Carg05340 (gene) Silver-seed gourd

Overview
NameCarg05340
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCOPII coat assembly protein SEC16, putative
LocationCucurbita_argyrosperma_scaffold_010 : 1290057 .. 1290542 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATTCCGCCGCACCAAAAACCTATGCAGCGCCGTCGTCACCTGCCTCGATTCTCAGCCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAGTCCTCTTCTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCTCCGCCTCCGCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAAATCCGGCTACGAAATTTCCATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATTTCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCCGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA

mRNA sequence

ATGGCCGATTCCGCCGCACCAAAAACCTATGCAGCGCCGTCGTCACCTGCCTCGATTCTCAGCCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAGTCCTCTTCTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCTCCGCCTCCGCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAAATCCGGCTACGAAATTTCCATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATTTCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCCGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA

Coding sequence (CDS)

ATGGCCGATTCCGCCGCACCAAAAACCTATGCAGCGCCGTCGTCACCTGCCTCGATTCTCAGCCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAGTCCTCTTCTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCTCCGCCTCCGCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAAATCCGGCTACGAAATTTCCATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATTTCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCCGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA

Protein sequence

MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQSYTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL
Homology
[Close]
BLAST of Carg05340 vs. NCBI nr
Match: XP_022963126.1 (uncharacterized protein LOC111463426 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 2.2e-72
Identity = 157/161 (97.52%), Postives = 157/161 (97.52%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60
           MADSAA KTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS
Sbjct: 1   MADSAAQKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60

Query: 61  YTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120
           YTSLKDILP  SASAAAFNSPTAASPA SGYEISIRNRLVKQAAWAYLQPMSASSYSTGS
Sbjct: 61  YTSLKDILP--SASAAAFNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120

Query: 121 NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
           NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL
Sbjct: 121 NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 159

[Close]
BLAST of Carg05340 vs. NCBI nr
Match: XP_022972767.1 (uncharacterized protein LOC111471276 [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 8.8e-69
Identity = 150/161 (93.17%), Postives = 152/161 (94.41%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60
           MADSAA +TYAAPSSPASIL+RRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSS QS
Sbjct: 1   MADSAAQETYAAPSSPASILNRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSFQS 60

Query: 61  YTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120
           YTSLKDILPS     AAFNSPTAASPA SGYEISIRNRLVKQAAWAYLQPMSASSYSTGS
Sbjct: 61  YTSLKDILPS-----AAFNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120

Query: 121 NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
           N FHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL
Sbjct: 121 NIFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 156

[Close]
BLAST of Carg05340 vs. NCBI nr
Match: XP_023518519.1 (uncharacterized protein LOC111781995 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 4.4e-68
Identity = 150/163 (92.02%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60
           MADSAA KTYAAPSSPA ILSRRTSIPSSAIMPPPNVAVSPPLSSPID RILSSKSSSQS
Sbjct: 1   MADSAAQKTYAAPSSPAPILSRRTSIPSSAIMPPPNVAVSPPLSSPIDFRILSSKSSSQS 60

Query: 61  YTSLKDILPSA--SASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYST 120
           YTSLKDILPSA        FNSPTAASPA SGYEISIRNRLVKQAAWAYLQPMS SSYST
Sbjct: 61  YTSLKDILPSAXXXXXXXXFNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSTSSYST 120

Query: 121 GSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
           GSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL
Sbjct: 121 GSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 163

[Close]
BLAST of Carg05340 vs. NCBI nr
Match: XP_022979075.1 (uncharacterized protein LOC111478820 [Cucurbita maxima])

HSP 1 Score: 186.4 bits (472), Expect = 7.5e-44
Identity = 117/164 (71.34%), Postives = 125/164 (76.22%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASI--LSRRTSIPSSAIMPPPNVAVSP-PLSSPIDLRILSSKSS 60
           MA SAA KTY           L RR+ IPSSA MPP N  +SP P  SPIDLR+L SKSS
Sbjct: 1   MAKSAAQKTYPPXXXXXXXXNLCRRSLIPSSA-MPPQNGTLSPAPPPSPIDLRLL-SKSS 60

Query: 61  SQSYTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYS 120
           SQSYTSLKDILPS   SA A NSPTAASPA SGYEI IRNRLVKQAAWAYLQPMSASSYS
Sbjct: 61  SQSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYS 120

Query: 121 TGSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
            G N FHRFWLRFS  NPI++ LGFIRG IIP+I+RV R CIC+
Sbjct: 121 AGPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICI 159

[Close]
BLAST of Carg05340 vs. NCBI nr
Match: XP_022926106.1 (uncharacterized protein LOC111433319 [Cucurbita moschata])

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 116/164 (70.73%), Postives = 123/164 (75.00%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASI--LSRRTSIPSSAIMPPPNVAVSP-PLSSPIDLRILSSKSS 60
           MA SAA KTY           L RR+ IPSSA MPP N  +SP P  SPIDLR+L SKSS
Sbjct: 1   MAKSAAQKTYPPXXXXXXXXNLCRRSLIPSSA-MPPQNGTLSPAPPPSPIDLRLL-SKSS 60

Query: 61  SQSYTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYS 120
           SQSYTSLKDILPS   SA A NSPTAASPA SGYEI IRNRLVKQAAWAYLQPMSASSYS
Sbjct: 61  SQSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYS 120

Query: 121 TGSNFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
            G N FH  WLRFS  NPI++ LGFIRG IIP+I+RV R CICL
Sbjct: 121 AGPNLFHGLWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCICL 159

[Close]
BLAST of Carg05340 vs. TAIR10
Match: AT5G06280.1 (unknown protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10
Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 0 

Query: 15  SPASILSRRTSIPSSAIMPPP----NVAVSPPLSSPIDLRILSSKSSS-QSYTSLKDILP 74
           SPA+ L R  SI +   + PP    ++A +PP  S  D  ++S K SS  +YTSL+DI+ 
Sbjct: 8   SPATQLRRTKSISNMTTLTPPEVPFDIASTPP--SSFDYELISVKPSSFVAYTSLRDIIS 67

Query: 75  S---ASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQP--MSASSYSTGSNFFH 132
           S   +S +  + N   +   + +  +ISIRNRLVKQAA +YLQP  +++S  S GS FF 
Sbjct: 68  SPINSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFFR 127

[Close]
BLAST of Carg05340 vs. TAIR10
Match: AT3G52520.1 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 43  LSSPIDLRILSSKSSSQS----YTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNR 102
           +S  +DL ++S   SS+     YTSLKDILPS+S +  +     A + A SG  I+IRNR
Sbjct: 19  VSQTLDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNR 78

Query: 103 LVKQAAWAYLQPMSASSYSTGSNFFHR 126
           LVKQAA +YLQP S  + S+  +F  R
Sbjct: 79  LVKQAACSYLQP-STPTPSSNPSFLRR 104

[Close]
BLAST of Carg05340 vs. TrEMBL
Match: tr|A0A0A0KHJ9|A0A0A0KHJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.3e-39
Identity = 105/160 (65.62%), Postives = 110/160 (68.75%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60
           MA S+A  TY  PS     L R T +PSS                      LS KSSSQS
Sbjct: 1   MAKSSAQLTYPPPSPS---LRRTTFLPSSXXXXXXXXXXXXXXXXXXXXXXLSFKSSSQS 60

Query: 61  YTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120
           YTSLKDILPSASASAAA NSPTAASPA S YEISIRNRLVKQAAWAYLQPMSASSYS G 
Sbjct: 61  YTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCIC 161
           NFFHRF LRFS  NPI +  GFIR SI+PAI+R  RFCIC
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 157

[Close]
BLAST of Carg05340 vs. TrEMBL
Match: tr|A0A1S3CHC6|A0A1S3CHC6_CUCME (uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.1e-38
Identity = 106/161 (65.84%), Postives = 110/161 (68.32%), Query Frame = 0 

Query: 1   MADSAAPKTYAAPSSPASILSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQS 60
           MA SAA  TY  PS     L R T +PSS                   L +LS KSSSQS
Sbjct: 1   MAKSAAQLTYPPPSPS---LRRTTFLPSSPXXXXXXXXXXXXXXXXXXLALLSFKSSSQS 60

Query: 61  YTSLKDILPSASASAAAFNSPTAASPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGS 120
           YTSLKDILP  SASAAA NSPTAASPA S YEISIRNRLVKQAAWAYLQPMSASSYS G 
Sbjct: 61  YTSLKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGP 120

Query: 121 NFFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL 162
           NFFHRF LRFS  NPI +  GFI  SIIPAI+R  RFCICL
Sbjct: 121 NFFHRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCICL 156

[Close]
BLAST of Carg05340 vs. TrEMBL
Match: tr|A0A1R3HDV1|A0A1R3HDV1_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29613 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.2e-25
Identity = 81/145 (55.86%), Postives = 96/145 (66.21%), Query Frame = 0 

Query: 14  SSPASI---LSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQSYTSLKDILPS 73
           SSP  +   LS  T  P       PN + SPPL    DL ++S K+S  SYTSLKDILPS
Sbjct: 20  SSPVQLPTKLSLLTPDPLQTANSLPNGSASPPL----DLELISLKASFNSYTSLKDILPS 79

Query: 74  ASASAAAFNSPTAA-SPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGSNFFHRFWLR 133
              SA A NSPTAA S + SGYEISIRNRLVKQAAWAYLQPM+AS  S+G +FF R WLR
Sbjct: 80  ---SAVAINSPTAAGSASNSGYEISIRNRLVKQAAWAYLQPMAASPDSSGPHFFRRIWLR 139

Query: 134 FSAANPIANSLGFIRGSIIPAIVRV 155
           FS+ NPI++   F    ++P + RV
Sbjct: 140 FSSQNPISSCFRFFHLKLLPGLTRV 157

[Close]
BLAST of Carg05340 vs. TrEMBL
Match: tr|A0A1R3IIV5|A0A1R3IIV5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11929 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 80/144 (55.56%), Postives = 95/144 (65.97%), Query Frame = 0 

Query: 14  SSPASI---LSRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSSQSYTSLKDILPS 73
           SSP  +   LS  T  P       PN + SPPL    DL ++S K+S  SYTSLKDILPS
Sbjct: 20  SSPVQLPTKLSLLTPNPLETSNSLPNGSASPPL----DLELISLKASFNSYTSLKDILPS 79

Query: 74  ASASAAAFNSPTAA-SPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGSNFFHRFWLR 133
              SA A NSPTAA S + SGYEISIRNRLVKQAAWAYLQPM+AS  S+G +FF R WLR
Sbjct: 80  ---SAVAINSPTAAGSASNSGYEISIRNRLVKQAAWAYLQPMAASPDSSGPHFFRRIWLR 139

Query: 134 FSAANPIANSLGFIRGSIIPAIVR 154
           FS+ NPI++   F    ++P + R
Sbjct: 140 FSSQNPISSCFRFFHLKLLPGLTR 156

[Close]
BLAST of Carg05340 vs. TrEMBL
Match: tr|A0A061EUC6|A0A061EUC6_THECC (COPII coat assembly protein SEC16, putative OS=Theobroma cacao OX=3641 GN=TCM_022851 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.4e-24
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 0 

Query: 16  PASILSRRTSIPSSAIMPPPNVAVSP-PL------------SSPIDLRILSSKSSSQSYT 75
           P S L RR SI S   +P     ++P PL            SSP+DL ++S K+S  SYT
Sbjct: 66  PLSTLGRRNSISSPVQLPRRLTLLTPKPLQTANSLPNGSASSSPLDLELISLKTSLASYT 125

Query: 76  SLKDILPSASASAAAFNSPTAA-SPAKSGYEISIRNRLVKQAAWAYLQPMSASSYSTGSN 135
           SLKDILPS   SA A NSPTAA S   SGYEISIRNRLVKQAAWAYLQPMSAS  S+G +
Sbjct: 126 SLKDILPS---SAVAINSPTAAGSATNSGYEISIRNRLVKQAAWAYLQPMSASPDSSGPH 185

Query: 136 FFHRFWLRFSAANPIAN 139
           FF R WLRFS+ NPI++
Sbjct: 186 FFRRIWLRFSSQNPISS 199

The following BLAST results are available for this feature:
BLAST of Carg05340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963126.12.2e-7297.52uncharacterized protein LOC111463426 [Cucurbita moschata][more]
XP_022972767.18.8e-6993.17uncharacterized protein LOC111471276 [Cucurbita maxima][more]
XP_023518519.14.4e-6892.02uncharacterized protein LOC111781995 [Cucurbita pepo subsp. pepo][more]
XP_022979075.17.5e-4471.34uncharacterized protein LOC111478820 [Cucurbita maxima][more]
XP_022926106.11.4e-4270.73uncharacterized protein LOC111433319 [Cucurbita moschata][more]
BLAST of Carg05340 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06280.13.0e-1041.73unknown protein[more]
AT3G52520.11.8e-0745.98unknown protein[more]
BLAST of Carg05340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg05340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KHJ9|A0A0A0KHJ9_CUCSA6.3e-3965.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1[more]
tr|A0A1S3CHC6|A0A1S3CHC6_CUCME9.1e-3865.84uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=... [more]
tr|A0A1R3HDV1|A0A1R3HDV1_9ROSI5.2e-2555.86Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29613 PE=4 SV=1[more]
tr|A0A1R3IIV5|A0A1R3IIV5_COCAP1.5e-2455.56Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11929 PE=4 ... [more]
tr|A0A061EUC6|A0A061EUC6_THECC7.4e-2458.39COPII coat assembly protein SEC16, putative OS=Theobroma cacao OX=3641 GN=TCM_02... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05340-RACarg05340-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..31
NoneNo IPR availablePANTHERPTHR34569:SF2SUBFAMILY NOT NAMEDcoord: 11..156
NoneNo IPR availablePANTHERPTHR34569FAMILY NOT NAMEDcoord: 11..156

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05340Cla017647Watermelon (97103) v1carwmB0800
Carg05340Csa3G778400Cucumber (Chinese Long) v2carcuB0822
Carg05340Csa6G454420Cucumber (Chinese Long) v2carcuB0826
Carg05340MELO3C024577Melon (DHL92) v3.5.1carmeB0805
Carg05340MELO3C009518Melon (DHL92) v3.5.1carmeB0803
Carg05340ClCG10G018510Watermelon (Charleston Gray)carwcgB0776
Carg05340CSPI06G25780Wild cucumber (PI 183967)carcpiB0847
Carg05340CSPI03G35400Wild cucumber (PI 183967)carcpiB0842
Carg05340Cucsa.083710Cucumber (Gy14) v1carcgyB0916
Carg05340CmaCh14G003450Cucurbita maxima (Rimu)carcmaB1117
Carg05340CmaCh07G008290Cucurbita maxima (Rimu)carcmaB1130
Carg05340CmaCh03G011270Cucurbita maxima (Rimu)carcmaB1125
Carg05340CmoCh03G011180Cucurbita moschata (Rifu)carcmoB1095
Carg05340CmoCh07G008590Cucurbita moschata (Rifu)carcmoB1100
Carg05340CmoCh06G005090Cucurbita moschata (Rifu)carcmoB1099
Carg05340CmoCh14G003400Cucurbita moschata (Rifu)carcmoB1088
Carg05340Lsi03G018470Bottle gourd (USVL1VR-Ls)carlsiB744
Carg05340Cp4.1LG03g00460Cucurbita pepo (Zucchini)carcpeB1138
Carg05340Cp4.1LG08g09700Cucurbita pepo (Zucchini)carcpeB1141
Carg05340Cp4.1LG10g03670Cucurbita pepo (Zucchini)carcpeB1128
Carg05340Cp4.1LG19g04720Cucurbita pepo (Zucchini)carcpeB1135
Carg05340MELO3C009518.2Melon (DHL92) v3.6.1carmedB0815
Carg05340MELO3C024577.2Melon (DHL92) v3.6.1carmedB0816
Carg05340CsaV3_6G040990Cucumber (Chinese Long) v3carcucB0850
Carg05340CsaV3_3G037750Cucumber (Chinese Long) v3carcucB0846
Carg05340Bhi03G001389Wax gourdcarwgoB0945
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05340Carg10507Silver-seed gourdcarcarB280
Carg05340Carg03643Silver-seed gourdcarcarB292
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05340Wax gourdcarwgoB0939
Carg05340Cucumber (Gy14) v2carcgybB0799
Carg05340Cucumber (Gy14) v2carcgybB0796
Carg05340Cucumber (Gy14) v1carcgyB0923
Carg05340Cucurbita maxima (Rimu)carcmaB1129
Carg05340Wild cucumber (PI 183967)carcpiB0846
Carg05340Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05340Watermelon (Charleston Gray)carwcgB0787
Carg05340Watermelon (Charleston Gray)carwcgB0789
Carg05340Watermelon (97103) v1carwmB0807
Carg05340Watermelon (97103) v1carwmB0814
Carg05340Watermelon (97103) v2carwmbB0840
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