATGAATATGTGGAAAATACCAATGGATGATTCTGTTTCCTTGGACCCATCAAATTCTGGATGAAATTCAGAAACTAGTTGAATGGAGTTCTTCAAATGATATAAGCTCTGTGGTAAATAAGCTGCCCTTGAAATGGGGTTCTGGGAAGGGAAGAACCAGTTTTAGGAAGCCATCATCTATCATGGCTGTTCCATCGGTGTCCAATTCTGTCAGAAAGGCCATGCCAAGGAACCGGAAAAGGAAAAGATTGTCCAGACCAAGATAGCTTGCCCAGCTTGTTTGCTATTTTATTTCCATTGGGCTCTTTTCAATACCTTGATCTCAATTTATATGATTGTTATATAAGATTTGGTGGCTTGTTGAGTAACTTAAGATTGAAGTATGATCATTTTACAAACACACCCAAGATTAACTGGACTTTGCATTTGTTATGGCATGTAGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACGTTTACATAATTTATGTTTCATCTTTTTCAGATCGTTAGATACACTTCTATTTTACGAGTTGATGCTTCTGAATTCTGCAGGAATGTGTATATAGAAACTGTTAAATAAGATCAGTTCAAGTACTTGTTCATTTTAGGTAGCTAGTGTATGAGTAGAATTGATTTTGGGCAGTGTAACAGCCAGCAGATATGACTTTCTTTGGGGGCTTTCCCTTTGAGGCTTCTTCTCACGGTTTTAAAATGCATTTGCTCAAAGAGAGGTTTCTACACTCTTATAAAAAATGTTTCGTTTCCCCCCTCCGACCAATGTGGGATCTCACAATTCACCCCTTTGGGGGCCAGCGTCCTCGTTGACACGTAACGGACCAAAACAGACAATATCTGCTAGCGGTGGGTTTGAGGTATTGTTATAAGTAACTACTCCAGAAACTGTACCTCTGATTTTACCATGGCAAATTGCCGTAGCTTTTTGCCATCATGTATTGAAGGGAACACAGATCATGTACTAATTAGATATCTGTACTACTTACATTCAATCTGAAAATAAAGTCAAAATGTTTCTAGCCGTGTATGTTGATTCTTTGATTCAATAACTAGCTCCAGCAAATGGCATTGAATGATGAAAGTTGTGCCAATATATATGATAATTTTTTCTGCACTTAATTGAACATTTTAATCTTAATCTTAGGCTTAAAAGTTAAAGAAAATTAGTAGTTTTTTTTAGTATAATTTAAGAACAATTTTGGAAGTTTTAGAGCCATTCTAGTTTAACCGATTTAACTAAAATTCAATTTGCTTGAACGTTCCCCATCACGTTTAGATTTCGAAGTGGGTCCAAAATTGAAGCTCGCCACACACATTTTCATGTCCAAAAAACCCTAATCACAGCCATGGATTGCCAATTGGGAGTGAGGAAATCTCACCTTATCCACACTCTCACCACAATTCCTTATCCAATTCCATCTCAGACGTCGTTCATTTATCAGATTCCCTCATAATCCCATTTCCCTATTAACAACTCTCCACCATTAATCCTCCTCCTTCGAGCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGTAAGCTACTCTTTGCTATCCAGATTATTCATGAACATTCAAATTGCTTTTTCATTTAGTTTTAGATCCTATTTCGGTCTATGAACTCTATTCCATTTAATATACTTCAAATGCTCTGTTTCGATTCTTTGACTTGGCATATTAACGAGTCTTGTTCTTGATTCCTTTACTTAGCTCAAAAGTGTGTTTGGTTCTGGTTGTTGCTAAAATAAATTGTCCTCTTTCGGCTTTCCCTTTCGAGCTTTTCTTCAAAGTTTTCAAAACGTGTCGGTTGGTAAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAATCGACATGGGATCCACATACATTTCAAAAGTGAATGAAACAGAATTTTGTCAATTGGATGGTAAACCAACCGATCATGTTCTTAACTCTGTTATTGCAACAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGGTATGAACCTTCATTGCTTAGTTATAATCACTGTTGGCTGTGAAATTTTGAGTACAAGTAAATGTGTTTATGTTAAGCACTAAGTTAGTTCTCTGTCCTGCTTTTGATGAATGCAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGAAGAGAACAGAACAATTTATTAAAGTCTTTGTATCTAATTTTCAACTTTTAGTAAGTGTGAAATTTTATCAAGTCCAATTCCATTGCTTTCTTTCTTCTCTTTCAGACCAAAATAAACCAAATGAGAAAGTAGAAACCCTAGAAATCTTTTTCTTTAGCTATGTTAATGTTAATGTTTCGGGAAGGTTACTAAATATATATTTAATAGTCAATTTGAGCATAACTCAATACAGAAAATACCAATTTTACTGATAGATAATTCGATCTACGCTCCTATCATTGTTAAACAAATGTATATAGTGAGTTGTGTCTAAATCCAAGAAGAGATGTTTAAGTTCATTCAAAATTCTAGAAAGAAAAACGTTTTGGGACAAAGTTCGAACTTAAAATGGTATTGTTGGAGCATCGTTTAGTCGAAATTAACGACTTGATTTAGATTGTTAACTATGTTTTTATGTTCGAAAGGTCAAATTGTGCGAGTGGATAAAGTTTTATGGATTCTTTTTGTGGCTATCAATGACGTTTTTTGCAAATCAAGCTAAAAAAAACGAGAAATTAACCTGCAGTGCACTACACTTGGTGTCGGTGTCACGGTGTAGTAATAAACAAAAACTGATTATTACATGTACAGACCACCTTTCCTTTACAAGAACCAAAAAAATATTGTTATACCTCACAAGATTTCTCTAAGAAAATACATCATATCCCCATTGCTTAAGAAAGCTTTATCCCATTCCCACCATCGTCCATTCATCAATAACTCAAATCTCTCCGATACACAATGGATAAATTTACACCTGAGGATACGAGGAAGATGTCTTTTTCTTCTTTTTCATTAA AGCAACATTTATAAAGATTTATGGAATTTTTTTTGTTCTAAATTGTTCAAGAAATTGCTTGGTTTCTTACGAACATCTTCTTCCTTCGAACTCTTTTCTTGCTTCACCGTGACCGCCCGCTTCAAATCAAGAACTTTCTGATGAGCAACCAGACAGCCAAATTTATTTAGGAGATAGCTAGGAATTGGACTTTGTAGCTTCATTTTGATGGCTATTGTTGAATCCATACTTGATCTTCAGGTACAAGATCCACCTGAGGAAGAGTTCTATTCTGCTGATTTGACTTGGACCAAGTTTGGCAATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGACCACCTTTCCTTTACAAGAACCAAAAAAATATTGTTATACCTCACAAGATTTCTCTAAGAAAATACATCATATCCCCATTGCTTAAGAAAGCTTTATCCCATTCCCACCATCGTCCATTCATCAATAACTCAAATCTCTCCGATACACAATGGATAAATTTACACCTGAGGATACGAGGAAGATGTCTTTTTCTTCTTTTTCATTAA ATGTCGAACACCATGACCACTGAGTTGCATTCGACCTATTGGCTAGATCGCTATGCTGATGAAAGTGACTCGTTTCAAAATGTCAAGGATGAGTATATTTCTTCTACTTCTTGGCACCGTGCTTTGCAAATTCCGGATTCTTCAGTTACCATGGATGATGAGAATCACCTTTTTGCCGAAGTTTTGAGCCAAAAGGACAGAAGTGTTTCACATATAGTGTGGAATCCAGGGTCAGAATTCTCATTTTGTGCTTGTTCTTGGTCAATGCAAGGAAATCTTTGCAAACACGTGATCAAGGTGAATATGATCCGTTCACATGGAGGCACTGCTCGAGTCTTGTCGTTGAGGTTAGACTTCTTACACCTCTTTGGCCTTCTGCACTACCCTTCGGACTCGGATTTTGTACAAAAGTTGCAGAGAGTAATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTCTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTACGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGA MSNTMTTELHSTYWLDRYADESDSFQNVKDEYISSTSWHRALQIPDSSVTMDDENHLFAEVLSQKDRSVSHIVWNPGSEFSFCACSWSMQGNLCKHVIKVNMIRSHGGTARVLSLRLDFLHLFGLLHYPSDSDFVQKLQRVMATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWK
BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2) HSP 1 Score: 222.6 bits (566), Expect = 5.9e-57 Identity = 118/172 (68.60%), Postives = 139/172 (80.81%), Query Frame = 1
BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.3e-43 Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 1
BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 6.5e-40 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 1
BLAST of CmaCh07G008060 vs. Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24 Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TrEMBL
Match: A0A0A0KFM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483300 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.6e-80 Identity = 155/170 (91.18%), Postives = 166/170 (97.65%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TrEMBL
Match: G7JAX6_MEDTR (Photosystem I reaction center subunit N OS=Medicago truncatula GN=MTR_3g095540 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 8.8e-68 Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TrEMBL
Match: F6I0D9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01410 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.6e-67 Identity = 137/174 (78.74%), Postives = 156/174 (89.66%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TrEMBL
Match: A0A061DJ27_THECC (Photosystem I reaction center subunit PSI OS=Theobroma cacao GN=TCM_001498 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.3e-66 Identity = 140/175 (80.00%), Postives = 152/175 (86.86%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TrEMBL
Match: W9QUC7_9ROSA (Photosystem I reaction center subunit N OS=Morus notabilis GN=L484_020701 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 8.2e-66 Identity = 135/171 (78.95%), Postives = 149/171 (87.13%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TAIR10
Match: AT1G60560.1 (AT1G60560.1 SWIM zinc finger family protein) HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42 Identity = 76/113 (67.26%), Postives = 96/113 (84.96%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TAIR10
Match: AT5G64040.2 (AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)) HSP 1 Score: 164.9 bits (416), Expect = 8.2e-41 Identity = 93/144 (64.58%), Postives = 112/144 (77.78%), Query Frame = 1
BLAST of CmaCh07G008060 vs. TAIR10
Match: AT4G13970.1 (AT4G13970.1 zinc ion binding) HSP 1 Score: 91.7 bits (226), Expect = 8.8e-19 Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 1
BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|659080932|ref|XP_008441057.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]) HSP 1 Score: 311.2 bits (796), Expect = 2.0e-81 Identity = 158/170 (92.94%), Postives = 168/170 (98.82%), Query Frame = 1
BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|449461859|ref|XP_004148659.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis sativus]) HSP 1 Score: 307.0 bits (785), Expect = 3.8e-80 Identity = 155/170 (91.18%), Postives = 166/170 (97.65%), Query Frame = 1
BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|357464531|ref|XP_003602547.1| (photosystem I reaction center subunit N [Medicago truncatula]) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 138/174 (79.31%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|359476926|ref|XP_003631913.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Vitis vinifera]) HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67 Identity = 137/174 (78.74%), Postives = 156/174 (89.66%), Query Frame = 1
BLAST of CmaCh07G008060 vs. NCBI nr
Match: gi|743861697|ref|XP_011031185.1| (PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Populus euphratica]) HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66 Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |