CmoCh04G005440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G005440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Neurofilament heavy polypeptide
Location	Cmo_Chr04 : 2694574 .. 2695526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCTCTCTCTTTTTAACTCCCTTATAAACATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGAGAAGGAAGCCGTCCTCGCCCCTACCTCTGTTCCCCTTCTTGTTGTTAAGGAGTCCAAGAAGACGAAGGATGATAATGAAGCTAATGAGAAGAAGGTTGAGGTATGCAAGAATTTCAATGTACCCACCATCTTGTTCTAATTTTAATATCAGATTTGAACCGATGACACCCATTTTCAGTCCTCTGCTCTATTTCCTTAACTTCATCTTCATGTCCATGTCTTTTCTTAGGGTGAACCAACCAAAGAAGCAATCCAGGACAAAAAGGAGAAGCCTAAAGAAGAAGACCACAAAGAAGGCGCCAAGGATCAAGCAGCATCGCCTGTCGCCACCACTGCCGCACCTGCGGTGGTCGAAGACAAAAATGCCGCTGTCCAAGTAGCTGCTGTCGTGCCTAAGGAACTCACCGTCCAAGTAGCGGCTATCGAGCATAAGAAACCCGCCGTCGAGGCACCGGTAGCGGACGGTAAACCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCGAAGAAACCCGCCGTCGAGGCACCGGTAGAGGCAAAGAAGCCCGCCTTCGAGGCACCGGTAACGGCCGAGAAACCCTCCGTCGAGGCACCGGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCATCAGCAGCAGTGGCAGCGGAACAAAAACATTAG

mRNA sequence

TTCCTCTCTCTCTTTTTAACTCCCTTATAAACATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGAGAAGGAAGCCGTCCTCGCCCCTACCTCTGTTCCCCTTCTTGTTGTTAAGGAGTCCAAGAAGACGAAGGATGATAATGAAGCTAATGAGAAGAAGGTTGAGGGTGAACCAACCAAAGAAGCAATCCAGGACAAAAAGGAGAAGCCTAAAGAAGAAGACCACAAAGAAGGCGCCAAGGATCAAGCAGCATCGCCTGTCGCCACCACTGCCGCACCTGCGGTGGTCGAAGACAAAAATGCCGCTGTCCAAGTAGCTGCTGTCGTGCCTAAGGAACTCACCGTCCAAGTAGCGGCTATCGAGCATAAGAAACCCGCCGTCGAGGCACCGGTAGCGGACGGTAAACCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCGAAGAAACCCGCCGTCGAGGCACCGGTAGAGGCAAAGAAGCCCGCCTTCGAGGCACCGGTAACGGCCGAGAAACCCTCCGTCGAGGCACCGGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCATCAGCAGCAGTGGCAGCGGAACAAAAACATTAG

Coding sequence (CDS)

ATGGGTGGTTGCACTAGCAAGCCTAAAACCATGGAGAAGGAAGCCGTCCTCGCCCCTACCTCTGTTCCCCTTCTTGTTGTTAAGGAGTCCAAGAAGACGAAGGATGATAATGAAGCTAATGAGAAGAAGGTTGAGGGTGAACCAACCAAAGAAGCAATCCAGGACAAAAAGGAGAAGCCTAAAGAAGAAGACCACAAAGAAGGCGCCAAGGATCAAGCAGCATCGCCTGTCGCCACCACTGCCGCACCTGCGGTGGTCGAAGACAAAAATGCCGCTGTCCAAGTAGCTGCTGTCGTGCCTAAGGAACTCACCGTCCAAGTAGCGGCTATCGAGCATAAGAAACCCGCCGTCGAGGCACCGGTAGCGGACGGTAAACCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCACCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTGGAGGCGAAGAAGCCCGCCGTCGAGGCGCCGGTAGAGGCGAAGAAACCCGCCGTCGAGGCACCGGTAGAGGCAAAGAAGCCCGCCTTCGAGGCACCGGTAACGGCCGAGAAACCCTCCGTCGAGGCACCGGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCGAAGAAGCCCCCCGTCGAGACACCAGTAGAGGCAAAGAAGCCCGCCGTCGAGGCACCAGTAGAGGCGGAGAAACCCACGATTAAGGTACCGGGAGAGGCAAAGGAACCAAGCGTTGAGGCGGCAGCATCAGCAGCAGTGGCAGCGGAACAAAAACATTAG

Homology

[Close]

BLAST of CmoCh04G005440 vs. Swiss-Prot
Match: NO75_LUPLU (Early nodulin-75 (Fragment) OS=Lupinus luteus GN=ENOD2 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06
Identity = 51/138 (36.96%), Postives = 66/138 (47.83%), Query Frame = 1


Query: 112 HKKPAVEAPVADGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPA 171
           H KP ++ P    KP +E P+  +KP V  P   K P V  P   K P   +P   K P 
Sbjct: 68  HVKPPIQYPPPHEKPPIEYPLPHEKPPVYEPPYEKPPPVHPPPHEKPPIEYSPPHEKPPV 127

Query: 172 VEAPVEAKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPV 231
            E P E  KP    P   +KP +E     +KPP+E P   +KPP+E P   +KP +E P 
Sbjct: 128 HEPPYE--KPPLVHPPPHDKPPIEYHPPHEKPPIEYPPPHEKPPIEYPPPHEKPPIEYPP 187

Query: 232 EAEKPTIKVPGEAKEPSV 250
             EKP +  P   K P V
Sbjct: 188 PHEKPPVYEPPYEKPPPV 203

[Close]

BLAST of CmoCh04G005440 vs. TrEMBL
Match: A0A0P6CKR7_9CRUS (Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.3e-21
Identity = 70/152 (46.05%), Postives = 96/152 (63.16%), Query Frame = 1


Query: 110 IEHKKPAVEAPVADGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKK 169
           I+ K PA E P     PA E P++AK PA E P++ K PA E P++AK PA E P++AK 
Sbjct: 412 IQAKTPAKETPTQAKTPAKEPPIQAKPPAKETPIQVKTPAKETPIQAKTPAKENPIQAKN 471

Query: 170 PAVEAPVEAKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEA 229
           PA E P++ K PA E P  A+ P+ E P++AK PP ETP++AK PP ETP++AK PA E 
Sbjct: 472 PAKETPIQPKTPAKETPNQAKTPAKETPIQAKTPPKETPIQAKTPPKETPIQAKTPAKET 531

Query: 230 PVEAEKPTIKVPGEAKEPSVEAAASAAVAAEQ 262
           P++A+ P    P +AK P+      A + A +
Sbjct: 532 PIQAKTPVKGTPSQAKTPAKLTPTQAKIPARE 563

[Close]

BLAST of CmoCh04G005440 vs. TrEMBL
Match: A0A0N8B7M1_9CRUS (Putative Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-11
Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 113 KKPAVEAPVADGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAV 172
           K PA E P     PA E P  AK PA E P++AK PA E P++AK PA E P++AK PA 
Sbjct: 35  KTPAKETPTHAKTPAKETPTHAKTPAKETPIQAKTPAKETPIQAKTPAKETPIQAKTPAK 94

Query: 173 EAPVEAKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVE 232
           E P++AK P    P  A+ P+   P +AK P  ET   AK+ P      AK PA E P+ 
Sbjct: 95  ETPIQAKTPVKGTPSQAKTPAKLTPTQAKIPARETRTPAKETPTAAKTPAKTPAKEKPIP 154

Query: 233 AEKPTIKVPGEAKEPSVEAAASAAVAA 260
           A  P  ++P   K P+ +   + A  +
Sbjct: 155 ATTPAKEMPAPVKTPAKDKTTAKATGS 181

[Close]

BLAST of CmoCh04G005440 vs. TrEMBL
Match: F6H8M6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00570 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.4e-11
Identity = 64/140 (45.71%), Postives = 68/140 (48.57%), Query Frame = 1


Query: 111 EHKKPAVEAPVADGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKP 170
           EHK P VE P  + KP VE P    KP VE P    KP VE P    KP VE P    KP
Sbjct: 102 EHKPP-VEKPPPEHKPPVEKPPPEHKPPVEKPPPEHKPPVEKPPPEHKPPVEKPPPEHKP 161

Query: 171 AVEAPVEAKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAP 230
            VE P    KP  E P    KP VE P    KPPVE P    KPPVE P    KP VE P
Sbjct: 162 PVEKPPPEHKPPVEKPPPLHKPPVEKPPPEHKPPVEKPPPEHKPPVEKPPPEHKPPVEKP 221

Query: 231 VEAEKPTIKVPGEAKEPSVE 251
               KP ++ P    +P VE
Sbjct: 222 PPEHKPPVEKPPPEHKPPVE 240

[Close]

BLAST of CmoCh04G005440 vs. TrEMBL
Match: M3J1S2_CANMX (Uncharacterized protein OS=Candida maltosa (strain Xu316) GN=G210_3979 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10
Identity = 76/192 (39.58%), Postives = 91/192 (47.40%), Query Frame = 1


Query: 71  DQAASPVATTAAPAVVEDKNAAVQVAAVVPKELTVQVAAIEHKKPAVEA-PVADGKPAVE 130
           +++ +PV T A    VE+   AV+          V+  A E   PA E+ P  +  PAVE
Sbjct: 658 EESTTPVETPATEVPVEESTPAVEETTPA-----VETPATEESTPAQESTPAEETTPAVE 717

Query: 131 APVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAFEAPVTA 190
            P E   PAVE PVE        P E   PAVE       PAVE P E   PA E P T 
Sbjct: 718 TPAEETTPAVETPVETPATEETTPAEESTPAVETT-----PAVETPAEETTPAVETPATE 777

Query: 191 EKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVEAEKPTIKVPGEAKEPSV 250
           E P+ E       P VETPVE   P  ETPVE   PAVE PVE   P  +VP +   P+V
Sbjct: 778 ETPATEETT----PAVETPVEETTPAEETPVEETTPAVETPVEESTPATEVPVQETTPAV 835

Query: 251 EAAASAAVAAEQ 262
           E  A+     E+
Sbjct: 838 ETPATEETPVEE 835

[Close]

BLAST of CmoCh04G005440 vs. TrEMBL
Match: B4R7C7_DROSI (GD17435 OS=Drosophila simulans GN=Dsim\GD17435 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10
Identity = 53/120 (44.17%), Postives = 67/120 (55.83%), Query Frame = 1


Query: 135 KKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAFEAPVTAEKPSV 194
           +KPA EAP   +KPA EAP   +KPA EAP   +KP  EAP   +KP  EAP T EKP  
Sbjct: 102 EKPATEAPGTTEKPATEAPGTTEKPATEAPGTTEKPVTEAPGTTEKPVTEAPGTTEKPVT 161

Query: 195 EAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVEAEKPTIKVPGEAKEPSVEAAAS 254
           EAP   +KP  + P   +KP  + P   +KPA +AP    KPT   PG  + P    A++
Sbjct: 162 EAPGTTEKPATDAPGTTEKPATDAPGTTEKPATDAPGTTPKPTTDAPGTTENPETTDAST 221

[Close]

BLAST of CmoCh04G005440 vs. NCBI nr
Match: gi|929257448|ref|XP_014005093.1| (PREDICTED: histone H1, orphon-like [Salmo salar])

HSP 1 Score: 93.6 bits (231), Expect = 5.6e-16
Identity = 104/258 (40.31%), Postives = 134/258 (51.94%), Query Frame = 1


Query: 7   KPKTMEKEAVLAPTSV-PLLVVKESKKTKDDNEANEKKVEGEPTKEAIQDKKEKPKEEDH 66
           K    +K A+ AP +  P L    +KK      A +K     P  +A   KK  PK    
Sbjct: 156 KAPAAKKPALKAPAAKKPALKAPAAKKPALKAHAAKKPALKAPAPKAPAAKKPAPKAPAP 215

Query: 67  KEGAKDQAASPVATTAAPAVVEDKNAAVQVAAVVPKELTVQVAAIEH---KKPAVEAPVA 126
           K  A  + A       APA  +    A       PK    +  A +    KKPA++AP A
Sbjct: 216 KAPAAKKPAPKAPVPKAPAAKKPAPKAPAAKKPAPKAPAAKKPAPKAPAAKKPALKAPAA 275

Query: 127 DGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVE-----AKKPAVEAPVEAKKPAVEAPVE 186
             KPA++AP  AKKPA++AP  AKKPA +AP       AKKP V+ P  AKKP V+ P  
Sbjct: 276 K-KPALKAPA-AKKPALKAPA-AKKPAPKAPAAKKPAAAKKPKVKKPAAAKKPKVKKPAA 335

Query: 187 AKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVEAEKPT 246
           AKKP  + P  A+KP V+ P  AKKP V+ P  AKKP V+ P  AKKP V+ P  A+KP 
Sbjct: 336 AKKPKVKKPAAAKKPKVKKPAAAKKPKVKKPAAAKKPKVKKPAAAKKPKVKKPAAAKKPK 395

Query: 247 IKVPGEAKEPSVEAAASA 256
           +K P  AK+P V+  A+A
Sbjct: 396 VKKPAAAKKPKVKKPAAA 410

[Close]

BLAST of CmoCh04G005440 vs. NCBI nr
Match: gi|1020967067|ref|XP_016159504.1| (PREDICTED: microtubule-associated protein 6-like [Ficedula albicollis])

HSP 1 Score: 86.7 bits (213), Expect = 6.8e-14
Identity = 50/140 (35.71%), Postives = 86/140 (61.43%), Query Frame = 1


Query: 110 IEHKKPAVEAPVADGKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKK 169
           +E KKP +  P+    P +  P+E+K P +  P+E+KKP +  P+E+  P +  P+E+K 
Sbjct: 23  MESKKPKIPDPMESIDPKISVPMESKNPKIPVPMESKKPKIPDPMESIDPKISVPMESKN 82

Query: 170 PAVEAPVEAKKPAFEAPVTAEKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEA 229
           P +  P+E+KKP    P+ +  P +  P+E+K P +  P+E+KKP +  P+E+  P +  
Sbjct: 83  PKIPVPMESKKPKIPDPMESIDPKISVPMESKNPKIPVPMESKKPKIPDPMESIDPKISV 142

Query: 230 PVEAEKPTIKVPGEAKEPSV 250
           P+E++ P I VP E+K+P +
Sbjct: 143 PMESKNPKIPVPMESKKPKI 162

[Close]

BLAST of CmoCh04G005440 vs. NCBI nr
Match: gi|1000717283|ref|XP_015592943.1| (PREDICTED: titin homolog [Cephus cinctus])

HSP 1 Score: 76.3 bits (186), Expect = 9.2e-11
Identity = 99/265 (37.36%), Postives = 130/265 (49.06%), Query Frame = 1


Query: 7    KPKTMEKEAVLAPTSVPLLVVKESKKTKDDNEANEKK-VEGEPTKEAIQDKKEKPKEEDH 66
            +P   EK     PT        E +KT ++  A E+K  E +P +E    +KEKP EE  
Sbjct: 2810 QPVEQEKPVEETPT--------EGQKTAEEKPAEEEKPAEEKPAEEEQPVEKEKPVEETP 2869

Query: 67   KEGAKDQAASPVATTAAPAVVEDKNAAVQVAAVVPKELTVQVAAIEHKKPAVEAPVADGK 126
             EG K     PV        +E+K A  +    V +E  V+    E +K A E P  + K
Sbjct: 2870 TEGQKIAEDKPV--------IEEKPAEEEQP--VEQEKPVEETPAEGQKIAEEKPTEEEK 2929

Query: 127  PAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPA-VEAPVEAKKPAVEAPVEAKKPAFE 186
            PA E P E +KP  E P E +K   + PV  +KPA  E PVE +KP  E P E +K A E
Sbjct: 2930 PAEEKPAEEEKPVEETPTEGQKITEDKPVIEEKPAEEEQPVEQEKPVEETPAEGQKIAEE 2989

Query: 187  APVTAEKPS------VEAPVEAKKPPVETPVEAKKPPVETPVEAKKPA-VEAPVEAEKPT 246
             P   EKP+       E PVE +KP  ETP E +K   + PV  +KPA  E PVE EKP 
Sbjct: 2990 KPAEEEKPAEEKPAEEEQPVEKEKPVEETPTEGQKITEDKPVIEEKPAEEEQPVEQEKPV 3049

Query: 247  IKVPGEAKEPSVEAAASAAVAAEQK 263
             + P E ++ + E  A     AE+K
Sbjct: 3050 EETPAEGQKIAEEKPAEEEKPAEEK 3056

[Close]

BLAST of CmoCh04G005440 vs. NCBI nr
Match: gi|459366471|gb|EMG45813.1| (hypothetical protein G210_3979 [Candida maltosa Xu316])

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10
Identity = 76/192 (39.58%), Postives = 91/192 (47.40%), Query Frame = 1


Query: 71  DQAASPVATTAAPAVVEDKNAAVQVAAVVPKELTVQVAAIEHKKPAVEA-PVADGKPAVE 130
           +++ +PV T A    VE+   AV+          V+  A E   PA E+ P  +  PAVE
Sbjct: 658 EESTTPVETPATEVPVEESTPAVEETTPA-----VETPATEESTPAQESTPAEETTPAVE 717

Query: 131 APVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAFEAPVTA 190
            P E   PAVE PVE        P E   PAVE       PAVE P E   PA E P T 
Sbjct: 718 TPAEETTPAVETPVETPATEETTPAEESTPAVETT-----PAVETPAEETTPAVETPATE 777

Query: 191 EKPSVEAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVEAEKPTIKVPGEAKEPSV 250
           E P+ E       P VETPVE   P  ETPVE   PAVE PVE   P  +VP +   P+V
Sbjct: 778 ETPATEETT----PAVETPVEETTPAEETPVEETTPAVETPVEESTPATEVPVQETTPAV 835

Query: 251 EAAASAAVAAEQ 262
           E  A+     E+
Sbjct: 838 ETPATEETPVEE 835

[Close]

BLAST of CmoCh04G005440 vs. NCBI nr
Match: gi|195567677|ref|XP_002107385.1| (uncharacterized protein Dsimw501_GD17435 [Drosophila simulans])

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10
Identity = 53/120 (44.17%), Postives = 67/120 (55.83%), Query Frame = 1


Query: 135 KKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAVEAPVEAKKPAFEAPVTAEKPSV 194
           +KPA EAP   +KPA EAP   +KPA EAP   +KP  EAP   +KP  EAP T EKP  
Sbjct: 102 EKPATEAPGTTEKPATEAPGTTEKPATEAPGTTEKPVTEAPGTTEKPVTEAPGTTEKPVT 161

Query: 195 EAPVEAKKPPVETPVEAKKPPVETPVEAKKPAVEAPVEAEKPTIKVPGEAKEPSVEAAAS 254
           EAP   +KP  + P   +KP  + P   +KPA +AP    KPT   PG  + P    A++
Sbjct: 162 EAPGTTEKPATDAPGTTEKPATDAPGTTEKPATDAPGTTPKPTTDAPGTTENPETTDAST 221

The following BLAST results are available for this feature:

BLAST of CmoCh04G005440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NO75_LUPLU	1.0e-06	36.96	Early nodulin-75 (Fragment) OS=Lupinus luteus GN=ENOD2 PE=2 SV=1	[more]

BLAST of CmoCh04G005440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0P6CKR7_9CRUS	2.3e-21	46.05	Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1	[more]
A0A0N8B7M1_9CRUS	1.3e-11	40.82	Putative Zinc finger CCHC domain-containing protein OS=Daphnia magna PE=4 SV=1	[more]
F6H8M6_VITVI	8.4e-11	45.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g00570 PE=4 SV=...	[more]
M3J1S2_CANMX	1.1e-10	39.58	Uncharacterized protein OS=Candida maltosa (strain Xu316) GN=G210_3979 PE=4 SV=1	[more]
B4R7C7_DROSI	3.2e-10	44.17	GD17435 OS=Drosophila simulans GN=Dsim\GD17435 PE=4 SV=1	[more]

BLAST of CmoCh04G005440 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh04G005440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|929257448\|ref\|XP_014005093.1\|	5.6e-16	40.31	PREDICTED: histone H1, orphon-like [Salmo salar]	[more]
gi\|1020967067\|ref\|XP_016159504.1\|	6.8e-14	35.71	PREDICTED: microtubule-associated protein 6-like [Ficedula albicollis]	[more]
gi\|1000717283\|ref\|XP_015592943.1\|	9.2e-11	37.36	PREDICTED: titin homolog [Cephus cinctus]	[more]
gi\|459366471\|gb\|EMG45813.1\|	1.6e-10	39.58	hypothetical protein G210_3979 [Candida maltosa Xu316]	[more]
gi\|195567677\|ref\|XP_002107385.1\|	4.6e-10	44.17	uncharacterized protein Dsimw501_GD17435 [Drosophila simulans]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000226	microtubule cytoskeleton organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005874	microtubule
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0008017	microtubule binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005440.1	CmoCh04G005440.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G005440	CmaCh04G005060	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G005440	Cp4.1LG01g02060	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G005440	Carg08175	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G005440	Cucumber (Chinese Long) v3	cmocucB0814
CmoCh04G005440	Watermelon (97103) v2	cmowmbB735
CmoCh04G005440	Wax gourd	cmowgoB0849
CmoCh04G005440	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G005440	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G005440	Wild cucumber (PI 183967)	cmocpiB698
CmoCh04G005440	Cucumber (Chinese Long) v2	cmocuB687
CmoCh04G005440	Melon (DHL92) v3.5.1	cmomeB683
CmoCh04G005440	Melon (DHL92) v3.5.1	cmomeB682
CmoCh04G005440	Watermelon (Charleston Gray)	cmowcgB658
CmoCh04G005440	Watermelon (Charleston Gray)	cmowcgB660
CmoCh04G005440	Watermelon (97103) v1	cmowmB697
CmoCh04G005440	Watermelon (97103) v1	cmowmB699
CmoCh04G005440	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G005440	Bottle gourd (USVL1VR-Ls)	cmolsiB683
CmoCh04G005440	Cucumber (Gy14) v2	cgybcmoB386
CmoCh04G005440	Melon (DHL92) v3.6.1	cmomedB774
CmoCh04G005440	Silver-seed gourd	carcmoB0899