CmaCh01G002810 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G002810
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectinesterase
Location	Cma_Chr01 : 1336866 .. 1343342 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACATTACAATGACAGAATTTTGTTAATAACAACGTTGTTGTTGTTACTTTGTCTCAATGTTTCAAAAGCATTGGATTGTGAATTGAATTTTAAAGATCCGAATAGAGTTGCAAGTACTATTTTTGTTCGTCAATTAGGGTCGGGAAATTTCAAAACAATCCAAAGTGCCATTGATTCGATCCCTACGCAAAATAGTCGATGGATTCGAATTCTAATTTCTCCGGGCGTATATCAGTAAGATATCATTTTATTTATTTACCTTTCTTCGTTTATGTTGCGTGGTTAAAAAGTCTAATTTTTTTTATTTAAACCTGTGAAATCCCACGTCGGTCAGAGAGGGGAATAAAACATTCCTTAGAAGGGTGTGTAAACTTTTCTTGATAGATGCGTTTTAAAACCGTGAAACTAATAATAATACGTAATGGGCTAAAACGGACAATATTTACTCATGGTAACAATATACCGTAAATTACAGGGAAAAGGTGAGAATTCCCCCCGAAAAACCATGCATCTTTCTAGATGGGGTTGATAGAAATCTCACTGAAATTCAATGGAATGACCATGAAACCACAGCTTCAAGTGCCACCTTCACTTCTTCTGCGGTAAATCTCGTGGTACGAGGCATCACGTTTAAGGTATGAGTTCCGACGAGAATTAATTCAAGTATTGAATTTAAATTCTGAACCTTGAACATGGAGCGTAAATGAAATTGACAGAATACTTATAATGCGCCGGGAAGTGTGACGTCACGTAATGATATAAAACCAGCACTTGCAGCTTTTGTAGACGGAGATAAAGCAGTCTTCCATCAGTGTGGCTTTTATGGTCTGCAAGATACTTTGTGGGACGGACCTGGTCGTCATCGATACACCGAATGCTACATCGAAGGTGTAATAGATGTCATATCTGGTACTGGTCAATCTATGTACGAGGTTAGATTTTATATTGTTTTAGCTATATATATATATATGTGTGTGTGTGGGAACTAAACATTCTTTATAAGAGTGAAAATCTCTCCCTAGGCGACGCAATTTAAGATTGTGAGACTAAGGTGATACTTAATGGGTCAAAGCGGATAATATCCGTTAGTGATGGGCTTTGGCTGTTACCAATGGTATTAGACCTAGTCACCGAATGGTGTGCTAGTGAGGATGTTGGCCTCTAAGGGTGGATTGTCAGATCCCACATTAGTTGAAGAGGAGAACGAAACATTCCTTATAAGTGTGGAAACCTCCACTAGCATACATGTTTTAAAATCATGAGGCTAACGACGATACGTAACAGACCAAAGTAGACAATATCTGCTAGCAGTGCGTTTTAACTCTTACAAATGTTATCAAAGTAAGTCATCAGACCATGTGCTAGCGAGAACGCTGGGCCTCTAAGAGGGGTGGATTGTGAGATCTCACATTGGTTGGAGAGGGAAACGAAACATTACAAACACGTTTTAAAACCGTGAGGCTGACGGCTATACGTAATGAGCCAAAACGAACAGTATCTGCTAGCGGTGAGCTTTGGCTGTTACAAATGATGTCATAGTCAATCACCGAACGGTGTGCTAGCGAGGACGCTAGGCTCCCAAGCGAGATGGATAGTGAGATCACACGTTAGTTGGAGAGAGGAACGAAACATTTTTATAAGGGTATGAAAATCTCTCACTAGCAAACGCATTTTAAAACCTTAAGAGAAAGCTCGATAGGTATCTGCTAGCGGCGATACGATATGATTCGAATCGGGTATACCCACGTTTAAAGATTGAATTGGTTCGGAGTTGTGATTTAGTTTTGTTTATGTGTTATTTACTGCAGAAGTGTGTGATAAATATACCAATCAACGTATATGCTCCAATATTAGAACATGGTTACATAACAGCTCAAGGAAAGGAAGCTTCAAGCCATACCAATGGGTTTGTATTCATTGAATGCTCAGTGATTGGAAGTGGAACTGTTTATCTTGGGAGGGCTTATAGACGTTTCTCCACAGTAATTTATCATAAATCATTCCTATCATCTTGTATTAACCCTGTTGGTTGGCATCCTTGGACACAAGTTGGCCATGAGTATGTCTCCGCTTCTCTTTATAAATTTACTCGAACGAGTATCTAATGTTAGATTGATCGACATACTCGAATAAGTACCTAATGCATCAAAATTATTTTGTTATATGATCTTGTAGGATGGATTTTACGTATGTGGAATCAAGTTGCACTGGACCAGGAGCAGACATTTCGAAGCGTGTGCCTTGGATTAAGAATCTTAATAAATATGATCTTAGACGTTTCATCGATATTTCTTTTATTGATCAAGATGGTTGGACTAGAAAGCTTCCTCAGTTTTAGAACTAAATTGACTTGGATCATCCTGTTGTAATAAGTGATGTGTGAAGTGTACTTAACAATTTCTCGGTTAATTGTTAAGTGTTAGGACATTTATGCATCTGTATGATCTGTTTCGTGGTATGAATAAATCAAGTAGCTACATAGTTTTATAATTTGTATGATATTTACTTCGTCTCCTATAACACTTTAGACCACCTCATGACACTATTTCTTTTGCAAACTTGGGGTGTGAGGGGTTGTGTGTGTTAGCTCCAATGACTATCTGCATCCATGCCTCTTCATAGGATGAATCTCGGGTAATTCGACAAAACTATCAGGTCACACAAATCTAACCGCCCTCATCTCTAACTTGACCATACTCATATCGAAATGGACACTCCACAAATACTATATCAACTACTATCGGCTTAAGAAGCTACCTTTGTCTTCCTAAGTTGTCGTGGTGGTCTCCTAGGTCCCTAAGGTGGTTTGTCAGCTCTGACTTGGATTAGCATGATCTCTAGGCTTCTCTGTTCAGACTCCTTGAACCTAGTTAGGTCAAGAGCACCAAGGACCTGGAGGCATTCCATCCTAGATCATAGTCTAGCCAAATTGACTTTAACACTCTAGTCTTGACCCGTTTCTACTATTTGAGTTCTACAGTGAGATCACACGTTCAATCACCTAGAGTTAATGTATCTTAAATCATGCATATAGTTACGCATACTCGACGGGCGATAACATCCATTAAGCACCCAGAGGATAGATCACAAATTTTTCATCATCTTTTCCAGTATAGTTATGTACAAAGTAGTAGTAAACAATCCATACAAAACTTAAGGTACAGTTCTATTATACCTATGTCACGTACGGTAACTAAACAAAGGCTTTACTAGTCATAAAAGCTCTAAACATCTGGAAACTATCCAGTTAAGATTGGTTATACTAGCATGCATGCATTTTCCAGCGATCCCTACCAGTATTACTTATCTAGAATCTTTGTGATTACTTACATGACTATCATGTGCCTTCTCGAGTTCAATTGCTAAGCAGAAAAGTCACCAAAAATTCTAAAAATTCTCTCGAGGAGCCTAATTCAGGTCCGCCCAGGGTCTTCTCGAGTTAGTAAGAGGTGCAAAATCCCCTCGGTTGACTTTGACTGGTATTTTTCAATTTTTTCTCGAGTCCCTAGAGCTATCCCAAACATTGTTTCCTTCTACACTTCCTTGAAATTCAACCTTAAAGGCCCTCGACAAAATCTTTTAAGTTCAAAAATTAAAGAAAAAATTAGAAAAACTAGCATATTTGCTCGACTCGAACATTACAATGCATTTGGTAACAAACCCTAGTTGGTATAAGGTTTTTGAATGTTGGGTCAGAGTCCACCATATAGGTTATATAGATGGGTTACACCGTAAACTTTAACGTGTGTTTACTTGACAAAACAACAAACTCTCGTCACGATCAGATATACTTAAATGGGTTACACCGTAAATATACATTATGTTTATGTAACGAGTAATCTATATTTAAGTGATTTCATTATATATATATATAATATATATATATATAGTATTTAAGGTGTCATTTATATAAGTTACCATATTAGAATTTATGCATTTCAACAATTCAAATGCCAACAAATTTAATTTGATATATAACTTGGATTTCATATCACTTTACGTATATTTCATCATCTCTTAATCATATCTTATTCACCAAAAAAAAATTACACAACTCACATGCTCATAATTAATTTAATTCTCTCATGTTTATAGTGTTTATATATATATGTTATTACAAAAACAATTCATTTTTGTAAAAGGTCTTATGATTTGTTTGTTCCAAGAAATATGGAACAAATTTTGTTAATAACAACGTTGTTGTTGTTACTTTGTCTCAATGTTTCAAAAGCATTAGATTGTGAGTTGAATCCTAATGATCCTAATAGAGTTGCGTATACTATTGTTGTTGACAAATCAGGTTCGGGAAATTTCAAAACAATCCAAAGTGCGATTGATTCGATCCCTTCACAAAATAGCCGATGGATTAGAATTCAAATTTCTAGTGGCATATACTCGTAAGATATCGTTTCATTCCTTTATCATTTTTCGTTCGTGTTGTGTGGCTAATTACGCAATTCATTTTTTATGATATTACCAAATTACTGATACGAGCCATAGATCGAAGTTATAAATAGAACAATTTGAGAAGATCATCGTGATATAATAGGGAAAAGGTGCATATTTCGAAAGAAAAATCGTGCATCTTTCTCGATGGAGCTGGCAGAAGTTCCACGGAAATTCGATGGAATGACCATGCAACCACAGCTACAAGTGCCACCTTCACTTCTATGGCAGAAAATCTCGTAGTAAAAGGCATCACATTCAAGGTAGTATTGCTATTATTTTTTCATGTTAGCAATATTCATTAGCGATGAGCTTGAGTTGTTACAAATAGTATCAAAGTTAGATATCAGACGGTGCGCCAGCGAGGACGATATACCCCAGAGAGGTGAATTGAGAGATCCCACATCGGTTGGAGAGTATATTCCTCCCTAGTGGACACGTCTCTTCTTAGTCCAAATAAGAAAAATAATAATATTTGTTTGCAGTAGACTTAAAAAGTTATAATTTAATAAATTAAAATGACTTTTGCAGAATACGTATAATGCGCCCGGAAGTGTGAAGAGACGAGAAGATATAGCACCAGCAGTTGCAGCTCTCATAGAAGGAGATAGAGGGATTTTCCATAAGTGTGGCTTTGTTGGTCTGCAAGATACCTTGTGGGATGGAAATGGTCGCCATCGCTACACCGAATGCTACATCGAAGGTGTAATCGATGTCATATCTGGTGCTGGTCAATCTATATACGAGGTTAACTTTAAACTATGCTTTGCACATTTTATACTGTTTTTTAGCTATTTTAGCTAGGTTTAAGTCCCACGAGTAAATTCTACAATCAGTAGATATTATCCGTTTTGGTCCGTCATGCATTGTTGTTGACAACCTCACGGTTTTAAAATAAAAACACTTTTATAAGGAATGTTTTGTTCCCCTTATCCAATCGATGTAGGATCTTACAATTCATTTCTCTTGGAGGTCCAGTGTCTTTTTTAGCACACTGCTCGGTGTCTGACTCTGACACTATTTGTAATAGTTTAACCTCACCGCTAGTAAATATTGTACGCTTTGACCCATTACGTATCATCGTCAGCATCACAATTTTAAAATGCGTCTACTATAGAAAGGGTTTATCCCTACTCTAACTAGTGTCTTAGACTATTTGGTAACCTGGCTTTGATACAGTTTGTAATAGTCTAAGTCATCCGCTAGCAAATATTATTCGTTTTGACTCGTTACGTACCATCGTCAATCTCATGGTTTTAAAACACATCCGCTGGAGAATGGTTTCCATACTCTTATAAAGAATATTTTATTCCTCTCTCCAACAGACGTGAGATCTCACAATTATTCAATTGGTTTGAATTTTTTTTTCATTTACGCAAGTGTTCGAGTTAGCTTATATTACATATTTGGATTAATCTCATTACATAACAACTCGAGCCATTCAACAATTCGTGCATTACACCTTAAGTTAGACATTGAATTGGTTTGAAGTTGTGATTACTGTGCTCGTGTTGTTTACTGCAGAACTGTAAGATAAATATACCAATCGACCTATATGCTCCAGTGATAGGACATGGTTACATAACAGCTCAAGGGAAGGAAGATTCAAGCCAAACCAATGGGTTTGTATTCATTGGATGCTCAGTGATTGGAAGTGGGACTGTTTATCTTGGGAGGGCTTACAGACCTTTCTCCACAGTTATTTACTATTCATCTTTCCTGTCAGCTTGTATTAACCCTGCTGGTTGGGATCCTTGGGAACAAGTTGGCCACGAGTAAGCCTTTTCTTTCTTCCTGTTCTTCGCTTCTCGACAGTGAGACGAGACATTAACTCTAAATTGTTATGTGATATGAATCTTGTAGGGCGAGTTTGACATATGCAGAGACACGTTGTATTGGATCAGGAGCAGACACTTCAAAGCGTGTGTCTTGGCTTAAAAAACTTAGTATAGATGAGATTAGACGCTTTACGAGTGTTTCTTTCATCGATCAGGAAGGTTGGACATCGAAGCTTCCTCTATTTTAG

mRNA sequence

ATGGAACATTACAATGACAGAATTTTGTTAATAACAACGTTGTTGTTGTTACTTTGTCTCAATGTTTCAAAAGCATTGGATTGTGAATTGAATTTTAAAGATCCGAATAGAGTTGCAAGTACTATTTTTGTTCGTCAATTAGGGTCGGGAAATTTCAAAACAATCCAAAGTGCCATTGATTCGATCCCTACGCAAAATAGTCGATGGATTCGAATTCTAATTTCTCCGGGCGTATATCAGGAAAAGGTGAGAATTCCCCCCGAAAAACCATGCATCTTTCTAGATGGGGTTGATAGAAATCTCACTGAAATTCAATGGAATGACCATGAAACCACAGCTTCAAGTGCCACCTTCACTTCTTCTGCGGTAAATCTCGTGGTACGAGGCATCACGTTTAAGAATACTTATAATGCGCCGGGAAGTGTGACGTCACGTAATGATATAAAACCAGCACTTGCAGCTTTTGTAGACGGAGATAAAGCAGTCTTCCATCAGTGTGGCTTTTATGGTCTGCAAGATACTTTGTGGGACGGACCTGGTCGTCATCGATACACCGAATGCTACATCGAAGGTGTAATAGATGTCATATCTGGTACTGGTCAATCTATGTACGAGAAGTGTGTGATAAATATACCAATCAACGTATATGCTCCAATATTAGAACATGGTTACATAACAGCTCAAGGAAAGGAAGCTTCAAGCCATACCAATGGGTTTGTATTCATTGAATGCTCAGTGATTGGAAGTGGAACTGTTTATCTTGGGAGGGCTTATAGACGTTTCTCCACAAATACGTATAATGCGCCCGGAAGTGTGAAGAGACGAGAAGATATAGCACCAGCAGTTGCAGCTCTCATAGAAGGAGATAGAGGGATTTTCCATAAGTGTGGCTTTGTTGGTCTGCAAGATACCTTGTGGGATGGAAATGGTCGCCATCGCTACACCGAATGCTACATCGAAGGTGTAATCGATGTCATATCTGGTGCTGGTCAATCTATATACGAGAACTGTAAGATAAATATACCAATCGACCTATATGCTCCAGTGATAGGACATGGTTACATAACAGCTCAAGGGAAGGAAGATTCAAGCCAAACCAATGGGTTTGTATTCATTGGATGCTCAGTGATTGGAAGTGGGACTGTTTATCTTGGGAGGGCTTACAGACCTTTCTCCACAGTTATTTACTATTCATCTTTCCTGTCAGCTTGTATTAACCCTGCTGGTTGGGATCCTTGGGAACAAGTTGGCCACGAGGCGAGTTTGACATATGCAGAGACACGTTGTATTGGATCAGGAGCAGACACTTCAAAGCGTGTGTCTTGGCTTAAAAAACTTAGTATAGATGAGATTAGACGCTTTACGAGTGTTTCTTTCATCGATCAGGAAGGTTGGACATCGAAGCTTCCTCTATTTTAG

Coding sequence (CDS)

ATGGAACATTACAATGACAGAATTTTGTTAATAACAACGTTGTTGTTGTTACTTTGTCTCAATGTTTCAAAAGCATTGGATTGTGAATTGAATTTTAAAGATCCGAATAGAGTTGCAAGTACTATTTTTGTTCGTCAATTAGGGTCGGGAAATTTCAAAACAATCCAAAGTGCCATTGATTCGATCCCTACGCAAAATAGTCGATGGATTCGAATTCTAATTTCTCCGGGCGTATATCAGGAAAAGGTGAGAATTCCCCCCGAAAAACCATGCATCTTTCTAGATGGGGTTGATAGAAATCTCACTGAAATTCAATGGAATGACCATGAAACCACAGCTTCAAGTGCCACCTTCACTTCTTCTGCGGTAAATCTCGTGGTACGAGGCATCACGTTTAAGAATACTTATAATGCGCCGGGAAGTGTGACGTCACGTAATGATATAAAACCAGCACTTGCAGCTTTTGTAGACGGAGATAAAGCAGTCTTCCATCAGTGTGGCTTTTATGGTCTGCAAGATACTTTGTGGGACGGACCTGGTCGTCATCGATACACCGAATGCTACATCGAAGGTGTAATAGATGTCATATCTGGTACTGGTCAATCTATGTACGAGAAGTGTGTGATAAATATACCAATCAACGTATATGCTCCAATATTAGAACATGGTTACATAACAGCTCAAGGAAAGGAAGCTTCAAGCCATACCAATGGGTTTGTATTCATTGAATGCTCAGTGATTGGAAGTGGAACTGTTTATCTTGGGAGGGCTTATAGACGTTTCTCCACAAATACGTATAATGCGCCCGGAAGTGTGAAGAGACGAGAAGATATAGCACCAGCAGTTGCAGCTCTCATAGAAGGAGATAGAGGGATTTTCCATAAGTGTGGCTTTGTTGGTCTGCAAGATACCTTGTGGGATGGAAATGGTCGCCATCGCTACACCGAATGCTACATCGAAGGTGTAATCGATGTCATATCTGGTGCTGGTCAATCTATATACGAGAACTGTAAGATAAATATACCAATCGACCTATATGCTCCAGTGATAGGACATGGTTACATAACAGCTCAAGGGAAGGAAGATTCAAGCCAAACCAATGGGTTTGTATTCATTGGATGCTCAGTGATTGGAAGTGGGACTGTTTATCTTGGGAGGGCTTACAGACCTTTCTCCACAGTTATTTACTATTCATCTTTCCTGTCAGCTTGTATTAACCCTGCTGGTTGGGATCCTTGGGAACAAGTTGGCCACGAGGCGAGTTTGACATATGCAGAGACACGTTGTATTGGATCAGGAGCAGACACTTCAAAGCGTGTGTCTTGGCTTAAAAAACTTAGTATAGATGAGATTAGACGCTTTACGAGTGTTTCTTTCATCGATCAGGAAGGTTGGACATCGAAGCTTCCTCTATTTTAG

Protein sequence

MEHYNDRILLITTLLLLLCLNVSKALDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGSVTSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFSTNTYNAPGSVKRREDIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYIEGVIDVISGAGQSIYENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGSGTVYLGRAYRPFSTVIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKRVSWLKKLSIDEIRRFTSVSFIDQEGWTSKLPLF

Homology

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BLAST of CmaCh01G002810 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.0e-57
Identity = 108/222 (48.65%), Postives = 143/222 (64.41%), Query Frame = 1


Query: 42  IFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNL 101
           +FV Q G GNF TIQ AIDS+P  N  W  I +  G+Y+EK++IP EKP I L G  + L
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 102 TEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPG-SVTSRNDIKPALAAFVDGDK 161
           T ++W+DH + A S TF++ A N VV+ ITF N+YN P     ++N   PA+AA + GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 162 AVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPIL 221
           + F+  GF G+QDTLWD  GRH +  C I+G +D I GTGQS+Y+ CVI +      P L
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGL 213

Query: 222 EHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
             GYITAQG+      NGF+FI C V G+G  +LGR +R +S
Sbjct: 214 A-GYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYS 254

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BLAST of CmaCh01G002810 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.6e-56
Identity = 106/222 (47.75%), Postives = 144/222 (64.86%), Query Frame = 1


Query: 42  IFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNL 101
           + V Q G GNF TIQ AIDS+P  N+ W  I +  G+Y+EK+ IP +KP I + G  +  
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 102 TEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGS-VTSRNDIKPALAAFVDGDK 161
           T ++W+DH + A S TF + A N VV+ ITF N+YN P +   ++N   PA+AAF+ GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 162 AVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPIL 221
           + F+  GF G+QDTLWD  GRH +  C I+G +D I G+GQS+Y+ CVI +      P +
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGV 208

Query: 222 EHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
             GYITAQG+  ++  NGFVFI C V G G  YLGRA+R +S
Sbjct: 209 T-GYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYS 249

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BLAST of CmaCh01G002810 vs. Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 9.9e-56
Identity = 105/214 (49.07%), Postives = 137/214 (64.02%), Query Frame = 1


Query: 264 NTYNAPGSVKRRE----DIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYI 323
           NTYN   S+ +      DI PAVA  + GD+  F+ C F+GLQDT+WD  GRH +  CYI
Sbjct: 80  NTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYI 139

Query: 324 EGVIDVISGAGQSIYENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGS 383
           EG ID I G+GQS+YE+C IN      A  +  GYITAQG+   S  +GFVF+  SV GS
Sbjct: 140 EGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGS 199

Query: 384 GTVYLGRAYRPFSTVIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKR 443
            +VYLGRAY PFS VI+  + LS+ ++P GW  W   G+E S TYAE  C G+G+D S+R
Sbjct: 200 TSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRR 259

Query: 444 VSWLKKL-SIDEIRRFTSVSFIDQEGWTSKLPLF 473
           V W+ KL S    ++F+  +FIDQ+ W S +P F
Sbjct: 260 VPWIDKLHSFYTKQQFSISNFIDQDQWISNIPRF 293

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BLAST of CmaCh01G002810 vs. Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-53
Identity = 112/258 (43.41%), Postives = 146/258 (56.59%), Query Frame = 1


Query: 221 EHGYITAQGK-------EASSHTNGFVFIECSVIGSGTVYLGRAYRRFSTNTYNAPGSVK 280
           E G+I  QGK       E   H    +    +      V  G  ++    NTYN   +  
Sbjct: 81  EKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGITFK----NTYNIVPN-- 140

Query: 281 RREDIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYIEGVIDVISGAGQSI 340
            + +I PAVAA + GDR +     FVGLQDTL+DG GRH Y  C I G ID I G GQS+
Sbjct: 141 NKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSL 200

Query: 341 YENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGSGTVYLGRAYRPFST 400
           ++ C +N+ + +YAP   +G ITA  +   S   GFVF  C+V G G   LGRA+   + 
Sbjct: 201 FKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLGRAWGSNAR 260

Query: 401 VIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKRVSWLKKLSIDEIRR 460
           VI+  S LS  + P GWD W   G+E  LT+ E  C G+GADTS+RV WLKKLS+ E+  
Sbjct: 261 VIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLSLSEVDG 320

Query: 461 FTSVSFIDQEGWTSKLPL 472
           F SVSFIDQ+GW S+ P+
Sbjct: 321 FASVSFIDQDGWISRFPI 332

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BLAST of CmaCh01G002810 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.8e-53
Identity = 107/227 (47.14%), Postives = 143/227 (63.00%), Query Frame = 1


Query: 36  NRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLD 95
           +++A TI V    +  FKT+QSAIDSIP QN  WIRILIS G+Y EKV IP  K  I++ 
Sbjct: 35  SQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQ 94

Query: 96  GVDRNLTEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGSVTSRNDIKPALAAF 155
           G     T I + DH+ T +SATFTS   N+++ GITFKN YN     +S +  KPA+AA 
Sbjct: 95  GGGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNI---ASSSSPTKPAVAAM 154

Query: 156 VDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINV 215
           + GDK       F G QDTL+D  GRH Y  C I G ID I G  QS++E C + + + +
Sbjct: 155 MLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGI 214

Query: 216 YAPILEHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
           Y P   +G ITAQG+++ +   GFVF +C+V+GSG   LGRA++ +S
Sbjct: 215 YPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYS 258

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BLAST of CmaCh01G002810 vs. TrEMBL
Match: A0A0A0LB12_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G536660 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 9.8e-103
Identity = 181/267 (67.79%), Postives = 219/267 (82.02%), Query Frame = 1


Query: 1   MEHYNDR---ILLITTLLLLLCLNVSKALD-CELNFKDPNRVASTIFVRQLGSGNFKTIQ 60
           MEHY  +   + +ITTL++L C+ VSKALD CELN+ DP++VA TI V +LG GNF TIQ
Sbjct: 1   MEHYYSKEISLFIITTLVVLFCVKVSKALDDCELNYNDPHKVAYTIVVDKLGKGNFTTIQ 60

Query: 61  SAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSA 120
           SAI+S+P+Q+++WIRI ISPG+Y EKV IP EK CIFLDG    +TEI WNDHETTA+S 
Sbjct: 61  SAINSVPSQSTKWIRIQISPGIYTEKVTIPSEKSCIFLDGSGLQVTEIHWNDHETTAASP 120

Query: 121 TFTSSAVNLVVRGITFKNTYNAPGSVTSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLW 180
           TFT+SA NLVV+GITF+NTYNA GSV  R DIKPALAA + GDK +FH+CGF GLQDTLW
Sbjct: 121 TFTASAQNLVVQGITFRNTYNARGSVMRREDIKPALAALIQGDKVIFHKCGFIGLQDTLW 180

Query: 181 DGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHT 240
           DGPGRH +T+CYIEGVIDVISG GQS+Y++CVINIP+N YAP+L  G+ITAQGKE  + +
Sbjct: 181 DGPGRHLFTQCYIEGVIDVISGFGQSIYKECVINIPVNAYAPLLNEGFITAQGKENPNES 240

Query: 241 NGFVFIECSVIGSGTVYLGRAYRRFST 264
           +GFVF+ C V GSG V+LGRAYR FST
Sbjct: 241 SGFVFLRCIVQGSGNVFLGRAYRPFST 267

[Close]

BLAST of CmaCh01G002810 vs. TrEMBL
Match: A0A061DSC1_THECC (Pectinesterase OS=Theobroma cacao GN=TCM_004838 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.1e-75
Identity = 138/254 (54.33%), Postives = 176/254 (69.29%), Query Frame = 1


Query: 9   LLITTLLLLLCLNVSKALDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSR 68
           +L    ++LL  ++SKAL+C+LN  +  +VA TI V Q G G+FKTIQ+AIDSIP+ N +
Sbjct: 23  ILALIFIVLLYFSISKALECQLNNANKFKVAHTIRVDQSGKGDFKTIQNAIDSIPSNNDK 82

Query: 69  WIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVR 128
           WIRILISPG ++EKV IP  KPCIFL+G    LT I+W DH  T  SATFTSS  N+V +
Sbjct: 83  WIRILISPGHFREKVTIPANKPCIFLEGAGSKLTSIEWGDHMDTCDSATFTSSPDNIVAK 142

Query: 129 GITFKNTYNAPGSVTSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECY 188
           GI+FKN YN P    ++  ++PALA  + GDK+ F+ C F+GLQDTLWD  GRH +  CY
Sbjct: 143 GISFKNIYNIPSGPDAKKKVEPALAVRIYGDKSAFYNCAFFGLQDTLWDVQGRHYFYNCY 202

Query: 189 IEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSVIG 248
           IEG +D I G+GQS+YEKC IN+    YAP   +GYITAQG+ +S   +GFVF  C   G
Sbjct: 203 IEGAVDFIFGSGQSIYEKCEINLTAGKYAPEYPNGYITAQGRNSSDDPSGFVFKYCVFTG 262

Query: 249 SGTVYLGRAYRRFS 263
            G  YLGRAY  +S
Sbjct: 263 YGKTYLGRAYGAYS 276

[Close]

BLAST of CmaCh01G002810 vs. TrEMBL
Match: A0A067HG98_CITSI (Pectinesterase OS=Citrus sinensis GN=CISIN_1g043974mg PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.5e-74
Identity = 140/256 (54.69%), Postives = 173/256 (67.58%), Query Frame = 1


Query: 10  LITTLLLLLCLNVSKALDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRW 69
           L    LLLL  NVS ALDC+LN  +P +VA TI V + G GNF  IQ AI+ IP  N +W
Sbjct: 8   LFAVTLLLLSSNVSTALDCKLNNANPLKVAYTISVSRSGGGNFTKIQDAINFIPVNNDQW 67

Query: 70  IRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVRG 129
           IRI ISP +YQEKV IP  KPCIFL+G     T+IQW DH+TT SS TFTS + N+V +G
Sbjct: 68  IRIQISPEIYQEKVTIPQNKPCIFLEGASSRTTKIQWGDHDTTISSPTFTSLSENVVAKG 127

Query: 130 ITFKNTYNAPGSV---TSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTE 189
           I F+NTYN P S      R ++K ALAA + GDK+ F+ CGF GLQDTL+D  GRH + +
Sbjct: 128 ILFQNTYNVPPSYRQNQERMEVKQALAARISGDKSAFYNCGFAGLQDTLFDDHGRHYFHQ 187

Query: 190 CYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSV 249
           CYIEG ID I G GQS+Y  C +N+ +  Y P  ++GYITAQG+ ++   +GFVF  C  
Sbjct: 188 CYIEGAIDFIFGNGQSIYHNCAVNVTLKEYLPEKDYGYITAQGRNSTDDPSGFVFTSCQF 247

Query: 250 IGSGTVYLGRAYRRFS 263
           +GSG  YLGRAY  FS
Sbjct: 248 LGSGKAYLGRAYGAFS 263

[Close]

BLAST of CmaCh01G002810 vs. TrEMBL
Match: A0A0D2U2R3_GOSRA (Pectinesterase OS=Gossypium raimondii GN=B456_008G138100 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.1e-73
Identity = 138/258 (53.49%), Postives = 180/258 (69.77%), Query Frame = 1


Query: 8   ILLITTLLLLLCLNVSKALDCELNFKDPN-RVASTIFVRQLGSGNFKTIQSAIDSIPTQN 67
           ++ +  +LLL+C ++ +A +CE + ++   +VA TI V Q G G+FKT+Q AIDSIP+ N
Sbjct: 5   LVFMLIVLLLVCFSICEAFECEFDAENHQFKVADTIRVDQSGKGDFKTVQKAIDSIPSNN 64

Query: 68  SRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLV 127
            +WIRILISPGV++EKV IP +KPCIFL+G  R LT I+WN H  T  SAT TS   ++V
Sbjct: 65  KKWIRILISPGVFREKVTIPYDKPCIFLEGAGRLLTRIEWNSHMRTCDSATLTSFPDSIV 124

Query: 128 VRGITFKNTYNAPGSVTS--RNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRY 187
            +GITFKN YN P +     +N +KPALAA + GDK+ F+ C F+GLQDTLWD  GRH +
Sbjct: 125 AKGITFKNFYNVPLATIPNIKNTVKPALAARIYGDKSAFYNCAFFGLQDTLWDVQGRHYF 184

Query: 188 TECYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIEC 247
             CYIEG ID I G+GQS+YE C IN+ I  YAP   +GYITAQG+ +S   +GFVF  C
Sbjct: 185 KNCYIEGAIDFIFGSGQSIYESCEINLTIGKYAPQYPNGYITAQGRNSSDDPSGFVFKSC 244

Query: 248 SVIGSGTVYLGRAYRRFS 263
              G+G  YLGRAY  +S
Sbjct: 245 VFSGTGKTYLGRAYGAYS 262

[Close]

BLAST of CmaCh01G002810 vs. TrEMBL
Match: V4VWS4_9ROSI (Pectinesterase (Fragment) OS=Citrus clementina GN=CICLE_v10024124mg PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.6e-71
Identity = 131/240 (54.58%), Postives = 164/240 (68.33%), Query Frame = 1


Query: 26  LDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRI 85
           LDC+LN  +P +VA TI V + G GNF  IQ AI+ IP  N +WIRI ISP +YQEKV I
Sbjct: 1   LDCKLNNANPLKVAYTISVSRSGGGNFTKIQDAINFIPVNNDQWIRIQISPEIYQEKVTI 60

Query: 86  PPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGSVTS- 145
           P  KPCIFL+G     T+IQW DH+TT SS TFTS + N+V +GI F+NTYN P S    
Sbjct: 61  PQNKPCIFLEGASSRTTKIQWGDHDTTISSPTFTSLSENVVAKGILFQNTYNVPPSYRQN 120

Query: 146 --RNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQS 205
             R ++K ALAA + GDK+ F+ CGF GLQDTL+D  GRH + +CYIEG ID I G GQS
Sbjct: 121 QERMEVKQALAARISGDKSAFYNCGFAGLQDTLFDDHGRHYFHQCYIEGAIDFIFGNGQS 180

Query: 206 MYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
           +Y  C +N+ +  Y P  ++GYITAQG+ ++   +GFVF  C  +GSG  YLGRAY  FS
Sbjct: 181 IYHNCAVNVTLKEYLPEKDYGYITAQGRNSTDDPSGFVFTSCQFLGSGKAYLGRAYGAFS 240

[Close]

BLAST of CmaCh01G002810 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-58
Identity = 108/222 (48.65%), Postives = 143/222 (64.41%), Query Frame = 1


Query: 42  IFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNL 101
           +FV Q G GNF TIQ AIDS+P  N  W  I +  G+Y+EK++IP EKP I L G  + L
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 102 TEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPG-SVTSRNDIKPALAAFVDGDK 161
           T ++W+DH + A S TF++ A N VV+ ITF N+YN P     ++N   PA+AA + GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 162 AVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPIL 221
           + F+  GF G+QDTLWD  GRH +  C I+G +D I GTGQS+Y+ CVI +      P L
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGL 213

Query: 222 EHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
             GYITAQG+      NGF+FI C V G+G  +LGR +R +S
Sbjct: 214 A-GYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYS 254

[Close]

BLAST of CmaCh01G002810 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-57
Identity = 106/222 (47.75%), Postives = 144/222 (64.86%), Query Frame = 1


Query: 42  IFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNL 101
           + V Q G GNF TIQ AIDS+P  N+ W  I +  G+Y+EK+ IP +KP I + G  +  
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 102 TEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGS-VTSRNDIKPALAAFVDGDK 161
           T ++W+DH + A S TF + A N VV+ ITF N+YN P +   ++N   PA+AAF+ GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 162 AVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPIL 221
           + F+  GF G+QDTLWD  GRH +  C I+G +D I G+GQS+Y+ CVI +      P +
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGV 208

Query: 222 EHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
             GYITAQG+  ++  NGFVFI C V G G  YLGRA+R +S
Sbjct: 209 T-GYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYS 249

[Close]

BLAST of CmaCh01G002810 vs. TAIR10
Match: AT5G26810.1 (AT5G26810.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 5.6e-57
Identity = 105/214 (49.07%), Postives = 137/214 (64.02%), Query Frame = 1


Query: 264 NTYNAPGSVKRRE----DIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYI 323
           NTYN   S+ +      DI PAVA  + GD+  F+ C F+GLQDT+WD  GRH +  CYI
Sbjct: 80  NTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYI 139

Query: 324 EGVIDVISGAGQSIYENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGS 383
           EG ID I G+GQS+YE+C IN      A  +  GYITAQG+   S  +GFVF+  SV GS
Sbjct: 140 EGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGS 199

Query: 384 GTVYLGRAYRPFSTVIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKR 443
            +VYLGRAY PFS VI+  + LS+ ++P GW  W   G+E S TYAE  C G+G+D S+R
Sbjct: 200 TSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRR 259

Query: 444 VSWLKKL-SIDEIRRFTSVSFIDQEGWTSKLPLF 473
           V W+ KL S    ++F+  +FIDQ+ W S +P F
Sbjct: 260 VPWIDKLHSFYTKQQFSISNFIDQDQWISNIPRF 293

[Close]

BLAST of CmaCh01G002810 vs. TAIR10
Match: AT2G47280.1 (AT2G47280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 212.2 bits (539), Expect = 6.8e-55
Identity = 112/258 (43.41%), Postives = 146/258 (56.59%), Query Frame = 1


Query: 221 EHGYITAQGK-------EASSHTNGFVFIECSVIGSGTVYLGRAYRRFSTNTYNAPGSVK 280
           E G+I  QGK       E   H    +    +      V  G  ++    NTYN   +  
Sbjct: 81  EKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGITFK----NTYNIVPN-- 140

Query: 281 RREDIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYIEGVIDVISGAGQSI 340
            + +I PAVAA + GDR +     FVGLQDTL+DG GRH Y  C I G ID I G GQS+
Sbjct: 141 NKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSL 200

Query: 341 YENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGSGTVYLGRAYRPFST 400
           ++ C +N+ + +YAP   +G ITA  +   S   GFVF  C+V G G   LGRA+   + 
Sbjct: 201 FKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLGRAWGSNAR 260

Query: 401 VIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKRVSWLKKLSIDEIRR 460
           VI+  S LS  + P GWD W   G+E  LT+ E  C G+GADTS+RV WLKKLS+ E+  
Sbjct: 261 VIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLSLSEVDG 320

Query: 461 FTSVSFIDQEGWTSKLPL 472
           F SVSFIDQ+GW S+ P+
Sbjct: 321 FASVSFIDQDGWISRFPI 332

[Close]

BLAST of CmaCh01G002810 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 4.4e-54
Identity = 107/227 (47.14%), Postives = 143/227 (63.00%), Query Frame = 1


Query: 36  NRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLD 95
           +++A TI V    +  FKT+QSAIDSIP QN  WIRILIS G+Y EKV IP  K  I++ 
Sbjct: 35  SQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQ 94

Query: 96  GVDRNLTEIQWNDHETTASSATFTSSAVNLVVRGITFKNTYNAPGSVTSRNDIKPALAAF 155
           G     T I + DH+ T +SATFTS   N+++ GITFKN YN     +S +  KPA+AA 
Sbjct: 95  GGGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNI---ASSSSPTKPAVAAM 154

Query: 156 VDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINV 215
           + GDK       F G QDTL+D  GRH Y  C I G ID I G  QS++E C + + + +
Sbjct: 155 MLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGI 214

Query: 216 YAPILEHGYITAQGKEASSHTNGFVFIECSVIGSGTVYLGRAYRRFS 263
           Y P   +G ITAQG+++ +   GFVF +C+V+GSG   LGRA++ +S
Sbjct: 215 YPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYS 258

[Close]

BLAST of CmaCh01G002810 vs. NCBI nr
Match: gi|700203001|gb|KGN58134.1| (hypothetical protein Csa_3G536660 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 181/267 (67.79%), Postives = 219/267 (82.02%), Query Frame = 1


Query: 1   MEHYNDR---ILLITTLLLLLCLNVSKALD-CELNFKDPNRVASTIFVRQLGSGNFKTIQ 60
           MEHY  +   + +ITTL++L C+ VSKALD CELN+ DP++VA TI V +LG GNF TIQ
Sbjct: 1   MEHYYSKEISLFIITTLVVLFCVKVSKALDDCELNYNDPHKVAYTIVVDKLGKGNFTTIQ 60

Query: 61  SAIDSIPTQNSRWIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSA 120
           SAI+S+P+Q+++WIRI ISPG+Y EKV IP EK CIFLDG    +TEI WNDHETTA+S 
Sbjct: 61  SAINSVPSQSTKWIRIQISPGIYTEKVTIPSEKSCIFLDGSGLQVTEIHWNDHETTAASP 120

Query: 121 TFTSSAVNLVVRGITFKNTYNAPGSVTSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLW 180
           TFT+SA NLVV+GITF+NTYNA GSV  R DIKPALAA + GDK +FH+CGF GLQDTLW
Sbjct: 121 TFTASAQNLVVQGITFRNTYNARGSVMRREDIKPALAALIQGDKVIFHKCGFIGLQDTLW 180

Query: 181 DGPGRHRYTECYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHT 240
           DGPGRH +T+CYIEGVIDVISG GQS+Y++CVINIP+N YAP+L  G+ITAQGKE  + +
Sbjct: 181 DGPGRHLFTQCYIEGVIDVISGFGQSIYKECVINIPVNAYAPLLNEGFITAQGKENPNES 240

Query: 241 NGFVFIECSVIGSGTVYLGRAYRRFST 264
           +GFVF+ C V GSG V+LGRAYR FST
Sbjct: 241 SGFVFLRCIVQGSGNVFLGRAYRPFST 267

[Close]

BLAST of CmaCh01G002810 vs. NCBI nr
Match: gi|659093698|ref|XP_008447669.1| (PREDICTED: putative pectinesterase 52 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 147/209 (70.33%), Postives = 180/209 (86.12%), Query Frame = 1


Query: 264 NTYNAPGSVKRREDIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYIEGVI 323
           NTYNA GSV RREDI PA+AALI+GD+ IFHKCGF+GLQDTLWDG GRH +T+CYIEGVI
Sbjct: 51  NTYNALGSVTRREDIKPAIAALIQGDKAIFHKCGFIGLQDTLWDGPGRHLFTQCYIEGVI 110

Query: 324 DVISGAGQSIYENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGSGTVY 383
           DVISG GQSIY+ C INIPI+ YAP++  G+ITAQGKE+ S+++GFVFI C V GSG V+
Sbjct: 111 DVISGFGQSIYKECVINIPINAYAPLLNEGFITAQGKENPSESSGFVFIRCIVKGSGKVF 170

Query: 384 LGRAYRPFSTVIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKRVSWL 443
           LGRAYRPFSTVI++  FL +CI+PAGW+ W+QVGHE++LTY+ETRCIG GADTS RV WL
Sbjct: 171 LGRAYRPFSTVIFHLCFLPSCIDPAGWNSWQQVGHESNLTYSETRCIGPGADTSSRVPWL 230

Query: 444 KKLSIDEIRRFTSVSFIDQEG-WTSKLPL 472
           K+L + +IRRFT +S+ID +G WTS+LP+
Sbjct: 231 KRLDVYQIRRFTDISYIDPQGYWTSRLPV 259

[Close]

BLAST of CmaCh01G002810 vs. NCBI nr
Match: gi|778688667|ref|XP_011652807.1| (PREDICTED: probable pectinesterase 55 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 9.5e-83
Identity = 141/209 (67.46%), Postives = 173/209 (82.78%), Query Frame = 1


Query: 264 NTYNAPGSVKRREDIAPAVAALIEGDRGIFHKCGFVGLQDTLWDGNGRHRYTECYIEGVI 323
           NTYNA GSV RREDI PA+AALI+GD+ IFHKCGF+GLQDTLWDG GRH +T+CYIEGVI
Sbjct: 86  NTYNARGSVMRREDIKPALAALIQGDKVIFHKCGFIGLQDTLWDGPGRHLFTQCYIEGVI 145

Query: 324 DVISGAGQSIYENCKINIPIDLYAPVIGHGYITAQGKEDSSQTNGFVFIGCSVIGSGTVY 383
           DVISG GQSIY+ C INIP++ YAP++  G+ITAQGKE+ ++++GFVF+ C V GSG V+
Sbjct: 146 DVISGFGQSIYKECVINIPVNAYAPLLNEGFITAQGKENPNESSGFVFLRCIVQGSGNVF 205

Query: 384 LGRAYRPFSTVIYYSSFLSACINPAGWDPWEQVGHEASLTYAETRCIGSGADTSKRVSWL 443
           LGRAYRPFSTVI++  FL +CINPAGW+ W Q GHE+ LTY+ETRCIG GADTS RV W+
Sbjct: 206 LGRAYRPFSTVIFHLCFLPSCINPAGWNSWLQAGHESDLTYSETRCIGPGADTSSRVPWV 265

Query: 444 KKLSIDEIRRFTSVSFIDQEG-WTSKLPL 472
            +L    IR FT +S+ID +G WTS++PL
Sbjct: 266 NRLDAFHIRSFTDISYIDPQGYWTSRIPL 294

[Close]

BLAST of CmaCh01G002810 vs. NCBI nr
Match: gi|590719762|ref|XP_007051145.1| (Pectinesterase, putative [Theobroma cacao])

HSP 1 Score: 290.0 bits (741), Expect = 7.3e-75
Identity = 138/254 (54.33%), Postives = 176/254 (69.29%), Query Frame = 1


Query: 9   LLITTLLLLLCLNVSKALDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSR 68
           +L    ++LL  ++SKAL+C+LN  +  +VA TI V Q G G+FKTIQ+AIDSIP+ N +
Sbjct: 23  ILALIFIVLLYFSISKALECQLNNANKFKVAHTIRVDQSGKGDFKTIQNAIDSIPSNNDK 82

Query: 69  WIRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVR 128
           WIRILISPG ++EKV IP  KPCIFL+G    LT I+W DH  T  SATFTSS  N+V +
Sbjct: 83  WIRILISPGHFREKVTIPANKPCIFLEGAGSKLTSIEWGDHMDTCDSATFTSSPDNIVAK 142

Query: 129 GITFKNTYNAPGSVTSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTECY 188
           GI+FKN YN P    ++  ++PALA  + GDK+ F+ C F+GLQDTLWD  GRH +  CY
Sbjct: 143 GISFKNIYNIPSGPDAKKKVEPALAVRIYGDKSAFYNCAFFGLQDTLWDVQGRHYFYNCY 202

Query: 189 IEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSVIG 248
           IEG +D I G+GQS+YEKC IN+    YAP   +GYITAQG+ +S   +GFVF  C   G
Sbjct: 203 IEGAVDFIFGSGQSIYEKCEINLTAGKYAPEYPNGYITAQGRNSSDDPSGFVFKYCVFTG 262

Query: 249 SGTVYLGRAYRRFS 263
            G  YLGRAY  +S
Sbjct: 263 YGKTYLGRAYGAYS 276

[Close]

BLAST of CmaCh01G002810 vs. NCBI nr
Match: gi|985469142|ref|XP_015380662.1| (PREDICTED: probable pectinesterase 55 [Citrus sinensis])

HSP 1 Score: 287.7 bits (735), Expect = 3.6e-74
Identity = 140/256 (54.69%), Postives = 173/256 (67.58%), Query Frame = 1


Query: 10  LITTLLLLLCLNVSKALDCELNFKDPNRVASTIFVRQLGSGNFKTIQSAIDSIPTQNSRW 69
           L    LLLL  NVS ALDC+LN  +P +VA TI V + G GNF  IQ AI+ IP  N +W
Sbjct: 8   LFAVTLLLLSSNVSTALDCKLNNANPLKVAYTISVSRSGGGNFTKIQDAINFIPVNNDQW 67

Query: 70  IRILISPGVYQEKVRIPPEKPCIFLDGVDRNLTEIQWNDHETTASSATFTSSAVNLVVRG 129
           IRI ISP +YQEKV IP  KPCIFL+G     T+IQW DH+TT SS TFTS + N+V +G
Sbjct: 68  IRIQISPEIYQEKVTIPQNKPCIFLEGASSRTTKIQWGDHDTTISSPTFTSLSENVVAKG 127

Query: 130 ITFKNTYNAPGSV---TSRNDIKPALAAFVDGDKAVFHQCGFYGLQDTLWDGPGRHRYTE 189
           I F+NTYN P S      R ++K ALAA + GDK+ F+ CGF GLQDTL+D  GRH + +
Sbjct: 128 ILFQNTYNVPPSYRQNQERMEVKQALAARISGDKSAFYNCGFAGLQDTLFDDHGRHYFHQ 187

Query: 190 CYIEGVIDVISGTGQSMYEKCVINIPINVYAPILEHGYITAQGKEASSHTNGFVFIECSV 249
           CYIEG ID I G GQS+Y  C +N+ +  Y P  ++GYITAQG+ ++   +GFVF  C  
Sbjct: 188 CYIEGAIDFIFGNGQSIYHNCAVNVTLKEYLPEKDYGYITAQGRNSTDDPSGFVFTSCQF 247

Query: 250 IGSGTVYLGRAYRRFS 263
           +GSG  YLGRAY  FS
Sbjct: 248 LGSGKAYLGRAYGAFS 263

The following BLAST results are available for this feature:

BLAST of CmaCh01G002810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME29_ARATH	4.0e-57	48.65	Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1	[more]
PME55_ARATH	2.6e-56	47.75	Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1	[more]
PME52_ARATH	9.9e-56	49.07	Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2	[more]
PME66_ARATH	1.2e-53	43.41	Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2	[more]
PME10_ARATH	7.8e-53	47.14	Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1	[more]

BLAST of CmaCh01G002810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB12_CUCSA	9.8e-103	67.79	Pectinesterase OS=Cucumis sativus GN=Csa_3G536660 PE=4 SV=1	[more]
A0A061DSC1_THECC	5.1e-75	54.33	Pectinesterase OS=Theobroma cacao GN=TCM_004838 PE=4 SV=1	[more]
A0A067HG98_CITSI	2.5e-74	54.69	Pectinesterase OS=Citrus sinensis GN=CISIN_1g043974mg PE=4 SV=1	[more]
A0A0D2U2R3_GOSRA	2.1e-73	53.49	Pectinesterase OS=Gossypium raimondii GN=B456_008G138100 PE=4 SV=1	[more]
V4VWS4_9ROSI	2.6e-71	54.58	Pectinesterase (Fragment) OS=Citrus clementina GN=CICLE_v10024124mg PE=4 SV=1	[more]

BLAST of CmaCh01G002810 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24130.1	2.3e-58	48.65	Pectin lyase-like superfamily protein	[more]
AT5G18990.1	1.5e-57	47.75	Pectin lyase-like superfamily protein	[more]
AT5G26810.1	5.6e-57	49.07	Pectin lyase-like superfamily protein	[more]
AT2G47280.1	6.8e-55	43.41	Pectin lyase-like superfamily protein	[more]
AT2G19150.1	4.4e-54	47.14	Pectin lyase-like superfamily protein	[more]

BLAST of CmaCh01G002810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700203001\|gb\|KGN58134.1\|	1.4e-102	67.79	hypothetical protein Csa_3G536660 [Cucumis sativus]	[more]
gi\|659093698\|ref\|XP_008447669.1\|	1.4e-86	70.33	PREDICTED: putative pectinesterase 52 [Cucumis melo]	[more]
gi\|778688667\|ref\|XP_011652807.1\|	9.5e-83	67.46	PREDICTED: probable pectinesterase 55 [Cucumis sativus]	[more]
gi\|590719762\|ref\|XP_007051145.1\|	7.3e-75	54.33	Pectinesterase, putative [Theobroma cacao]	[more]
gi\|985469142\|ref\|XP_015380662.1\|	3.6e-74	54.69	PREDICTED: probable pectinesterase 55 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G002810.1	CmaCh01G002810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 280..462 score: 9.9E-39coord: 42..264 score: 7.3
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 264..468 score: 2.04E-42coord: 38..266 score: 8.24
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 278..467 score: 7.1E-59coord: 39..261 score: 5.9
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 307..472 score: 4.7E-137coord: 29..177 score: 4.7E
None	No IPR available	PANTHER	PTHR31321:SF32	PECTINESTERASE 52-RELATED	coord: 29..177 score: 4.7E-137coord: 307..472 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G002810	Cucsa.300590	Cucumber (Gy14) v1	cgycmaB0829
CmaCh01G002810	Cla017349	Watermelon (97103) v1	cmawmB416
CmaCh01G002810	Csa3G536660	Cucumber (Chinese Long) v2	cmacuB451
CmaCh01G002810	MELO3C012935	Melon (DHL92) v3.5.1	cmameB419
CmaCh01G002810	ClCG10G011540	Watermelon (Charleston Gray)	cmawcgB387
CmaCh01G002810	CSPI03G25040	Wild cucumber (PI 183967)	cmacpiB454
CmaCh01G002810	CmoCh01G002890	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G002810	Lsi03G011210	Bottle gourd (USVL1VR-Ls)	cmalsiB422
CmaCh01G002810	Cp4.1LG02g16160	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G002810	MELO3C012935.2	Melon (DHL92) v3.6.1	cmamedB482
CmaCh01G002810	CsaV3_3G026620	Cucumber (Chinese Long) v3	cmacucB0543
CmaCh01G002810	Cla97C10G194370	Watermelon (97103) v2	cmawmbB445
CmaCh01G002810	Bhi11G001077	Wax gourd	cmawgoB0553
CmaCh01G002810	CsGy3G023570	Cucumber (Gy14) v2	cgybcmaB365
CmaCh01G002810	Carg07372	Silver-seed gourd	carcmaB1059

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G002810	Cucumber (Gy14) v2	cgybcmaB366
CmaCh01G002810	Cucumber (Gy14) v2	cgybcmaB943
CmaCh01G002810	Melon (DHL92) v3.6.1	cmamedB459
CmaCh01G002810	Silver-seed gourd	carcmaB0143
CmaCh01G002810	Silver-seed gourd	carcmaB0626
CmaCh01G002810	Silver-seed gourd	carcmaB1134
CmaCh01G002810	Cucumber (Chinese Long) v3	cmacucB0545
CmaCh01G002810	Cucumber (Chinese Long) v3	cmacucB0595
CmaCh01G002810	Watermelon (97103) v2	cmawmbB512
CmaCh01G002810	Wax gourd	cmawgoB0552
CmaCh01G002810	Wax gourd	cmawgoB0612
CmaCh01G002810	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G002810	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh01G002810	Cucurbita maxima (Rimu)	cmacmaB440
CmaCh01G002810	Cucumber (Gy14) v1	cgycmaB0559
CmaCh01G002810	Cucumber (Gy14) v1	cgycmaB0607
CmaCh01G002810	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G002810	Cucurbita moschata (Rifu)	cmacmoB466
CmaCh01G002810	Cucurbita moschata (Rifu)	cmacmoB490
CmaCh01G002810	Wild cucumber (PI 183967)	cmacpiB456
CmaCh01G002810	Wild cucumber (PI 183967)	cmacpiB502
CmaCh01G002810	Cucumber (Chinese Long) v2	cmacuB453
CmaCh01G002810	Cucumber (Chinese Long) v2	cmacuB496
CmaCh01G002810	Melon (DHL92) v3.5.1	cmameB398
CmaCh01G002810	Watermelon (Charleston Gray)	cmawcgB377
CmaCh01G002810	Watermelon (97103) v1	cmawmB407
CmaCh01G002810	Cucurbita pepo (Zucchini)	cmacpeB465
CmaCh01G002810	Cucurbita pepo (Zucchini)	cmacpeB472
CmaCh01G002810	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G002810	Bottle gourd (USVL1VR-Ls)	cmalsiB420