Csa6G454420 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF*
BLAST of Csa6G454420 vs. TrEMBL
Match: A0A0A0KHJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454420 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 4.0e-85 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa6G454420 vs. TrEMBL
Match: A0A061EUC6_THECC (COPII coat assembly protein SEC16, putative OS=Theobroma cacao GN=TCM_022851 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.3e-30 Identity = 78/137 (56.93%), Postives = 93/137 (67.88%), Query Frame = 1
BLAST of Csa6G454420 vs. TrEMBL
Match: W9RPH0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018844 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29 Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 1
BLAST of Csa6G454420 vs. TrEMBL
Match: A0A0D2RBJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G236200 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27 Identity = 78/155 (50.32%), Postives = 94/155 (60.65%), Query Frame = 1
BLAST of Csa6G454420 vs. TrEMBL
Match: B9IIN8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s07330g PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 78/152 (51.32%), Postives = 100/152 (65.79%), Query Frame = 1
BLAST of Csa6G454420 vs. TAIR10
Match: AT5G06280.1 (AT5G06280.1 unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 9.7e-14 Identity = 57/149 (38.26%), Postives = 79/149 (53.02%), Query Frame = 1
BLAST of Csa6G454420 vs. TAIR10
Match: AT3G52520.1 (AT3G52520.1 unknown protein) HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 1
BLAST of Csa6G454420 vs. NCBI nr
Match: gi|778717611|ref|XP_011657724.1| (PREDICTED: early nodulin-20-like [Cucumis sativus]) HSP 1 Score: 322.0 bits (824), Expect = 5.8e-85 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa6G454420 vs. NCBI nr
Match: gi|659125286|ref|XP_008462609.1| (PREDICTED: F-box only protein 11 [Cucumis melo]) HSP 1 Score: 302.4 bits (773), Expect = 4.8e-79 Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 1
BLAST of Csa6G454420 vs. NCBI nr
Match: gi|1009161360|ref|XP_015898854.1| (PREDICTED: uncharacterized protein LOC107432265 [Ziziphus jujuba]) HSP 1 Score: 146.0 bits (367), Expect = 5.7e-32 Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = 1
BLAST of Csa6G454420 vs. NCBI nr
Match: gi|590632737|ref|XP_007027924.1| (COPII coat assembly protein SEC16, putative [Theobroma cacao]) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29 Identity = 78/137 (56.93%), Postives = 93/137 (67.88%), Query Frame = 1
BLAST of Csa6G454420 vs. NCBI nr
Match: gi|703131055|ref|XP_010104789.1| (hypothetical protein L484_018844 [Morus notabilis]) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29 Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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