Cla97C11G211150 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G211150
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	protein RADIALIS-like 2
Location	Cla97Chr11 : 4539009 .. 4539320 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAGTTCCATCTCCTCATCCTCTCATGACTCTGCCTCTTGGACTCCCAACCAAAACAAAGCCTTTGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCTCAATGTCGCCAACGCCGTCGGCGGTGGCAAGACCCCCGACGAAGTCAAGAGACATTTCGACCTTCTCGTCGAAGATGTCAAACACATTGAATCTGGCCGTGTTCCTTTCCCTAAGTACACCTCCGCTTCTGCCCCCGAAACCTCCAATGGCAACATCAACGACCAAGAACAAAGGTACCTCTCTTTTGTCTAG

mRNA sequence

ATGGCTTCCAGTTCCATCTCCTCATCCTCTCATGACTCTGCCTCTTGGACTCCCAACCAAAACAAAGCCTTTGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCTCAATGTCGCCAACGCCGTCGGCGGTGGCAAGACCCCCGACGAAGTCAAGAGACATTTCGACCTTCTCGTCGAAGATGTCAAACACATTGAATCTGGCCGTGTTCCTTTCCCTAAGTACACCTCCGCTTCTGCCCCCGAAACCTCCAATGGCAACATCAACGACCAAGAACAAAGGTACCTCTCTTTTGTCTAG

Coding sequence (CDS)

ATGGCTTCCAGTTCCATCTCCTCATCCTCTCATGACTCTGCCTCTTGGACTCCCAACCAAAACAAAGCCTTTGAAAGGGCCTTGGCTGTCTTTGACAAGGACACCCCTGATCGCTGGCTCAATGTCGCCAACGCCGTCGGCGGTGGCAAGACCCCCGACGAAGTCAAGAGACATTTCGACCTTCTCGTCGAAGATGTCAAACACATTGAATCTGGCCGTGTTCCTTTCCCTAAGTACACCTCCGCTTCTGCCCCCGAAACCTCCAATGGCAACATCAACGACCAAGAACAAAGGTACCTCTCTTTTGTCTAG

Protein sequence

MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYLSFV

Homology

[Close]

BLAST of Cla97C11G211150 vs. NCBI nr
Match: XP_004148844.1 (PREDICTED: transcription factor RADIALIS-like [Cucumis sativus] >KGN61794.1 MYB transcription factor MYB142 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 4.3e-37
Identity = 80/94 (85.11%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 6  ISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVED 65
          ++S S  S+SWTPNQNKAFERALAVFDKDTPDRWLNVA AVGGGKTPDEVKRHFD LVED
Sbjct: 1  MASISSSSSSWTPNQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKRHFDRLVED 60

Query: 66 VKHIESGRVPFPKYT-SASAPETSNGNINDQEQR 99
          VKHIESGRVPFPKYT S+S+P TSN NI DQEQR
Sbjct: 61 VKHIESGRVPFPKYTSSSSSPTTSNANIKDQEQR 94

[Close]

BLAST of Cla97C11G211150 vs. NCBI nr
Match: XP_023513343.1 (protein RADIALIS-like 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 9.7e-37
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 8  SSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVEDVK 67
          SSSH S+SWTP QNKAFERALAVFDKDTPDRWLNVA AVGGGKTPDEVK HFDLLVEDVK
Sbjct: 5  SSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLVEDVK 64

Query: 68 HIESGRVPFPKYTS-ASAPETSNGNINDQEQR 99
          HIESG VPFP Y+S ASA ETSN N++DQEQR
Sbjct: 65 HIESGHVPFPNYSSTASASETSNANVSDQEQR 96

[Close]

BLAST of Cla97C11G211150 vs. NCBI nr
Match: XP_023515007.1 (transcription factor RADIALIS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35
Identity = 78/91 (85.71%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 8  SSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVEDVK 67
          SSSHDS SW+PNQNKAFERALAVFDKDTPDRWLNVA AV G KT DEVKRHF+LLVEDVK
Sbjct: 5  SSSHDSTSWSPNQNKAFERALAVFDKDTPDRWLNVAKAV-GDKTADEVKRHFELLVEDVK 64

Query: 68 HIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          HIESG VPFP YTS+SAP TS+ NINDQEQR
Sbjct: 65 HIESGLVPFPNYTSSSAPRTSHDNINDQEQR 94

[Close]

BLAST of Cla97C11G211150 vs. NCBI nr
Match: XP_008460938.1 (PREDICTED: protein RADIALIS-like 2 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4  SSISSSSHDSA--SWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDL 63
          +SISSSSHDSA  SWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 
Sbjct: 2  ASISSSSHDSASSSWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDR 61

Query: 64 LVEDVKHIESGRVPFPKYTS 82
          LVEDVKHIESGRVPFPKYTS
Sbjct: 62 LVEDVKHIESGRVPFPKYTS 81

[Close]

BLAST of Cla97C11G211150 vs. NCBI nr
Match: XP_022946976.1 (transcription factor RADIALIS-like [Cucurbita moschata])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 76/93 (81.72%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 8  SSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVEDVK 67
          SSSHDS SW+PNQNKAFE ALAVFDKDTPDRWLNVA AV G KT DEVKRHF+LLVEDVK
Sbjct: 5  SSSHDSTSWSPNQNKAFETALAVFDKDTPDRWLNVAKAV-GDKTVDEVKRHFELLVEDVK 64

Query: 68 HIESGRVPFPKYT--SASAPETSNGNINDQEQR 99
          HIESG VPFP YT  S+SAP TS+ NIN QEQR
Sbjct: 65 HIESGLVPFPNYTSSSSSAPRTSHDNINGQEQR 96

[Close]

BLAST of Cla97C11G211150 vs. TrEMBL
Match: tr|A0A0A0LL58|A0A0A0LL58_CUCSA (MYB transcription factor MYB142 OS=Cucumis sativus OX=3659 GN=Csa_2G247060 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-37
Identity = 80/94 (85.11%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 6  ISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVED 65
          ++S S  S+SWTPNQNKAFERALAVFDKDTPDRWLNVA AVGGGKTPDEVKRHFD LVED
Sbjct: 1  MASISSSSSSWTPNQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKRHFDRLVED 60

Query: 66 VKHIESGRVPFPKYT-SASAPETSNGNINDQEQR 99
          VKHIESGRVPFPKYT S+S+P TSN NI DQEQR
Sbjct: 61 VKHIESGRVPFPKYTSSSSSPTTSNANIKDQEQR 94

[Close]

BLAST of Cla97C11G211150 vs. TrEMBL
Match: tr|A0A1S3CDK8|A0A1S3CDK8_CUCME (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103499673 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 4  SSISSSSHDSA--SWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDL 63
          +SISSSSHDSA  SWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 
Sbjct: 2  ASISSSSHDSASSSWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDR 61

Query: 64 LVEDVKHIESGRVPFPKYTS 82
          LVEDVKHIESGRVPFPKYTS
Sbjct: 62 LVEDVKHIESGRVPFPKYTS 81

[Close]

BLAST of Cla97C11G211150 vs. TrEMBL
Match: tr|A0A2N9HQL9|A0A2N9HQL9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41932 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-28
Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+SS S D  SWT  +NKAFERALAV+DKDTPDRW NVA AV GGKTP+EVKRH++
Sbjct: 1  MASSSLSSQSSD--SWTAKENKAFERALAVYDKDTPDRWHNVAKAV-GGKTPEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          LLVEDVKHIESGRVPFPKY +      ++GN++D+E R
Sbjct: 61 LLVEDVKHIESGRVPFPKYKTTGG--NNHGNMSDEETR 93

[Close]

BLAST of Cla97C11G211150 vs. TrEMBL
Match: tr|A0A2P5EKH9|A0A2P5EKH9_9ROSA (Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_182340 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-27
Identity = 68/98 (69.39%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+SS    SASWT  QNKAFE+ALAV+DKDTPDRW NVA AV GGKTP+EVKRH++
Sbjct: 1  MASSSMSSRG-SSASWTAKQNKAFEKALAVYDKDTPDRWYNVAKAV-GGKTPEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          LLVEDVKHIESG+VPFP Y +     +S GN +D E+R
Sbjct: 61 LLVEDVKHIESGQVPFPNYRTTGG--SSQGNTSDDEKR 94

[Close]

BLAST of Cla97C11G211150 vs. TrEMBL
Match: tr|A0A2P5CA43|A0A2P5CA43_PARAD (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_170770 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-26
Identity = 67/98 (68.37%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+SS     ASWT  QNKAFE+ALAV+DKDTPDRW NVA AV GGKTP+EVKRH++
Sbjct: 1  MASSSMSSRG-SCASWTAKQNKAFEQALAVYDKDTPDRWYNVAKAV-GGKTPEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          LLVEDVKHIESG+VPFP Y +     +S GN +D E+R
Sbjct: 61 LLVEDVKHIESGQVPFPNYRTTGG--SSQGNTSDDEKR 94

[Close]

BLAST of Cla97C11G211150 vs. Swiss-Prot
Match: sp|Q9SIJ5|RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
           MAS S+  SS+ S SWT  QNKAFERALAV+D+DTPDRW NVA AV GGKTP+E KR +D
Sbjct: 1   MASGSM--SSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAV-GGKTPEEAKRQYD 60

Query: 61  LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYLS 102
           LLV D++ IE+G VPFP Y + +   ++ G + D+E+R  S
Sbjct: 61  LLVRDIESIENGHVPFPDYKTTTG-NSNRGRLRDEEKRMRS 97

[Close]

BLAST of Cla97C11G211150 vs. Swiss-Prot
Match: sp|F4JVB8|RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.2e-23
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+SS S  S SWT  QNKAFE+ALA +D+DTP+RW NVA  V GGKT +EVKRH++
Sbjct: 1  MASSSMSSQS--SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GGKTTEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          LLV+D+  IE+G VPFP Y ++     +NG ++ +E+R
Sbjct: 61 LLVQDINSIENGHVPFPNYRTSGG--CTNGRLSQEEKR 93

[Close]

BLAST of Cla97C11G211150 vs. Swiss-Prot
Match: sp|Q58FS3|RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.2e-23
Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 6   ISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFDLLVED 65
           ++S+      W+  +NKAFERALAV+DKDTPDRW NVA AV  G+TP+EVK+H+++LVED
Sbjct: 1   MASTRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAV-EGRTPEEVKKHYEILVED 60

Query: 66  VKHIESGRVPFPKYTSASAPETSNGNINDQEQRY 100
           +K+IESG+VPFP Y       T+ GN+   E+R+
Sbjct: 61  IKYIESGKVPFPNY------RTTGGNMKTDEKRF 87

[Close]

BLAST of Cla97C11G211150 vs. Swiss-Prot
Match: sp|Q8GW75|RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-22
Identity = 59/100 (59.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1   MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
           MASSS+SSSS    SWT  QNK FERALAV+DKDTPDRW NVA AV G K+ +EVKRH+D
Sbjct: 1   MASSSMSSSS----SWTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYD 60

Query: 61  LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYL 101
           +LVED+ +IE   VP PKY +      S G I+D + R +
Sbjct: 61  ILVEDLMNIEQDLVPLPKYKTVDVGSKSRG-IDDFDLRLM 94

[Close]

BLAST of Cla97C11G211150 vs. Swiss-Prot
Match: sp|Q1A173|RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-22
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MAS+S SS S     WT +QNK FERALAV+DKDTPDRW NVA AV GGKT +EVKRH+D
Sbjct: 1  MASNSRSSIS----PWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYD 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          +LVED+ +IE+GRVP P Y +    E+++ +IND + R
Sbjct: 61 ILVEDLINIETGRVPLPNYKTF---ESNSRSINDFDTR 90

[Close]

BLAST of Cla97C11G211150 vs. TAIR10
Match: AT2G21650.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 9.4e-26
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
           MAS S+  SS+ S SWT  QNKAFERALAV+D+DTPDRW NVA AV GGKTP+E KR +D
Sbjct: 1   MASGSM--SSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAV-GGKTPEEAKRQYD 60

Query: 61  LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYLS 102
           LLV D++ IE+G VPFP Y + +   ++ G + D+E+R  S
Sbjct: 61  LLVRDIESIENGHVPFPDYKTTTG-NSNRGRLRDEEKRMRS 97

[Close]

BLAST of Cla97C11G211150 vs. TAIR10
Match: AT4G39250.1 (RAD-like 1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-24
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+SS S  S SWT  QNKAFE+ALA +D+DTP+RW NVA  V GGKT +EVKRH++
Sbjct: 1  MASSSMSSQS--SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GGKTTEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQR 99
          LLV+D+  IE+G VPFP Y ++     +NG ++ +E+R
Sbjct: 61 LLVQDINSIENGHVPFPNYRTSGG--CTNGRLSQEEKR 93

[Close]

BLAST of Cla97C11G211150 vs. TAIR10
Match: AT1G75250.1 (RAD-like 6)

HSP 1 Score: 108.2 bits (269), Expect = 3.0e-24
Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
           MAS+S SS S     WT +QNK FERALAV+DKDTPDRW NVA AV GGKT +EVKRH+D
Sbjct: 1   MASNSRSSIS----PWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYD 60

Query: 61  LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYLS 102
           +LVED+ +IE+GRVP P Y +    E+++ +IND + RY++
Sbjct: 61  ILVEDLINIETGRVPLPNYKTF---ESNSRSINDFDTRYIT 93

[Close]

BLAST of Cla97C11G211150 vs. TAIR10
Match: AT1G19510.1 (RAD-like 5)

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-23
Identity = 59/100 (59.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1   MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
           MASSS+SSSS    SWT  QNK FERALAV+DKDTPDRW NVA AV G K+ +EVKRH+D
Sbjct: 1   MASSSMSSSS----SWTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYD 60

Query: 61  LLVEDVKHIESGRVPFPKYTSASAPETSNGNINDQEQRYL 101
           +LVED+ +IE   VP PKY +      S G I+D + R +
Sbjct: 61  ILVEDLMNIEQDLVPLPKYKTVDVGSKSRG-IDDFDLRLM 94

[Close]

BLAST of Cla97C11G211150 vs. TAIR10
Match: AT2G18328.1 (RAD-like 4)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 1  MASSSISSSSHDSASWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60
          MASSS+S+S     SWT  ++K FE ALA FDKDTPDRW  +A AV GGK+ +EVKRH++
Sbjct: 1  MASSSMSTS-----SWTAREDKQFEMALAKFDKDTPDRWQKIARAV-GGKSTEEVKRHYE 60

Query: 61 LLVEDVKHIESGRVPFPKYTSAS 84
          LL+ DV  IESGR P P+Y + +
Sbjct: 61 LLLRDVNDIESGRYPQPRYRNTN 77

The following BLAST results are available for this feature:

BLAST of Cla97C11G211150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148844.1	4.3e-37	85.11	PREDICTED: transcription factor RADIALIS-like [Cucumis sativus] >KGN61794.1 MYB ...	[more]
XP_023513343.1	9.7e-37	85.87	protein RADIALIS-like 2 [Cucurbita pepo subsp. pepo]	[more]
XP_023515007.1	1.4e-35	85.71	transcription factor RADIALIS-like [Cucurbita pepo subsp. pepo]	[more]
XP_008460938.1	3.4e-34	95.00	PREDICTED: protein RADIALIS-like 2 [Cucumis melo]	[more]
XP_022946976.1	1.9e-32	81.72	transcription factor RADIALIS-like [Cucurbita moschata]	[more]

BLAST of Cla97C11G211150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LL58\|A0A0A0LL58_CUCSA	2.9e-37	85.11	MYB transcription factor MYB142 OS=Cucumis sativus OX=3659 GN=Csa_2G247060 PE=4 ...	[more]
tr\|A0A1S3CDK8\|A0A1S3CDK8_CUCME	2.3e-34	95.00	protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103499673 PE=4 SV=1	[more]
tr\|A0A2N9HQL9\|A0A2N9HQL9_FAGSY	3.2e-28	70.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41932 PE=4 SV=1	[more]
tr\|A0A2P5EKH9\|A0A2P5EKH9_9ROSA	3.5e-27	69.39	Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_...	[more]
tr\|A0A2P5CA43\|A0A2P5CA43_PARAD	1.7e-26	68.37	Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]

BLAST of Cla97C11G211150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SIJ5\|RADL2_ARATH	1.7e-24	58.42	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
sp\|F4JVB8\|RADL1_ARATH	3.2e-23	57.14	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
sp\|Q58FS3\|RAD_ANTMA	4.2e-23	54.26	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
sp\|Q8GW75\|RADL5_ARATH	2.7e-22	59.00	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
sp\|Q1A173\|RADL6_ARATH	7.8e-22	60.20	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]

BLAST of Cla97C11G211150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21650.1	9.4e-26	58.42	Homeodomain-like superfamily protein	[more]
AT4G39250.1	1.8e-24	57.14	RAD-like 1	[more]
AT1G75250.1	3.0e-24	59.41	RAD-like 6	[more]
AT1G19510.1	1.5e-23	59.00	RAD-like 5	[more]
AT2G18328.1	1.3e-19	57.83	RAD-like 4	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G211150.1	Cla97C11G211150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 12..65 e-value: 0.0016 score: 27.7
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 6..76 e-value: 3.8E-20 score: 73.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..103
None	No IPR available	PANTHER	PTHR43952:SF14	PROTEIN RADIALIS-LIKE 1-RELATED	coord: 1..88
None	No IPR available	PANTHER	PTHR43952	FAMILY NOT NAMED	coord: 1..88
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 15..71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G211150	Cla015919	Watermelon (97103) v1	wmwmbB315
Cla97C11G211150	Cla016559	Watermelon (97103) v1	wmwmbB361
Cla97C11G211150	Csa2G247060	Cucumber (Chinese Long) v2	cuwmbB110
Cla97C11G211150	MELO3C023292	Melon (DHL92) v3.5.1	mewmbB089
Cla97C11G211150	MELO3C012507	Melon (DHL92) v3.5.1	mewmbB176
Cla97C11G211150	ClCG11G004400	Watermelon (Charleston Gray)	wcgwmbB065
Cla97C11G211150	ClCG02G004960	Watermelon (Charleston Gray)	wcgwmbB137
Cla97C11G211150	CSPI03G42770	Wild cucumber (PI 183967)	cpiwmbB199
Cla97C11G211150	CSPI02G12200	Wild cucumber (PI 183967)	cpiwmbB112
Cla97C11G211150	Cucsa.109620	Cucumber (Gy14) v1	cgywmbB150
Cla97C11G211150	Cucsa.342440	Cucumber (Gy14) v1	cgywmbB584
Cla97C11G211150	Cucsa.377640	Cucumber (Gy14) v1	cgywmbB646
Cla97C11G211150	CmaCh20G008500	Cucurbita maxima (Rimu)	cmawmbB567
Cla97C11G211150	CmaCh02G003970	Cucurbita maxima (Rimu)	cmawmbB613
Cla97C11G211150	CmaCh19G006700	Cucurbita maxima (Rimu)	cmawmbB527
Cla97C11G211150	CmoCh20G008590	Cucurbita moschata (Rifu)	cmowmbB544
Cla97C11G211150	CmoCh19G006820	Cucurbita moschata (Rifu)	cmowmbB507
Cla97C11G211150	CmoCh02G004030	Cucurbita moschata (Rifu)	cmowmbB587
Cla97C11G211150	Lsi10G003670	Bottle gourd (USVL1VR-Ls)	lsiwmbB043
Cla97C11G211150	CsGy7G010930	Cucumber (Gy14) v2	cgybwmbB494
Cla97C11G211150	CsGy2G012190	Cucumber (Gy14) v2	cgybwmbB105
Cla97C11G211150	CsGy7G000010	Cucumber (Gy14) v2	cgybwmbB492
Cla97C11G211150	MELO3C023292.2	Melon (DHL92) v3.6.1	medwmbB082
Cla97C11G211150	MELO3C012507.2	Melon (DHL92) v3.6.1	medwmbB162
Cla97C11G211150	Carg22945	Silver-seed gourd	carwmbB0929
Cla97C11G211150	Carg19407	Silver-seed gourd	carwmbB0323
Cla97C11G211150	CsaV3_2G014710	Cucumber (Chinese Long) v3	cucwmbB115
Cla97C11G211150	CsaV3_3G045220	Cucumber (Chinese Long) v3	cucwmbB196
Cla97C11G211150	CsaV3_7G000010	Cucumber (Chinese Long) v3	cucwmbB539
Cla97C11G211150	CsaV3_7G023660	Cucumber (Chinese Long) v3	cucwmbB541
Cla97C11G211150	Bhi05G001105	Wax gourd	wgowmbB240
Cla97C11G211150	Bhi10G001619	Wax gourd	wgowmbB352

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C11G211150	Cla97C02G031880	Watermelon (97103) v2	wmbwmbB065

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G211150	Silver-seed gourd	carwmbB0993
Cla97C11G211150	Cucurbita maxima (Rimu)	cmawmbB457
Cla97C11G211150	Cucurbita moschata (Rifu)	cmowmbB438
Cla97C11G211150	Bottle gourd (USVL1VR-Ls)	lsiwmbB080
Cla97C11G211150	Wax gourd	wgowmbB123