CmaCh03G011270 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G011270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	COPII coat assembly protein SEC16, putative
Location	Cma_Chr03 : 7653707 .. 7654186 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCTGTCAACTCTCCCACCGCCGCGTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCGCTGGCCCCAATCTTTTCCACCGTTTCTGGCTCCGATTCTCTACCGGCAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTTCGGTCCTGCATTTGCATATGA

mRNA sequence

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCTGTCAACTCTCCCACCGCCGCGTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCGCTGGCCCCAATCTTTTCCACCGTTTCTGGCTCCGATTCTCTACCGGCAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTTCGGTCCTGCATTTGCATATGA

Coding sequence (CDS)

ATGGCCAAATCCGCCGCACAGAAAACCTACCCACCGCCGTCGCCGTCGCCATCACCTGCTAATCTCTGCCGCAGAAGCTTGATTCCCTCCTCCGCCATGCCTCCGCAAAACGGCACCCTTTCCCCTGCTCCACCGCCGTCCCCGATTGACTTGAGGCTCCTCTCCAAGTCATCTTCTCAATCCTACACCTCCCTCAAGGACATCCTTCCCTCCTCCGCCGTCGCTGTCAACTCTCCCACCGCCGCGTCCCCCGCTAACTCCGGCTACGAAATCTTGATCCGCAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCGCTGGCCCCAATCTTTTCCACCGTTTCTGGCTCCGATTCTCTACCGGCAATCCGATCTCCAGTTGTCTCGGATTCATCAGAGGCTGTATCATTCCGTCAATAATCCGAGTCTTTCGGTCCTGCATTTGCATATGA

Protein sequence

MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQSYTSLKDILPSSAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICI

Homology

[Close]

BLAST of CmaCh03G011270 vs. TrEMBL
Match: A0A0A0KHJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454420 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 1


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 159
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 157

[Close]

BLAST of CmaCh03G011270 vs. TrEMBL
Match: A0A061EUC6_THECC (COPII coat assembly protein SEC16, putative OS=Theobroma cacao GN=TCM_022851 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.3e-30
Identity = 85/140 (60.71%), Postives = 99/140 (70.71%), Query Frame = 1


Query: 18  SPANLCRR-SLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSSQSYTSLKDILPSSAVA 77
           SP  L RR +L+    +   N   + +   SP+DL L+S K+S  SYTSLKDILPSSAVA
Sbjct: 78  SPVQLPRRLTLLTPKPLQTANSLPNGSASSSPLDLELISLKTSLASYTSLKDILPSSAVA 137

Query: 78  VNSPTAASPA-NSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPI 137
           +NSPTAA  A NSGYEI IRNRLVKQAAWAYLQPMSAS  S+GP+ F R WLRFS+ NPI
Sbjct: 138 INSPTAAGSATNSGYEISIRNRLVKQAAWAYLQPMSASPDSSGPHFFRRIWLRFSSQNPI 197

Query: 138 SSCLGFIRGCIIPSIIRVFR 155
           SSCL F     I S +R F+
Sbjct: 198 SSCLRFSSQNPISSCLRFFQ 217

[Close]

BLAST of CmaCh03G011270 vs. TrEMBL
Match: A0A0D2RBJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G236200 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28
Identity = 84/153 (54.90%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 16  SPSPANLCRRSLIPSSAMPPQNGTLSPAP-------------PPSPIDLRLLS-KSSSQS 75
           SP+     R S+     +P +   L+P P              P P+DL L+S K+S  S
Sbjct: 8   SPTSTIRRRNSITTPVQIPTKLTLLTPKPLQTATSLSSGSATAPLPLDLELISLKASFAS 67

Query: 76  YTSLKDILPSSAVAVNSPTAASPA-NSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 135
           YTSLKDILPS AVAVNSPTAA  A NSGYEI IRNRLVKQAAWAYLQPMSAS  S+G + 
Sbjct: 68  YTSLKDILPSPAVAVNSPTAAGSATNSGYEISIRNRLVKQAAWAYLQPMSASPDSSGTHF 127

Query: 136 FHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVF 154
           F RFWLR S+ NP SSCL FI   ++P + R+F
Sbjct: 128 FRRFWLRLSSQNPFSSCLRFIHLKLLPRLTRLF 160

[Close]

BLAST of CmaCh03G011270 vs. TrEMBL
Match: U5G888_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s22160g PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25
Identity = 76/131 (58.02%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 26  SLIPSSAMPPQ--NGTLSPAPPPSPIDLRLLSKSSSQSYTSLKDILPSSAVAVNSPTAA- 85
           SL PSS +PP   NGT+      SP+D+ LLS  SS SYTSLKD+LPS+ V  NSPT++ 
Sbjct: 28  SLHPSSILPPSLLNGTIL-----SPLDISLLSLKSSSSYTSLKDLLPSATV--NSPTSSN 87

Query: 86  SPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPISSCLGFIR 145
           S   S YEI IRNRLVK AAWAYLQPMS S+ S+G +   R WLRFST NPI++C  F+ 
Sbjct: 88  STTTSSYEISIRNRLVKHAAWAYLQPMSPSADSSG-HFLRRVWLRFSTKNPITACFRFLS 147

Query: 146 GCIIPSIIRVF 154
           G +IPSI   F
Sbjct: 148 GHVIPSITSAF 150

[Close]

BLAST of CmaCh03G011270 vs. TrEMBL
Match: W9RPH0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018844 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 70/127 (55.12%), Postives = 92/127 (72.44%), Query Frame = 1


Query: 30  SSAMPPQNGTLSPAPPPSPIDLRLLS-KSSSQSYTSLKDILPSSAVA----VNSPTAASP 89
           S++ P +NG ++  PPP P++  L++ K++S SYTSLKD+LPSS  A    +NSPT+AS 
Sbjct: 39  SASFPIENGAVA-VPPPPPLNFELIALKTTSSSYTSLKDLLPSSPSAGGGGINSPTSAS- 98

Query: 90  ANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPISSCLGFIRGC 149
           A++  EI IRNRLVKQAAWAYLQPMS+S  S GP    R WLRFS+ N ++SCL FI   
Sbjct: 99  ASAASEISIRNRLVKQAAWAYLQPMSSSPSSTGPRFLRRLWLRFSSQNVVASCLAFINSH 158

Query: 150 IIPSIIR 152
           +IPS+ R
Sbjct: 159 VIPSLSR 163

[Close]

BLAST of CmaCh03G011270 vs. TAIR10
Match: AT5G06280.1 (AT5G06280.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-10
Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 1


Query: 15  PSPSPANLCRRSLIPSSAM---PPQNGTLSPAPPPSPIDLRLLS--KSSSQSYTSLKDIL 74
           PS SPA   RR+   S+     PP+      + PPS  D  L+S   SS  +YTSL+DI+
Sbjct: 5   PSQSPATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDII 64

Query: 75  PS------SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQP--MSASSYSAGPNLF 132
            S      +  ++N   +   + +  +I IRNRLVKQAA +YLQP  +++S  SAG   F
Sbjct: 65  SSPINSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFF 124

[Close]

BLAST of CmaCh03G011270 vs. TAIR10
Match: AT3G52520.1 (AT3G52520.1 unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 1


Query: 26  SLIPSSAMPPQNGTLSPAPPPSPIDLRLLSKSSSQS-----YTSLKDILPSSAVAVNSPT 85
           +L+  S +  +NG +S       +DL L+S + S       YTSLKDILPSS+  V+SP 
Sbjct: 5   NLMNLSLLQRRNGAVSQT-----LDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPA 64

Query: 86  ---AASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPISSC 145
              A + A SG  I IRNRLVKQAA +YLQP S  + S+ P+   R          +SS 
Sbjct: 65  ISFAVASAVSGPTITIRNRLVKQAACSYLQP-STPTPSSNPSFLRR----------VSSS 124

Query: 146 LGFIRGCIIPSIIRVFRS 156
              +      +++R+F S
Sbjct: 125 FIRLVSAFFDALLRIFPS 126

[Close]

BLAST of CmaCh03G011270 vs. NCBI nr
Match: gi|659125286|ref|XP_008462609.1| (PREDICTED: F-box only protein 11 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 126/161 (78.26%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKSAAQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQLTYPPPSPS-----LRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS-SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSAGP 120
           QSYTSLKDILPS SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSAGP
Sbjct: 61  QSYTSLKDILPSASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICI 160
           N FHRF LRFSTGNPI SC GFI   IIP+IIR FR CIC+
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]

BLAST of CmaCh03G011270 vs. NCBI nr
Match: gi|778717611|ref|XP_011657724.1| (PREDICTED: early nodulin-20-like [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 4.8e-55
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 1


Query: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60

Query: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 159
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 157

[Close]

BLAST of CmaCh03G011270 vs. NCBI nr
Match: gi|1009161360|ref|XP_015898854.1| (PREDICTED: uncharacterized protein LOC107432265 [Ziziphus jujuba])

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32
Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 1   MAKSAAQKTYPPPSPSPS-----------PANLCRRSLIP------SSAMPPQNGTLSPA 60
           M  SA  K++P P  +P            PANL   +  P      S++ P QNGT+SP 
Sbjct: 1   MDDSADHKSHPLPLSNPRRRNSISTPLVVPANLTLSTTPPITKPLYSTSFPNQNGTVSPT 60

Query: 61  PPPSPIDLRLLSKSSSQSYTSLKDILPSSAVA-VNSPTAASPANSGYEILIRNRLVKQAA 120
           PPP P+D  L+S  +S +YTSL+D++PSS    ++SPTAAS  NSGYEI IRNRLVKQAA
Sbjct: 61  PPP-PLDFELVSLKTSLAYTSLRDLIPSSPGGLIHSPTAASAVNSGYEISIRNRLVKQAA 120

Query: 121 WAYLQPMSASSYSAGPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVF 154
           WAYLQPMS+S  S G + FHRF LR S  NP+S+CLGFIR  +IP++ R F
Sbjct: 121 WAYLQPMSSSPVSVGTHFFHRFSLRLSAQNPVSACLGFIRSHVIPTLTRAF 170

[Close]

BLAST of CmaCh03G011270 vs. NCBI nr
Match: gi|590632737|ref|XP_007027924.1| (COPII coat assembly protein SEC16, putative [Theobroma cacao])

HSP 1 Score: 138.7 bits (348), Expect = 9.1e-30
Identity = 85/140 (60.71%), Postives = 99/140 (70.71%), Query Frame = 1


Query: 18  SPANLCRR-SLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSSQSYTSLKDILPSSAVA 77
           SP  L RR +L+    +   N   + +   SP+DL L+S K+S  SYTSLKDILPSSAVA
Sbjct: 78  SPVQLPRRLTLLTPKPLQTANSLPNGSASSSPLDLELISLKTSLASYTSLKDILPSSAVA 137

Query: 78  VNSPTAASPA-NSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNLFHRFWLRFSTGNPI 137
           +NSPTAA  A NSGYEI IRNRLVKQAAWAYLQPMSAS  S+GP+ F R WLRFS+ NPI
Sbjct: 138 INSPTAAGSATNSGYEISIRNRLVKQAAWAYLQPMSASPDSSGPHFFRRIWLRFSSQNPI 197

Query: 138 SSCLGFIRGCIIPSIIRVFR 155
           SSCL F     I S +R F+
Sbjct: 198 SSCLRFSSQNPISSCLRFFQ 217

[Close]

BLAST of CmaCh03G011270 vs. NCBI nr
Match: gi|823136734|ref|XP_012468134.1| (PREDICTED: uncharacterized protein LOC105786304 [Gossypium raimondii])

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-28
Identity = 84/153 (54.90%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 16  SPSPANLCRRSLIPSSAMPPQNGTLSPAP-------------PPSPIDLRLLS-KSSSQS 75
           SP+     R S+     +P +   L+P P              P P+DL L+S K+S  S
Sbjct: 8   SPTSTIRRRNSITTPVQIPTKLTLLTPKPLQTATSLSSGSATAPLPLDLELISLKASFAS 67

Query: 76  YTSLKDILPSSAVAVNSPTAASPA-NSGYEILIRNRLVKQAAWAYLQPMSASSYSAGPNL 135
           YTSLKDILPS AVAVNSPTAA  A NSGYEI IRNRLVKQAAWAYLQPMSAS  S+G + 
Sbjct: 68  YTSLKDILPSPAVAVNSPTAAGSATNSGYEISIRNRLVKQAAWAYLQPMSASPDSSGTHF 127

Query: 136 FHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVF 154
           F RFWLR S+ NP SSCL FI   ++P + R+F
Sbjct: 128 FRRFWLRLSSQNPFSSCLRFIHLKLLPRLTRLF 160

The following BLAST results are available for this feature:

BLAST of CmaCh03G011270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh03G011270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHJ9_CUCSA	3.3e-55	77.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454420 PE=4 SV=1	[more]
A0A061EUC6_THECC	6.3e-30	60.71	COPII coat assembly protein SEC16, putative OS=Theobroma cacao GN=TCM_022851 PE=...	[more]
A0A0D2RBJ9_GOSRA	3.5e-28	54.90	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G236200 PE=4 SV=1	[more]
U5G888_POPTR	1.6e-25	58.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s22160g PE=4 SV=1	[more]
W9RPH0_9ROSA	2.1e-25	55.12	Uncharacterized protein OS=Morus notabilis GN=L484_018844 PE=4 SV=1	[more]

BLAST of CmaCh03G011270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06280.1	6.5e-10	39.23	unknown protein	[more]
AT3G52520.1	8.5e-10	37.68	unknown protein	[more]

BLAST of CmaCh03G011270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125286\|ref\|XP_008462609.1\|	2.8e-55	78.26	PREDICTED: F-box only protein 11 [Cucumis melo]	[more]
gi\|778717611\|ref\|XP_011657724.1\|	4.8e-55	77.16	PREDICTED: early nodulin-20-like [Cucumis sativus]	[more]
gi\|1009161360\|ref\|XP_015898854.1\|	2.0e-32	52.05	PREDICTED: uncharacterized protein LOC107432265 [Ziziphus jujuba]	[more]
gi\|590632737\|ref\|XP_007027924.1\|	9.1e-30	60.71	COPII coat assembly protein SEC16, putative [Theobroma cacao]	[more]
gi\|823136734\|ref\|XP_012468134.1\|	5.0e-28	54.90	PREDICTED: uncharacterized protein LOC105786304 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G011270.1	CmaCh03G011270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34569	FAMILY NOT NAMED	coord: 41..154 score: 4.3
None	No IPR available	PANTHER	PTHR34569:SF2	SUBFAMILY NOT NAMED	coord: 41..154 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G011270	Cucsa.083710	Cucumber (Gy14) v1	cgycmaB0153
CmaCh03G011270	Cla017647	Watermelon (97103) v1	cmawmB612
CmaCh03G011270	Csa3G778400	Cucumber (Chinese Long) v2	cmacuB659
CmaCh03G011270	Csa6G454420	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G011270	MELO3C009518	Melon (DHL92) v3.5.1	cmameB600
CmaCh03G011270	MELO3C024577	Melon (DHL92) v3.5.1	cmameB609
CmaCh03G011270	ClCG10G018510	Watermelon (Charleston Gray)	cmawcgB570
CmaCh03G011270	CSPI03G35400	Wild cucumber (PI 183967)	cmacpiB667
CmaCh03G011270	CSPI06G25780	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G011270	CmoCh14G003400	Cucurbita moschata (Rifu)	cmacmoB640
CmaCh03G011270	CmoCh06G005090	Cucurbita moschata (Rifu)	cmacmoB665
CmaCh03G011270	CmoCh07G008590	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G011270	CmoCh03G011180	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G011270	Cp4.1LG10g03670	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G011270	Cp4.1LG19g04720	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G011270	Cp4.1LG03g00460	Cucurbita pepo (Zucchini)	cmacpeB681
CmaCh03G011270	MELO3C024577.2	Melon (DHL92) v3.6.1	cmamedB695
CmaCh03G011270	MELO3C009518.2	Melon (DHL92) v3.6.1	cmamedB684
CmaCh03G011270	CsaV3_3G037750	Cucumber (Chinese Long) v3	cmacucB0788
CmaCh03G011270	CsaV3_6G040990	Cucumber (Chinese Long) v3	cmacucB0810
CmaCh03G011270	Bhi03G001389	Wax gourd	cmawgoB0792
CmaCh03G011270	Carg05340	Silver-seed gourd	carcmaB1125
CmaCh03G011270	Carg25901	Silver-seed gourd	carcmaB0857
CmaCh03G011270	Carg03643	Silver-seed gourd	carcmaB0348
CmaCh03G011270	Carg10507	Silver-seed gourd	carcmaB0333

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G011270	CmaCh14G003450	Cucurbita maxima (Rimu)	cmacmaB270
CmaCh03G011270	CmaCh07G008290	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G011270	Cucurbita maxima (Rimu)	cmacmaB498
CmaCh03G011270	Cucurbita maxima (Rimu)	cmacmaB521
CmaCh03G011270	Cucumber (Gy14) v1	cgycmaB0680
CmaCh03G011270	Cucurbita moschata (Rifu)	cmacmoB651
CmaCh03G011270	Watermelon (Charleston Gray)	cmawcgB582
CmaCh03G011270	Watermelon (Charleston Gray)	cmawcgB590
CmaCh03G011270	Watermelon (97103) v1	cmawmB639
CmaCh03G011270	Watermelon (97103) v1	cmawmB645
CmaCh03G011270	Cucurbita pepo (Zucchini)	cmacpeB689
CmaCh03G011270	Bottle gourd (USVL1VR-Ls)	cmalsiB594
CmaCh03G011270	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G011270	Bottle gourd (USVL1VR-Ls)	cmalsiB609
CmaCh03G011270	Cucumber (Gy14) v2	cgybcmaB406
CmaCh03G011270	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G011270	Silver-seed gourd	carcmaB1269
CmaCh03G011270	Watermelon (97103) v2	cmawmbB671
CmaCh03G011270	Watermelon (97103) v2	cmawmbB680
CmaCh03G011270	Watermelon (97103) v2	cmawmbB689
CmaCh03G011270	Wax gourd	cmawgoB0775