Cla97C10G190440 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C10G190440
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cla97Chr10 : 8395573 .. 8397268 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGTCTCACTCACTCTGTTTCTTCTGTCTATATATATGTCTCTGTTTTTGGGGTGTTCTTGAAGATTGATGGTGTTTTTTTTTTCTTTTTCTTTTTCTTTCAAATTTGAATAGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTAGTTCAATTTAGTTAATGTATTCTCAAATTTGGTATTTGGTTAAGTTTGATCTTTGTATGTCGAATTTGGTATTCTATTTTTAAAAAATGATTATGTTGGTTTCTATTTGTAAAATTTTAACATAAAGTTTAGAAAAAAGAGTTACTTTGGATCAAATTGAATCAGAGGAAGATAAAGTAGTATTTAATTTTATTGATGAATCCAAAAGTTTCAACTTTCAGTTAATTATTAATTTAATACAGTTTCGGAGTAATAGGTCATTTGTTCAAATTAATATTATGTTACTTTTTCTCTGATTAATATTGATTTACTTTCTTGCGTATTTTATAAATTTTTAAGTCTACAATTGTTAGGGTAGGTTAAAAGTCTAATTCATATAATTAAATTTAGATTAAATTACTATTTTGGTTTTGAGATTTGTTCAATTTTAGTCATTAAATACATGTATTTTTAGTAAATCTTAAATTTAGTCACTCAATTTTTTTTTAATGAAATTGGCTAAATTTTAATAAGAATTTTTATATAAAAAAAATATAATAGGTGAATATGTTTTCAAAATTTAGTAAAAATATTAATAGATAAAAAAGTTAAAAAAATCAACCATAATTAAGATATAGACTAAATTTAAAATTTATTAAAAATATAAAAATTAAAATTGTCAAAAAAAAAAATTAAAAAAAATGGAAACTCTAAATTTCTCATAGTGAAATCTATCCCTTAAACTTGTAGGTTGATTCAACACCGCCAATTAAATTTTGAAAATTAAATGATGAATTTGCAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

mRNA sequence

ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

Coding sequence (CDS)

ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

Protein sequence

MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Homology

[Close]

BLAST of Cla97C10G190440 vs. NCBI nr
Match: XP_008452292.1 (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 5.8e-150
Identity = 258/262 (98.47%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT
Sbjct: 3   STATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKFAPGS
Sbjct: 243 DHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. NCBI nr
Match: XP_023553506.1 (chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.9 bits (1374), Expect = 3.2e-148
Identity = 257/266 (96.62%), Postives = 258/266 (96.99%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MAATATA S  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MAATATAASTGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLEKW
Sbjct: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           LKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD
Sbjct: 121 LKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 ENLLDHLDNPVANNAWVYATKFAPGS 266

[Close]

BLAST of Cla97C10G190440 vs. NCBI nr
Match: XP_022985252.1 (chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 2.7e-147
Identity = 257/266 (96.62%), Postives = 258/266 (96.99%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MAATATAT   LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MAATATATG--LLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLEKW
Sbjct: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           LKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD
Sbjct: 121 LKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 ENLLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. NCBI nr
Match: XP_004149296.1 (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus] >KGN56207.1 LHCII type III chlorophyll a/b binding protein [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 4.6e-147
Identity = 253/262 (96.56%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA +ATLLRATPFLGQ R S QN LRDVVAMGTGKYTM NDLWYGPDRVKYLGPFSAQT
Sbjct: 3   ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLD+PVANNAWVYATKFAPGS
Sbjct: 243 DHLDDPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. NCBI nr
Match: XP_022929511.1 (chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata])

HSP 1 Score: 530.0 bits (1364), Expect = 4.6e-147
Identity = 254/262 (96.95%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATATS  LLRATPFLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQT
Sbjct: 3   ATATSTGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKFAPGS
Sbjct: 243 DHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. TrEMBL
Match: tr|A0A1S3BUM8|A0A1S3BUM8_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493363 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 3.8e-150
Identity = 258/262 (98.47%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT
Sbjct: 3   STATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKFAPGS
Sbjct: 243 DHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. TrEMBL
Match: tr|A0A0A0L6I8|A0A0A0L6I8_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G099680 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.0e-147
Identity = 253/262 (96.56%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA +ATLLRATPFLGQ R S QN LRDVVAMGTGKYTM NDLWYGPDRVKYLGPFSAQT
Sbjct: 3   ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLD+PVANNAWVYATKFAPGS
Sbjct: 243 DHLDDPVANNAWVYATKFAPGS 264

[Close]

BLAST of Cla97C10G190440 vs. TrEMBL
Match: tr|A0A2P5FFF8|A0A2P5FFF8_9ROSA (Chlorophyll a-b binding protein, chloroplastic OS=Trema orientalis OX=63057 GN=TorRG33x02_078030 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.3e-146
Identity = 251/266 (94.36%), Postives = 257/266 (96.62%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           M   ATA+S+TLLR TPFLGQ+RG S N+LRDVV MGTGKYTMGN+LWYGPDRVKYLGPF
Sbjct: 1   MLMAATASSSTLLRPTPFLGQSRGPSSNALRDVVPMGTGKYTMGNELWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           SAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW
Sbjct: 61  SAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           LKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD
Sbjct: 121 LKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAWVYATKF PGS
Sbjct: 241 ENLLDHLDNPVANNAWVYATKFVPGS 266

[Close]

BLAST of Cla97C10G190440 vs. TrEMBL
Match: tr|A0A2P5B6Y8|A0A2P5B6Y8_PARAD (Chlorophyll a-b binding protein, chloroplastic OS=Parasponia andersonii OX=3476 GN=PanWU01x14_265550 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 2.2e-145
Identity = 248/262 (94.66%), Postives = 255/262 (97.33%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S+TLLR TPFLGQ+RG S N+ RDVV MGTGKYTMGN+LWYGPDRVKYLGPFSAQT
Sbjct: 3   ATASSSTLLRPTPFLGQSRGPSSNAFRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVD
Sbjct: 63  PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PGS
Sbjct: 243 DHLDNPVANNAWVYATKFVPGS 264

[Close]

BLAST of Cla97C10G190440 vs. TrEMBL
Match: tr|W9RGN8|W9RGN8_9ROSA (Chlorophyll a-b binding protein, chloroplastic OS=Morus notabilis OX=981085 GN=L484_018739 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 6.3e-145
Identity = 248/262 (94.66%), Postives = 253/262 (96.56%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S+ LLR TPFLGQ RG S  SLRDVV MGTGKYTMGN+LWYGPDRVKYLGPFSAQT
Sbjct: 3   ATASSSALLRPTPFLGQNRGQSSTSLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVD
Sbjct: 63  PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PGS
Sbjct: 243 DHLDNPVANNAWVYATKFVPGS 264

[Close]

BLAST of Cla97C10G190440 vs. Swiss-Prot
Match: sp|P27489|CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB13 PE=1 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.4e-141
Identity = 237/262 (90.46%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S T+++ATPFLGQT+ +  N LRDVVAMG+ ++TM NDLWYGPDRVKYLGPFSAQT
Sbjct: 6   ATASSTTVVKATPFLGQTKNA--NPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQT 65

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI PEVLEKW+KVD
Sbjct: 66  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVD 125

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIF++GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGE
Sbjct: 126 FKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGE 185

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 186 GNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 245

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PG+
Sbjct: 246 DHLDNPVANNAWVYATKFVPGA 265

[Close]

BLAST of Cla97C10G190440 vs. Swiss-Prot
Match: sp|Q9S7M0|CB3_ARATH (Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB3 PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 3.7e-140
Identity = 236/266 (88.72%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MA+T T +S+++L  T FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MASTFT-SSSSVLTPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           S QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+KW
Sbjct: 61  SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           ++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLD
Sbjct: 121 VRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAW +ATKFAPG+
Sbjct: 241 ENLLDHLDNPVANNAWAFATKFAPGA 265

[Close]

BLAST of Cla97C10G190440 vs. Swiss-Prot
Match: sp|P27523|CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHBC PE=2 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.4e-134
Identity = 230/268 (85.82%), Postives = 247/268 (92.16%), Query Frame = 0


Query: 1   MAAT-ATATSATLLRATPFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLG 60
           MA+T   A S  ++  TPFL GQ R +S + LRD+ A   G+ TMGNDLWYGPDRVKYLG
Sbjct: 1   MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 60

Query: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 120
           PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGC+ PEVL+
Sbjct: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 120

Query: 121 KWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
           KW+ V+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRING
Sbjct: 121 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 180

Query: 181 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
           LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLLDHLDNPVANNAWVYATKFAPGS 267
           PLENL DHLD+PVANNAWV+ATKFAPGS
Sbjct: 241 PLENLFDHLDDPVANNAWVFATKFAPGS 268

[Close]

BLAST of Cla97C10G190440 vs. Swiss-Prot
Match: sp|P14278|CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB4 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.8e-101
Identity = 185/262 (70.61%), Postives = 206/262 (78.63%), Query Frame = 0


Query: 13  LRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQT 72
           ++ + F+GQ  G SQN  +R V   G G+ TM          +WYG DR KYLGPFS QT
Sbjct: 6   IQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQT 65

Query: 73  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 132
           PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L K   V 
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVK 125

Query: 133 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 192
           F E VWFKAG+QIF+EGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GE
Sbjct: 126 FGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG-GPLGE 185

Query: 193 GND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 252
           G D +YPGG  FDPLGLADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 186 GLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 245

Query: 253 LDHLDNPVANNAWVYATKFAPG 266
            DH+++PVANNAW YAT F PG
Sbjct: 246 SDHINDPVANNAWAYATNFVPG 264

[Close]

BLAST of Cla97C10G190440 vs. Swiss-Prot
Match: sp|P12328|CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba OX=4470 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.7e-100
Identity = 183/265 (69.06%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 9   SATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFS 68
           +A+ ++++ F GQT    ++ L   V +  G+++M          +WYG DR K+LGPFS
Sbjct: 2   AASAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61

Query: 69  AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWL 128
            QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGCI PE+L K  
Sbjct: 62  EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK-N 121

Query: 129 KVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDG 188
            V F E VWFKAGAQIF+EGGLDYLGNPNLVHAQSILA+   QVVLMGL+EG+R+ G   
Sbjct: 122 GVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GP 181

Query: 189 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 248
           +GEG D LYPGG  FDPLGLADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 182 LGEGLDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 241

Query: 249 ENLLDHLDNPVANNAWVYATKFAPG 266
           ENL DH+ +PVANNAW +AT F PG
Sbjct: 242 ENLADHIADPVANNAWAFATNFVPG 263

[Close]

BLAST of Cla97C10G190440 vs. TAIR10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3)

HSP 1 Score: 498.8 bits (1283), Expect = 2.0e-141
Identity = 236/266 (88.72%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MA+T T +S+++L  T FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MASTFT-SSSSVLTPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           S QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+KW
Sbjct: 61  SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           ++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLD
Sbjct: 121 VRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAW +ATKFAPG+
Sbjct: 241 ENLLDHLDNPVANNAWAFATKFAPGA 265

[Close]

BLAST of Cla97C10G190440 vs. TAIR10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1)

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-99
Identity = 185/269 (68.77%), Postives = 205/269 (76.21%), Query Frame = 0


Query: 7   ATSATLLRATPFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLG 66
           ATSA  ++ + F GQT     N  LR V   G G+ TM          +WYGPDR KYLG
Sbjct: 2   ATSA--IQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLG 61

Query: 67  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 126
           PFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L 
Sbjct: 62  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 121

Query: 127 KWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 186
           K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G
Sbjct: 122 K-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG 181

Query: 187 LDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 246
              +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 182 -GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 241

Query: 247 GPLENLLDHLDNPVANNAWVYATKFAPGS 267
           GP+ENL DHL +PVANNAW YAT F PG+
Sbjct: 242 GPIENLFDHLADPVANNAWSYATNFVPGN 265

[Close]

BLAST of Cla97C10G190440 vs. TAIR10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2)

HSP 1 Score: 357.5 bits (916), Expect = 7.4e-99
Identity = 183/268 (68.28%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 7   ATSATLLRATPFLGQTR-GSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLG 66
           ATSA  ++ + F GQT    S + ++ V  +G G+ TM          +WYGPDR KYLG
Sbjct: 2   ATSA--IQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLG 61

Query: 67  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 126
           PFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L 
Sbjct: 62  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 121

Query: 127 KWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 186
           K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G
Sbjct: 122 K-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG 181

Query: 187 LDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 246
              +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 182 -GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 241

Query: 247 GPLENLLDHLDNPVANNAWVYATKFAPG 266
           GP+ENL DHL +PVANNAW YAT F PG
Sbjct: 242 GPIENLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Cla97C10G190440 vs. TAIR10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3)

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-97
Identity = 181/269 (67.29%), Postives = 203/269 (75.46%), Query Frame = 0


Query: 7   ATSATLLRATPFLGQTRGSSQNSLRDVV--AMGTGKYTM-------GNDLWYGPDRVKYL 66
           ATSA  ++ + F GQT     N L   +  + G G+  M          +WYGPDR KYL
Sbjct: 2   ATSA--IQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYL 61

Query: 67  GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 126
           GPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L
Sbjct: 62  GPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 121

Query: 127 EKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 186
            K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI 
Sbjct: 122 SK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIG 181

Query: 187 GLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 246
           G   +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 182 G-GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 241

Query: 247 KGPLENLLDHLDNPVANNAWVYATKFAPG 266
           KGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 242 KGPIENLFDHIADPVANNAWAYATNFVPG 265

[Close]

BLAST of Cla97C10G190440 vs. TAIR10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 350.9 bits (899), Expect = 6.9e-97
Identity = 174/266 (65.41%), Postives = 203/266 (76.32%), Query Frame = 0


Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MA ++ A +   ++ +P   +  GS + ++R  VA   G        WYG DRVKYLGPF
Sbjct: 6   MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGP---SGSPWYGSDRVKYLGPF 65

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           S ++PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + 
Sbjct: 66  SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR- 125

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
             V F E VWFKAG+QIF++GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G  
Sbjct: 126 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNG 185

Query: 181 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
            +GE  D LYPGG  FDPLGLA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 186 PLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 245

Query: 241 LENLLDHLDNPVANNAWVYATKFAPG 266
           +ENL DHL +PV NNAW +AT F PG
Sbjct: 246 IENLADHLADPVNNNAWAFATNFVPG 266

The following BLAST results are available for this feature:

BLAST of Cla97C10G190440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452292.1	5.8e-150	98.47	PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]	[more]
XP_023553506.1	3.2e-148	96.62	chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022985252.1	2.7e-147	96.62	chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]	[more]
XP_004149296.1	4.6e-147	96.56	PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus] >...	[more]
XP_022929511.1	4.6e-147	96.95	chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cla97C10G190440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUM8\|A0A1S3BUM8_CUCME	3.8e-150	98.47	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0L6I8\|A0A0A0L6I8_CUCSA	3.0e-147	96.56	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A2P5FFF8\|A0A2P5FFF8_9ROSA	3.3e-146	94.36	Chlorophyll a-b binding protein, chloroplastic OS=Trema orientalis OX=63057 GN=T...	[more]
tr\|A0A2P5B6Y8\|A0A2P5B6Y8_PARAD	2.2e-145	94.66	Chlorophyll a-b binding protein, chloroplastic OS=Parasponia andersonii OX=3476 ...	[more]
tr\|W9RGN8\|W9RGN8_9ROSA	6.3e-145	94.66	Chlorophyll a-b binding protein, chloroplastic OS=Morus notabilis OX=981085 GN=L...	[more]

BLAST of Cla97C10G190440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27489\|CB23_SOLLC	4.4e-141	90.46	Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
sp\|Q9S7M0\|CB3_ARATH	3.7e-140	88.72	Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|P27523\|CB23_HORVU	1.4e-134	85.82	Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg...	[more]
sp\|P14278\|CB24_SOLLC	5.8e-101	70.61	Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
sp\|P12328\|CB21_LEMGI	3.7e-100	69.06	Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba OX...	[more]

BLAST of Cla97C10G190440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54270.1	2.0e-141	88.72	light-harvesting chlorophyll B-binding protein 3	[more]
AT2G05100.1	1.9e-99	68.77	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	7.4e-99	68.28	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	2.4e-97	67.29	photosystem II light harvesting complex gene 2.3	[more]
AT1G29930.1	6.9e-97	65.41	chlorophyll A/B binding protein 1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009635	response to herbicide
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0009769	photosynthesis, light harvesting in photosystem II
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009536	plastid
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0031409	pigment binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G190440.1	Cla97C10G190440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	G3DSA:1.10.3460.10		coord: 55..259 e-value: 9.9E-87 score: 291.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..232 e-value: 8.3E-50 score: 169.4
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..266
None	No IPR available	PANTHER	PTHR21649:SF11	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..266
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 47..263

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C10G190440	Cla011748	Watermelon (97103) v1	wmwmbB148
Cla97C10G190440	Csa3G099680	Cucumber (Chinese Long) v2	cuwmbB181
Cla97C10G190440	MELO3C016556	Melon (DHL92) v3.5.1	mewmbB431
Cla97C10G190440	ClCG10G006490	Watermelon (Charleston Gray)	wcgwmbB038
Cla97C10G190440	CSPI03G05850	Wild cucumber (PI 183967)	cpiwmbB184
Cla97C10G190440	Cucsa.074470	Cucumber (Gy14) v1	cgywmbB070
Cla97C10G190440	CmaCh04G009180	Cucurbita maxima (Rimu)	cmawmbB718
Cla97C10G190440	CmaCh16G008080	Cucurbita maxima (Rimu)	cmawmbB336
Cla97C10G190440	CmoCh04G009860	Cucurbita moschata (Rifu)	cmowmbB689
Cla97C10G190440	CmoCh16G008630	Cucurbita moschata (Rifu)	cmowmbB322
Cla97C10G190440	Lsi05G006850	Bottle gourd (USVL1VR-Ls)	lsiwmbB322
Cla97C10G190440	CsGy3G005970	Cucumber (Gy14) v2	cgybwmbB174
Cla97C10G190440	MELO3C016556.2	Melon (DHL92) v3.6.1	medwmbB416
Cla97C10G190440	CsaV3_3G005950	Cucumber (Chinese Long) v3	cucwmbB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C10G190440	Watermelon (97103) v2	wmbwmbB050
Cla97C10G190440	Silver-seed gourd	carwmbB0220
Cla97C10G190440	Silver-seed gourd	carwmbB0686
Cla97C10G190440	Silver-seed gourd	carwmbB0944
Cla97C10G190440	Cucumber (Gy14) v2	cgybwmbB016
Cla97C10G190440	Cucumber (Gy14) v1	cgywmbB198
Cla97C10G190440	Cucurbita maxima (Rimu)	cmawmbB018
Cla97C10G190440	Cucurbita maxima (Rimu)	cmawmbB218
Cla97C10G190440	Cucurbita maxima (Rimu)	cmawmbB444
Cla97C10G190440	Cucurbita moschata (Rifu)	cmowmbB006
Cla97C10G190440	Cucurbita moschata (Rifu)	cmowmbB202
Cla97C10G190440	Cucurbita moschata (Rifu)	cmowmbB425
Cla97C10G190440	Wild cucumber (PI 183967)	cpiwmbB016
Cla97C10G190440	Cucumber (Chinese Long) v3	cucwmbB015
Cla97C10G190440	Cucumber (Chinese Long) v2	cuwmbB016
Cla97C10G190440	Bottle gourd (USVL1VR-Ls)	lsiwmbB163
Cla97C10G190440	Bottle gourd (USVL1VR-Ls)	lsiwmbB264
Cla97C10G190440	Watermelon (Charleston Gray)	wcgwmbB175
Cla97C10G190440	Watermelon (97103) v1	wmwmbB114
Cla97C10G190440	Wax gourd	wgowmbB003