Cla011748 (gene) Watermelon (97103) v1

Overview
NameCla011748
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionChlorophyll a-b binding protein 13, chloroplastic (AHRD V1 ***- CB23_SOLLC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
LocationChr7 : 10949114 .. 10950809 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGTCTCACTCACTCTGTTTCTTCTGTCTATATATATGTCTCTGTTTTTGGGGTGTTCTTGAAGATTGATGGTGTTTTTTTTTTCTTTTTCTTTTTCTTTCAAATTTGAATAGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTAGTTCAATTTAGTTAATGTATTCTCAAATTTGGTATTTGGTTAAGTTTGATCTTTGTATGTCGAATTTGGTATTCTATTTTTAAAAAATGATTATGTTGGTTTCTATTTGTAAAATTTTAACATAAAGTTTAGAAAAAAGAGTTACTTTGGATCAAATTGAATCAGAGGAAGATAAAGTAGTATTTAATTTTATTGATGAATCCAAAAGTTTCAACTTTCAGTTAATTATTAATTTAATACAGTTTCGGAGTAATAGGTCATTTGTTCAAATTAATATTATGTTACTTTTTCTCTGATTAATATTGATTTACTTTCTTGCGTATTTTATAAATTTTTAAGTCTACAATTGTTAGGGTAGGTTAAAAGTCTAATTCATATAATTAAATTTAGATTAAATTACTATTTTGGTTTTGAGATTTGTTCAATTTTAGTCATTAAATACATGTATTTTTAGTAAATCTTAAATTTAGTCACTCAATTTTTTTTTAATGAAATTGGCTAAATTTTAATAAGAATTTTTATATAAAAAAAATATAATAGGTGAATATGTTTTCAAAATTTAGTAAAAATATTAATAGATAAAAAAGTTAAAAAAATCAACCATAATTAAGATATAGACTAAATTTAAAATTTATTAAAAATATAAAAATTAAAATTGTCAAAAAAAAAAATTAAAAAAAATGGAAACTCTAAATTTCTCATAGTGAAATCTATCCCTTAAACTTGTAGGTTGATTCAACACCGCCAATTAAATTTTGAAAATTAAATGATGAATTTGCAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

mRNA sequence

ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

Coding sequence (CDS)

ATGGCCGCCACAGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA

Protein sequence

MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Homology
[Close]
BLAST of Cla011748 vs. Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-139
Identity = 237/262 (90.46%), Postives = 249/262 (95.04%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S T+++ATPFLGQT+ +  N LRDVVAMG+ ++TM NDLWYGPDRVKYLGPFSAQT
Sbjct: 6   ATASSTTVVKATPFLGQTKNA--NPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQT 65

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI PEVLEKW+KVD
Sbjct: 66  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVD 125

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIF++GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGE
Sbjct: 126 FKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGE 185

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 186 GNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 245

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PG+
Sbjct: 246 DHLDNPVANNAWVYATKFVPGA 265

[Close]
BLAST of Cla011748 vs. Swiss-Prot
Match: CB3_ARATH (Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=LHCB3 PE=1 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 8.9e-139
Identity = 236/266 (88.72%), Postives = 251/266 (94.36%), Query Frame = 1 

Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           MA+T T++S+ +L  T FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MASTFTSSSS-VLTPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           S QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+KW
Sbjct: 61  SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           ++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLD
Sbjct: 121 VRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLD 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAW +ATKFAPG+
Sbjct: 241 ENLLDHLDNPVANNAWAFATKFAPGA 265

[Close]
BLAST of Cla011748 vs. Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 2.5e-133
Identity = 230/268 (85.82%), Postives = 245/268 (91.42%), Query Frame = 1 

Query: 1   MAATA-TATSATLLRATPFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLG 60
           MA+T   A S  ++  TPFL GQ R +S + LRD+ A   G+ TMGNDLWYGPDRVKYLG
Sbjct: 1   MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 60

Query: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 120
           PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGC+ PEVL+
Sbjct: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 120

Query: 121 KWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
           KW+ V+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRING
Sbjct: 121 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 180

Query: 181 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
           LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLLDHLDNPVANNAWVYATKFAPGS 267
           PLENL DHLD+PVANNAWV+ATKFAPGS
Sbjct: 241 PLENLFDHLDDPVANNAWVFATKFAPGS 268

[Close]
BLAST of Cla011748 vs. Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.5e-98
Identity = 185/262 (70.61%), Postives = 205/262 (78.24%), Query Frame = 1 

Query: 13  LRATPFLGQTRGSSQNS-LRDVVAMGTGKYTMGN-------DLWYGPDRVKYLGPFSAQT 72
           ++ + F+GQ  G SQN  +R V   G G+ TM          +WYG DR KYLGPFS QT
Sbjct: 6   IQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQT 65

Query: 73  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 132
           PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L K   V 
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVK 125

Query: 133 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 192
           F E VWFKAG+QIF+EGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GE
Sbjct: 126 FGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG-GPLGE 185

Query: 193 GND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 252
           G D +YPGG  FDPLGLADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 186 GLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 245

Query: 253 LDHLDNPVANNAWVYATKFAPG 266
            DH+++PVANNAW YAT F PG
Sbjct: 246 SDHINDPVANNAWAYATNFVPG 264

[Close]
BLAST of Cla011748 vs. Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.5e-98
Identity = 183/265 (69.06%), Postives = 206/265 (77.74%), Query Frame = 1 

Query: 9   SATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGN-------DLWYGPDRVKYLGPFS 68
           +A+ ++++ F GQT    ++ L   V +  G+++M          +WYG DR K+LGPFS
Sbjct: 2   AASAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61

Query: 69  AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWL 128
            QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGCI PE+L K  
Sbjct: 62  EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK-N 121

Query: 129 KVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDG 188
            V F E VWFKAGAQIF+EGGLDYLGNPNLVHAQSILA+   QVVLMGL+EG+R+ G   
Sbjct: 122 GVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GP 181

Query: 189 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 248
           +GEG D LYPGG  FDPLGLADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 182 LGEGLDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 241

Query: 249 ENLLDHLDNPVANNAWVYATKFAPG 266
           ENL DH+ +PVANNAW +AT F PG
Sbjct: 242 ENLADHIADPVANNAWAFATNFVPG 263

[Close]
BLAST of Cla011748 vs. TrEMBL
Match: A0A0A0L6I8_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_3G099680 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 6.9e-146
Identity = 253/262 (96.56%), Postives = 256/262 (97.71%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA +ATLLRATPFLGQ R S QN LRDVVAMGTGKYTM NDLWYGPDRVKYLGPFSAQT
Sbjct: 3   ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLD+PVANNAWVYATKFAPGS
Sbjct: 243 DHLDDPVANNAWVYATKFAPGS 264

[Close]
BLAST of Cla011748 vs. TrEMBL
Match: W9RGN8_9ROSA (Chlorophyll a-b binding protein, chloroplastic OS=Morus notabilis GN=L484_018739 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-143
Identity = 248/262 (94.66%), Postives = 253/262 (96.56%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S+ LLR TPFLGQ RG S  SLRDVV MGTGKYTMGN+LWYGPDRVKYLGPFSAQT
Sbjct: 3   ATASSSALLRPTPFLGQNRGQSSTSLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVD
Sbjct: 63  PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PGS
Sbjct: 243 DHLDNPVANNAWVYATKFVPGS 264

[Close]
BLAST of Cla011748 vs. TrEMBL
Match: M5X1T0_PRUPE (Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica GN=PRUPE_ppa009987mg PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.2e-143
Identity = 249/269 (92.57%), Postives = 259/269 (96.28%), Query Frame = 1 

Query: 1   MAAT---ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYL 60
           MA+T   ATA+S+TLLR TPFLGQTRG S N+LRDV  MGTGKYTMGN+LWYGPDRVKYL
Sbjct: 1   MASTLMAATASSSTLLRPTPFLGQTRGPSFNTLRDVAPMGTGKYTMGNELWYGPDRVKYL 60

Query: 61  GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 120
           GPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL
Sbjct: 61  GPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 120

Query: 121 EKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 180
           EKW++VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRIN
Sbjct: 121 EKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRIN 180

Query: 181 GLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 240
           GLDGVGEGN+LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLLDHLDNPVANNAWVYATKFAPGS 267
           GPLENLLDHLDNPVANNAWVYATKF PGS
Sbjct: 241 GPLENLLDHLDNPVANNAWVYATKFVPGS 269

[Close]
BLAST of Cla011748 vs. TrEMBL
Match: C6T868_SOYBN (Chlorophyll a-b binding protein, chloroplastic OS=Glycine max GN=GLYMA_13G282000 PE=2 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 4.2e-143
Identity = 248/267 (92.88%), Postives = 259/267 (97.00%), Query Frame = 1 

Query: 1   MAATA-TATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGP 60
           MAAT   ATS+  L+ATPFLGQ +G++ N+LRDVV+MGTGKYTMGNDLWYGPDRVKYLGP
Sbjct: 1   MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGP 60

Query: 61  FSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK 120
           FSAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK
Sbjct: 61  FSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK 120

Query: 121 WLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 180
           WL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RINGL
Sbjct: 121 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGL 180

Query: 181 DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLLDHLDNPVANNAWVYATKFAPGS 267
           LENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LENLLDHLDNPVANNAWVYATKFAPGS 267

[Close]
BLAST of Cla011748 vs. TrEMBL
Match: A0A0B2RQS6_GLYSO (Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja GN=glysoja_001507 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 4.2e-143
Identity = 248/267 (92.88%), Postives = 259/267 (97.00%), Query Frame = 1 

Query: 1   MAATA-TATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGP 60
           MAAT   ATS+  L+ATPFLGQ +G++ N+LRDVV+MGTGKYTMGNDLWYGPDRVKYLGP
Sbjct: 1   MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGP 60

Query: 61  FSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK 120
           FSAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK
Sbjct: 61  FSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEK 120

Query: 121 WLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 180
           WL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RINGL
Sbjct: 121 WLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGL 180

Query: 181 DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 DGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLLDHLDNPVANNAWVYATKFAPGS 267
           LENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LENLLDHLDNPVANNAWVYATKFAPGS 267

[Close]
BLAST of Cla011748 vs. NCBI nr
Match: gi|659102746|ref|XP_008452292.1| (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 1.2e-148
Identity = 258/262 (98.47%), Postives = 259/262 (98.85%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           +TATSATLLRATPFLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT
Sbjct: 3   STATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKFAPGS
Sbjct: 243 DHLDNPVANNAWVYATKFAPGS 264

[Close]
BLAST of Cla011748 vs. NCBI nr
Match: gi|449463148|ref|XP_004149296.1| (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 9.9e-146
Identity = 253/262 (96.56%), Postives = 256/262 (97.71%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA +ATLLRATPFLGQ R S QN LRDVVAMGTGKYTM NDLWYGPDRVKYLGPFSAQT
Sbjct: 3   ATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLD+PVANNAWVYATKFAPGS
Sbjct: 243 DHLDDPVANNAWVYATKFAPGS 264

[Close]
BLAST of Cla011748 vs. NCBI nr
Match: gi|703119118|ref|XP_010101783.1| (Chlorophyll a-b binding protein 13 [Morus notabilis])

HSP 1 Score: 516.9 bits (1330), Expect = 2.1e-143
Identity = 248/262 (94.66%), Postives = 253/262 (96.56%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           ATA+S+ LLR TPFLGQ RG S  SLRDVV MGTGKYTMGN+LWYGPDRVKYLGPFSAQT
Sbjct: 3   ATASSSALLRPTPFLGQNRGQSSTSLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVD
Sbjct: 63  PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PGS
Sbjct: 243 DHLDNPVANNAWVYATKFVPGS 264

[Close]
BLAST of Cla011748 vs. NCBI nr
Match: gi|657954166|ref|XP_008366442.1| (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Malus domestica])

HSP 1 Score: 516.5 bits (1329), Expect = 2.7e-143
Identity = 246/262 (93.89%), Postives = 256/262 (97.71%), Query Frame = 1 

Query: 5   ATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 64
           A A+S+TLLR TPFLGQ+RG S N+L+DVV MGTGKYTMGNDLWYGPDRVKYLGPFSAQT
Sbjct: 3   AAASSSTLLRTTPFLGQSRGPSFNTLKDVVPMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 62

Query: 65  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVD 124
           PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW++VD
Sbjct: 63  PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVD 122

Query: 125 FKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGE 184
           FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGE
Sbjct: 123 FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGE 182

Query: 185 GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 244
           GN+LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL
Sbjct: 183 GNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 242

Query: 245 DHLDNPVANNAWVYATKFAPGS 267
           DHLDNPVANNAWVYATKF PGS
Sbjct: 243 DHLDNPVANNAWVYATKFVPGS 264

[Close]
BLAST of Cla011748 vs. NCBI nr
Match: gi|1009110653|ref|XP_015896717.1| (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 516.2 bits (1328), Expect = 3.5e-143
Identity = 248/266 (93.23%), Postives = 254/266 (95.49%), Query Frame = 1 

Query: 1   MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPF 60
           M   ATA+S+TLLR TPFLGQTR SS N+ RDVV MGT KYTMGNDLWYGPDRVKYLGPF
Sbjct: 1   MLMAATASSSTLLRLTPFLGQTRSSSSNAFRDVVPMGTAKYTMGNDLWYGPDRVKYLGPF 60

Query: 61  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120
           SAQTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW
Sbjct: 61  SAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 120

Query: 121 LKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 180
           ++VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL 
Sbjct: 121 VRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLP 180

Query: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
           GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 GVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLLDHLDNPVANNAWVYATKFAPGS 267
           ENLLDHLDNPVANNAWVYATKF PGS
Sbjct: 241 ENLLDHLDNPVANNAWVYATKFVPGS 266

The following BLAST results are available for this feature:
BLAST of Cla011748 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CB23_SOLLC2.4e-13990.46Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB... [more]
CB3_ARATH8.9e-13988.72Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=LHCB... [more]
CB23_HORVU2.5e-13385.82Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg... [more]
CB24_SOLLC1.5e-9870.61Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4... [more]
CB21_LEMGI4.5e-9869.06Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE... [more]
BLAST of Cla011748 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6I8_CUCSA6.9e-14696.56Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_3G09968... [more]
W9RGN8_9ROSA1.4e-14394.66Chlorophyll a-b binding protein, chloroplastic OS=Morus notabilis GN=L484_018739... [more]
M5X1T0_PRUPE3.2e-14392.57Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica GN=PRUPE_ppa009... [more]
C6T868_SOYBN4.2e-14392.88Chlorophyll a-b binding protein, chloroplastic OS=Glycine max GN=GLYMA_13G282000... [more]
A0A0B2RQS6_GLYSO4.2e-14392.88Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja GN=glysoja_001507... [more]
BLAST of Cla011748 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102746|ref|XP_008452292.1|1.2e-14898.47PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo][more]
gi|449463148|ref|XP_004149296.1|9.9e-14696.56PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus][more]
gi|703119118|ref|XP_010101783.1|2.1e-14394.66Chlorophyll a-b binding protein 13 [Morus notabilis][more]
gi|657954166|ref|XP_008366442.1|2.7e-14393.89PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Malus domestica][more]
gi|1009110653|ref|XP_015896717.1|3.5e-14393.23PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0009765photosynthesis, light harvesting
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0015979 photosynthesis
biological_process GO:0009644 response to high light intensity
biological_process GO:0009635 response to herbicide
biological_process GO:0009737 response to abscisic acid
biological_process GO:0010119 regulation of stomatal movement
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0009416 response to light stimulus
biological_process GO:0009769 photosynthesis, light harvesting in photosystem II
cellular_component GO:0009579 thylakoid
cellular_component GO:0009536 plastid
cellular_component GO:0009507 chloroplast
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016020 membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0031409 pigment binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0019904 protein domain specific binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011748Cla011748.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..266
score: 1.4E
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 65..232
score: 2.2
IPR023329Chlorophyll a/b binding protein domainGENE3DG3DSA:1.10.3460.10coord: 57..258
score: 2.9
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 47..263
score: 1.03
NoneNo IPR availablePANTHERPTHR21649:SF11SUBFAMILY NOT NAMEDcoord: 1..266
score: 1.4E