CmaCh04G005060 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G005060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNeurofilament heavy polypeptide
LocationCma_Chr04 : 2578370 .. 2579783 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATAATAATAAGAAGAGAAAGAAGTCCTAATTTGGCCTTCTTTCTCTCCAACATCTTCCTCTCTCTCCCTTCTAAACATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGACAAGAAGGAAGGCGTCCTCGTCCCTACCTCTGCTCCCGTTCTTGTTGTCGAGGAGACTGCAAGGAAGGAAGCAACATCGAAGAAGGAGAAGGATGTGAAGGTCGAAAATCGACAAAGAAAGTTTGATGATGATGAAGCTAATGAGAAGGTTGAGGTATACAAGAATTTCAATGGACCCTTTTGTTCTTATTTTGATACCAAATTTGAACTTTAGTCCTATGCTGCTCTATCAACCGGTGACATTATCCTTATTTTAATAGCAAACTCGTGACACGAATATTTTCAGTGATTTGCTCTACCAATTTTAATGGTTAATTCAATAGCTATACCTGCCATTTCATTTCAGTTCTTTATTTCCTAACTTCAGATTCATGGCCGTGTCTTTTCTTAGGGCAAAGCAACCGAAGAAGCAATCGAGGACAAAAAAGAAAAGCCTAAAGAAGACGCCAAGGTTCAAGCAGCATCGCCTGTAGCCACCACTGCCGCACCTGCGCTGCTCGAAGACAAAAATGCCGCCGTCGAAGTAGCGCCTGTCGTGCCTAAGAAACCCACCGTCGAGGCGCCGGTAGCAGACGGAAAACCCGCCGTCGAGGCGCCGGTAGCGGCCGAGAAACCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCTGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCGGCAGCATCAACAGCAGTGGCAGCGGATCATAAACATTAG

mRNA sequence

CTCATAATAATAAGAAGAGAAAGAAGTCCTAATTTGGCCTTCTTTCTCTCCAACATCTTCCTCTCTCTCCCTTCTAAACATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGACAAGAAGGAAGGCGTCCTCGTCCCTACCTCTGCTCCCGTTCTTGTTGTCGAGGAGACTGCAAGGAAGGAAGCAACATCGAAGAAGGAGAAGGATGTGAAGGTCGAAAATCGACAAAGAAAGTTTGATGATGATGAAGCTAATGAGAAGGTTGAGGGCAAAGCAACCGAAGAAGCAATCGAGGACAAAAAAGAAAAGCCTAAAGAAGACGCCAAGGTTCAAGCAGCATCGCCTGTAGCCACCACTGCCGCACCTGCGCTGCTCGAAGACAAAAATGCCGCCGTCGAAGTAGCGCCTGTCGTGCCTAAGAAACCCACCGTCGAGGCGCCGGTAGCAGACGGAAAACCCGCCGTCGAGGCGCCGGTAGCGGCCGAGAAACCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCTGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCGGCAGCATCAACAGCAGTGGCAGCGGATCATAAACATTAG

Coding sequence (CDS)

ATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGACAAGAAGGAAGGCGTCCTCGTCCCTACCTCTGCTCCCGTTCTTGTTGTCGAGGAGACTGCAAGGAAGGAAGCAACATCGAAGAAGGAGAAGGATGTGAAGGTCGAAAATCGACAAAGAAAGTTTGATGATGATGAAGCTAATGAGAAGGTTGAGGGCAAAGCAACCGAAGAAGCAATCGAGGACAAAAAAGAAAAGCCTAAAGAAGACGCCAAGGTTCAAGCAGCATCGCCTGTAGCCACCACTGCCGCACCTGCGCTGCTCGAAGACAAAAATGCCGCCGTCGAAGTAGCGCCTGTCGTGCCTAAGAAACCCACCGTCGAGGCGCCGGTAGCAGACGGAAAACCCGCCGTCGAGGCGCCGGTAGCGGCCGAGAAACCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAATGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCTGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCAAAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGGGGCCCCGGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAGCCCGCCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCGTCGTCGAGACACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCGGCAGCATCAACAGCAGTGGCAGCGGATCATAAACATTAG

Protein sequence

MGGCTSKPKTMDKKEGVLVPTSAPVLVVEETARKEATSKKEKDVKVENRQRKFDDDEANEKVEGKATEEAIEDKKEKPKEDAKVQAASPVATTAAPALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAAEKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVEAKKPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPVVETPVEAEKPVVETPVEAEKPTIKVPGEAKEPSVEAAAAASTAVAADHKH
BLAST of CmaCh04G005060 vs. Swiss-Prot
Match: MAP6_HUMAN (Microtubule-associated protein 6 OS=Homo sapiens GN=MAP6 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 75/242 (30.99%), Postives = 121/242 (50.00%), Query Frame = 1

Query: 110 PVVPKK--PTVEAPVADGKPAVEAPVAAEKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVE 169
           PV PK   P V A V D    V   +  + P +  PV+ + P V APV+   P V A V+
Sbjct: 534 PVPPKNQSPMVPAKVKDQGSVVPESLKDQGPRIPEPVKNQAPMVPAPVKDEGPMVSASVK 593

Query: 170 AMKPAVEAPVEAMKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPA 229
              P V APV+   P V APV+ + P V APV+ + P V AP++ + P V    + +   
Sbjct: 594 DQGPMVSAPVKDQGPIVPAPVKGEGPIVPAPVKDEGPMVSAPIKDQDPMVPEHPKDESAM 653

Query: 230 VEAPVEAKKPAVGAPVEAKKPAVGAPVEAKKPAVGAPVEAEKPAVGAPVEAEKPAVETPV 289
             AP++ +   V  PV+ +   V  PV+ +   V    +    AV APV+ + P V   V
Sbjct: 654 ATAPIKNQGSMVSEPVKNQGLVVSGPVKDQDVVVPEHAKVHDSAVVAPVKNQGPVVPESV 713

Query: 290 EAEKPAVETPVEAEKPAVETPVEAEKPVVETPVEAEKPVVETPVEAEKPTIKVPGEAKEP 349
           + + P +   V+ + P V  P + +  +V  P++ + P+V  P++ + P + VP + + P
Sbjct: 714 KNQDPILPVLVKDQGPTVLQPPKNQGRIVPEPLKNQVPIVPVPLKDQDPLVPVPAKDQGP 773

BLAST of CmaCh04G005060 vs. TrEMBL
Match: A0A0D2KA06_9CHLO (Component of oligomeric golgi complex 4 OS=Monoraphidium neglectum GN=MNEG_0841 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 124/280 (44.29%), Postives = 151/280 (53.93%), Query Frame = 1

Query: 76  EKPKEDAKVQAASPVATTAAPALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAA 135
           ++P++ A + A     T A PA         +  PV   KP  + P+A  KPA + PVAA
Sbjct: 128 QQPQQAAAMPAQQQPGTVAKPA---------QQQPVAAAKPAQQQPMASAKPAQQQPVAA 187

Query: 136 EKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAV 195
             PA    V A KPA + PV A KPA + PV A KPA + P+ A KPA + PV A KPA 
Sbjct: 188 AMPAQHPTVAAAKPAQQQPVAAAKPAQQQPVAAAKPAQQQPMAAAKPAQQPPVAAAKPAQ 247

Query: 196 EAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVE 255
             P  A KPA + PV A KPA + PV + KPA + PV A KPA    V A KPA   P  
Sbjct: 248 PRPAAAAKPAQQQPVAAAKPAQQQPVASAKPAQQQPVAAAKPAQHPTVAAAKPAQQQPTA 307

Query: 256 AKKPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPV 315
           A KPA    V A KPA   P+ A KPA + PV   KPA + PV A KPA + PV A KP 
Sbjct: 308 AAKPAQHPTVAAAKPAQQQPMAAAKPAQQPPVAGAKPAQQQPVAAAKPAQQQPVVAAKPA 367

Query: 316 VETPVEAEKPVVETPVEAEKPTIKVPGEAKEPSVEAAAAA 356
            + PV A KP  + PV A KP  + P  A +P+V  A  A
Sbjct: 368 QQQPVAAAKPAQQQPVAAVKPAQQQPVAAAKPAVTQALQA 398

BLAST of CmaCh04G005060 vs. TrEMBL
Match: A0A0P6CKR7_9CRUS (Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24
Identity = 99/237 (41.77%), Postives = 130/237 (54.85%), Query Frame = 1

Query: 127 PAVEAPVAAEKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEA 186
           PA E P+ A+ PA E P +AK PA E P++A  PA E P++   PA E P++A  PA E 
Sbjct: 406 PAKETPIQAKTPAKETPTQAKTPAKEPPIQAKPPAKETPIQVKTPAKETPIQAKTPAKEN 465

Query: 187 PVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAK 246
           P++AK PA E P++ K PA E P +AK PA E P++AK P  E P++AK P    P++AK
Sbjct: 466 PIQAKNPAKETPIQPKTPAKETPNQAKTPAKETPIQAKTPPKETPIQAKTPPKETPIQAK 525

Query: 247 KPAVGAPVEAKKPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVE 306
            PA   P++AK P  G P +A+ PA   P +A+ PA ET      PA ETP  A+ PA E
Sbjct: 526 TPAKETPIQAKTPVKGTPSQAKTPAKLTPTQAKIPARET----RTPAKETPTAAKTPAKE 585

Query: 307 TPVEAEKPVVETPVEAEKPVVE------TPVEAEKPTIKVPGEAKEPSVEAAAAAST 358
            P+ A  P  E P   + P  +      T   A   T K P  A+    E  AA  T
Sbjct: 586 KPIPATTPAKEMPAPVKTPAKDKTTAKATGSPAPVKTPKEPSSAETLVKETTAAVKT 638

BLAST of CmaCh04G005060 vs. TrEMBL
Match: E3LUM9_CAERE (Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_31104 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.5e-21
Identity = 105/273 (38.46%), Postives = 114/273 (41.76%), Query Frame = 1

Query: 78   PKEDAKVQAASPVATTAAPALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAAEK 137
            P ++A  + A+PV  T A     ++ A V+  P V   P  E PV    P  E P     
Sbjct: 3243 PVQEASAEQAAPVPETPA-----EQAAPVQETPAVQAAPVPETPVEQPVPVQETPAEQAA 3302

Query: 138  PAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAVEA 197
            P  E P E   P  E PVE   P  + P E   P  E P E   P  E PVE   P  E 
Sbjct: 3303 PVKETPAEQAAPVPETPVEQPVPVQQTPAEQAAPIKETPAEQAAPVPETPVEQPVPVQET 3362

Query: 198  PVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVEAK 257
            P E   P  E P E   P  E PVE   P  EAP E   P    PVE   P    P E  
Sbjct: 3363 PAEQAAPVKETPAEQVAPVTETPVEQPVPVQEAPAEQAAPVPETPVEQPVPVQETPAEQA 3422

Query: 258  KPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPVVE 317
             P    P E   P    PVE   P  ETP E   P  ETP E   PA ETPVE   PV E
Sbjct: 3423 APVKETPAEQAAPVPETPVEQPVPVQETPAEQAAPVQETPAEQAAPAPETPVEQPVPVQE 3482

Query: 318  TPVEAEKPVVETPVEAEKPTIKVPGEAKEPSVE 351
            TP E   PV ETP E   P  + P E   P  E
Sbjct: 3483 TPAEQAAPVKETPAEQAAPVTETPVEQPVPVQE 3510

BLAST of CmaCh04G005060 vs. TrEMBL
Match: L5JW61_PTEAL (Fibrous sheath CABYR-binding protein OS=Pteropus alecto GN=PAL_GLEAN10013614 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-15
Identity = 78/216 (36.11%), Postives = 97/216 (44.91%), Query Frame = 1

Query: 138 PAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAVEA 197
           P  EAP E + P  EAP E   P  EAP E   P  EAP E   P  +AP E + P  + 
Sbjct: 9   PPAEAPSEVRPPPAEAPSELQPPPSEAPSELQPPPSEAPSEIQPPPAKAPSEVQPPPAKV 68

Query: 198 PVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVEAK 257
           P E + P  EA  E + P  + P E + P  EAP E + P   AP E + P   AP E +
Sbjct: 69  PSEVRPPPAEATSEVRPPTAKVPSEVRPPPAEAPTEIQPPPAEAPSEVRTPVTEAPSEVR 128

Query: 258 KPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPVVE 317
            P   AP E   P+  AP E + P  E P E   P  E   E   P  E P E + P  E
Sbjct: 129 PPLAEAPSEVRSPSAEAPSEVQPPPTEVPSEVRPPPAEASSEVRSPPAEAPSEIQTPPPE 188

Query: 318 TPVEAEKPVVETPVEAEKPTIKVPGEAKEPSVEAAA 354
            P E   P    P E + P  + P E +    EA++
Sbjct: 189 VPSEVRPPPAGAPSEIQPPPAEAPSEVRPLPAEASS 224

BLAST of CmaCh04G005060 vs. TrEMBL
Match: M3J1S2_CANMX (Uncharacterized protein OS=Candida maltosa (strain Xu316) GN=G210_3979 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15
Identity = 123/304 (40.46%), Postives = 131/304 (43.09%), Query Frame = 1

Query: 84  VQAASPVATTAAPALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAAEKPAVEAP 143
           + +   V TT  P L E+    VE        P  E PV +  PAVE       PAVE P
Sbjct: 643 ITSEETVYTTFCP-LTEESTTPVET-------PATEVPVEESTPAVEETT----PAVETP 702

Query: 144 V-EAKKPAVEA-PVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAVEAPVEA 203
             E   PA E+ P E   PAVE P E   PAVE PVE        P E   PAVE     
Sbjct: 703 ATEESTPAQESTPAEETTPAVETPAEETTPAVETPVETPATEETTPAEESTPAVET---- 762

Query: 204 KKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVEAKKPAV 263
             PAVE P E   PAVE P   + PA E       PAV  PVE   PA   PVE   PAV
Sbjct: 763 -TPAVETPAEETTPAVETPATEETPATEETT----PAVETPVEETTPAEETPVEETTPAV 822

Query: 264 GAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVE------AEKPV 323
             PVE   PA   PV+   PAVETP        ETPVE   PAVETPVE      A  P 
Sbjct: 823 ETPVEESTPATEVPVQETTPAVETPA-----TEETPVEETTPAVETPVETPATTPATTPA 882

Query: 324 VETPVE---------------AEKPVVETPVEA----EKPTIKVPGE------AKEPSVE 355
            ET VE                E P  E PVE     E P  + P E      A E SVE
Sbjct: 883 TETSVETPATGCVGEGCEVAPVETPATEAPVETPATEETPATEAPAETPIETPATEASVE 920

BLAST of CmaCh04G005060 vs. NCBI nr
Match: gi|926797099|ref|XP_013906122.1| (component of oligomeric golgi complex 4 [Monoraphidium neglectum])

HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 124/280 (44.29%), Postives = 151/280 (53.93%), Query Frame = 1

Query: 76  EKPKEDAKVQAASPVATTAAPALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAA 135
           ++P++ A + A     T A PA         +  PV   KP  + P+A  KPA + PVAA
Sbjct: 128 QQPQQAAAMPAQQQPGTVAKPA---------QQQPVAAAKPAQQQPMASAKPAQQQPVAA 187

Query: 136 EKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAV 195
             PA    V A KPA + PV A KPA + PV A KPA + P+ A KPA + PV A KPA 
Sbjct: 188 AMPAQHPTVAAAKPAQQQPVAAAKPAQQQPVAAAKPAQQQPMAAAKPAQQPPVAAAKPAQ 247

Query: 196 EAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVE 255
             P  A KPA + PV A KPA + PV + KPA + PV A KPA    V A KPA   P  
Sbjct: 248 PRPAAAAKPAQQQPVAAAKPAQQQPVASAKPAQQQPVAAAKPAQHPTVAAAKPAQQQPTA 307

Query: 256 AKKPAVGAPVEAEKPAVGAPVEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPV 315
           A KPA    V A KPA   P+ A KPA + PV   KPA + PV A KPA + PV A KP 
Sbjct: 308 AAKPAQHPTVAAAKPAQQQPMAAAKPAQQPPVAGAKPAQQQPVAAAKPAQQQPVVAAKPA 367

Query: 316 VETPVEAEKPVVETPVEAEKPTIKVPGEAKEPSVEAAAAA 356
            + PV A KP  + PV A KP  + P  A +P+V  A  A
Sbjct: 368 QQQPVAAAKPAQQQPVAAVKPAQQQPVAAAKPAVTQALQA 398

BLAST of CmaCh04G005060 vs. NCBI nr
Match: gi|1020967067|ref|XP_016159504.1| (PREDICTED: microtubule-associated protein 6-like [Ficedula albicollis])

HSP 1 Score: 134.0 bits (336), Expect = 5.2e-28
Identity = 83/254 (32.68%), Postives = 155/254 (61.02%), Query Frame = 1

Query: 96  PALLEDKNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAAEKPAVEAPVEAKKPAVEAPV 155
           P  +E  N  + V P+  KKP +  P+    P +  P+ ++ P +  P+E+KKP +  P+
Sbjct: 9   PDPMESINPKIPV-PMESKKPKIPDPMESIDPKISVPMESKNPKIPVPMESKKPKIPDPM 68

Query: 156 EAMKPAVEAPVEAMKPAVEAPVEAMKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKP 215
           E++ P +  P+E+  P +  P+E+ KP +  P+E+  P +  P+E+K P +  P+E+KKP
Sbjct: 69  ESIDPKISVPMESKNPKIPVPMESKKPKIPDPMESIDPKISVPMESKNPKIPVPMESKKP 128

Query: 216 AVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKPAVGAPVEAKKPAVGAPVEAEKPAVGAP 275
            +  P+E+  P +  P+E+K P +  P+E+KKP +  P+E+  P +  P+E++ P +  P
Sbjct: 129 KIPDPMESIDPKISVPMESKNPKIPVPMESKKPKIPDPMESIDPKISVPMESKNPKIPVP 188

Query: 276 VEAEKPAVETPVEAEKPAVETPVEAEKPAVETPVEAEKPVVETPVEAEKPVVETPVEAEK 335
           +E++KP +  P+E+  P +  P+E++ P +  P+E++KP +  P+E+  P +  P+E++ 
Sbjct: 189 MESKKPKIPDPMESIDPKISVPMESKNPKIPVPMESKKPKIPDPMESIDPKISVPMESKN 248

Query: 336 PTIKVPGEAKEPSV 350
           P I VP E+K+P +
Sbjct: 249 PKIPVPMESKKPKI 261

BLAST of CmaCh04G005060 vs. NCBI nr
Match: gi|917274005|ref|WP_051880717.1| (hypothetical protein [Buttiauxella agrestis])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 89/241 (36.93%), Postives = 129/241 (53.53%), Query Frame = 1

Query: 110 PVVPKKPTVEAPVADGKPAVEAPVAAEKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAM 169
           PV  + P V+ PV +  P V+ PV  + P V+ PV  + P V+ PV    P V+ PV   
Sbjct: 190 PVPEQPPVVDTPVPEHPPVVDTPVPEQPPVVDTPVPEQPPVVDTPVPEQPPVVDTPVPEQ 249

Query: 170 KPAVEAPVEAMKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVE 229
            P V+ PV    P ++ PV  + P V+ PV  + P V+ PV  + P V+ PV  + P V+
Sbjct: 250 PPVVDTPVPEQPPVIDTPVPEQPPVVDTPVPEQPPVVDTPVPEQPPVVDTPVPEQPPVVD 309

Query: 230 APVEAKKPAVGAPVEAKKPAVGAPVEAKKPAVGAPVEAEKPAVGAPVEAEKPAVETPVEA 289
            PV    P +  PV  + P V  PV  + P V  PV  + P +  PV  + P V+TPV  
Sbjct: 310 TPVPEWPPVIDTPVPEQPPVVDTPVPEQPPVVDTPVPEQPPVIDTPVPEQPPVVDTPVPE 369

Query: 290 EKPAVETPVEAEKPAVETPVEAEKPVVETPVEAEKPVVETPVEAEKPTIKVPGEAKEPSV 349
           + P V+TPV  + P V+TPV  + P+V+TPV  + PVV+TPV  + P +  P   + P V
Sbjct: 370 QPPVVDTPVPEQPPVVDTPVPEQPPMVDTPVPEQPPVVDTPVPEQPPVVDTPVPEQPPVV 429

Query: 350 E 351
           +
Sbjct: 430 D 430

BLAST of CmaCh04G005060 vs. NCBI nr
Match: gi|1000717283|ref|XP_015592943.1| (PREDICTED: titin homolog [Cephus cinctus])

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 144/358 (40.22%), Postives = 176/358 (49.16%), Query Frame = 1

Query: 21   TSAPVLVVEETARKEATSKKEKDV-KVENRQRKFDDDEANEKVEGKATEEAIEDKKEKPK 80
            TS PV   E    ++     E +V   E++ +K  +   NE  EG    +  E+  EKP 
Sbjct: 2623 TSTPVDEEEVPIEQQTQQPVEAEVTSSEDQSKKPVEPTINEPTEGSVPVKPAEEPAEKPN 2682

Query: 81   EDAKVQAASPVATTAAPALLED----KNAAVEVAPVVPKKPTVEAPVADGKPAVEAPVAA 140
            E    +  +  AT      +E+    K A  E  PV  ++ T E P AD KP  E P   
Sbjct: 2683 ESVAEEKPTKEATPGTAGSVEEEKPTKAAIPEEKPVEEEETTKEKP-ADEKPVEEKPAEE 2742

Query: 141  EKPAVEAPVEAKKPAVEAPVEAMKPAVEAP------VEAMKPAVEAPVEAMKPAVEAPVE 200
            EKP  E P E +K A E P E  KPA E P      +E  KP  E P E  K A   PVE
Sbjct: 2743 EKPVEETPTEGQKIAEEKPTEEEKPAEEKPAEEEKPIEQEKPVEETPTEGQKIAEVKPVE 2802

Query: 201  AKKPAVEA-PVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVGAPVEAKKP 260
             +KPA E  PVE +KP  E P E +K A E P E +KPA E P E ++P     VE +KP
Sbjct: 2803 EEKPAEEEQPVEQEKPVEETPTEGQKTAEEKPAEEEKPAEEKPAEEEQP-----VEKEKP 2862

Query: 261  AVGAPVEAKKPAVGAPVEAEKPAVGA-PVEAEKPAVETPVEAEKPAVETPVEAEKPAVET 320
                P E +K A   PV  EKPA    PVE EKP  ETP E +K A E P E EKPA E 
Sbjct: 2863 VEETPTEGQKIAEDKPVIEEKPAEEEQPVEQEKPVEETPAEGQKIAEEKPTEEEKPAEEK 2922

Query: 321  PVEAEKPVVETPVEA-----EKPVV-------ETPVEAEKPTIKVPGEAKEPSVEAAA 354
            P E EKPV ETP E      +KPV+       E PVE EKP  + P E ++ + E  A
Sbjct: 2923 PAEEEKPVEETPTEGQKITEDKPVIEEKPAEEEQPVEQEKPVEETPAEGQKIAEEKPA 2974

BLAST of CmaCh04G005060 vs. NCBI nr
Match: gi|929257448|ref|XP_014005093.1| (PREDICTED: histone H1, orphon-like [Salmo salar])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 130/259 (50.19%), Postives = 169/259 (65.25%), Query Frame = 1

Query: 114 KKPTVEAPVADG-KPAVEAPVAAEKPAVEAPVEAKKPAVEAPVEAMKPAVEAPVEAMKPA 173
           K+P +EA +    K A +AP AA+KPA++AP  AKKPA++AP  A KPA++AP  A KPA
Sbjct: 109 KRPKIEAHLEKNMKTAPKAP-AAKKPALKAPA-AKKPALKAPA-AKKPALKAPA-AKKPA 168

Query: 174 VEAPVEAMKPAVEAPVEAKKPAVEAPVEAKKPAVEAPV----EAKKPAVEAPV----EAK 233
           ++AP  A KPA++AP  AKKPA++A   AKKPA++AP      AKKPA +AP      AK
Sbjct: 169 LKAPA-AKKPALKAPA-AKKPALKAHA-AKKPALKAPAPKAPAAKKPAPKAPAPKAPAAK 228

Query: 234 KPAVEAPV----EAKKPAVGAPVEAKKPAVGAPVEAKKPAVGAPVEAEKPAVGAPVEAEK 293
           KPA +APV     AKKPA  AP  AKKPA  AP  AKKPA  AP  A+KPA+ AP  A+K
Sbjct: 229 KPAPKAPVPKAPAAKKPAPKAPA-AKKPAPKAPA-AKKPAPKAPA-AKKPALKAPA-AKK 288

Query: 294 PAVETPVEAEKPAVETPV----EAEKPAVETPVEAEKPVVETPVEAEKPVVETPVEAEKP 353
           PA++ P  A+KPA++ P       + PA + P  A+KP V+ P  A+KP V+ P  A+KP
Sbjct: 289 PALKAPA-AKKPALKAPAAKKPAPKAPAAKKPAAAKKPKVKKPAAAKKPKVKKPAAAKKP 348

Query: 354 TIKVPGEAKEPSVEAAAAA 356
            +K P  AK+P V+  AAA
Sbjct: 349 KVKKPAAAKKPKVKKPAAA 355

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MAP6_HUMAN1.1e-0630.99Microtubule-associated protein 6 OS=Homo sapiens GN=MAP6 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0D2KA06_9CHLO1.2e-2844.29Component of oligomeric golgi complex 4 OS=Monoraphidium neglectum GN=MNEG_0841 ... [more]
A0A0P6CKR7_9CRUS4.1e-2441.77Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1[more]
E3LUM9_CAERE9.5e-2138.46Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_31104 PE=4 SV=... [more]
L5JW61_PTEAL2.7e-1536.11Fibrous sheath CABYR-binding protein OS=Pteropus alecto GN=PAL_GLEAN10013614 PE=... [more]
M3J1S2_CANMX3.5e-1540.46Uncharacterized protein OS=Candida maltosa (strain Xu316) GN=G210_3979 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|926797099|ref|XP_013906122.1|1.8e-2844.29component of oligomeric golgi complex 4 [Monoraphidium neglectum][more]
gi|1020967067|ref|XP_016159504.1|5.2e-2832.68PREDICTED: microtubule-associated protein 6-like [Ficedula albicollis][more]
gi|917274005|ref|WP_051880717.1|1.1e-2536.93hypothetical protein [Buttiauxella agrestis][more]
gi|1000717283|ref|XP_015592943.1|1.2e-2440.22PREDICTED: titin homolog [Cephus cinctus][more]
gi|929257448|ref|XP_014005093.1|1.2e-2150.19PREDICTED: histone H1, orphon-like [Salmo salar][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000226 microtubule cytoskeleton organization
cellular_component GO:0005575 cellular_component
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008017 microtubule binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G005060.1CmaCh04G005060.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G005060CmoCh04G005440Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G005060Cp4.1LG01g02060Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G005060Carg08175Silver-seed gourdcarcmaB0529
CmaCh04G005060Carg11294Silver-seed gourdcarcmaB0925
The following gene(s) are paralogous to this gene:

None