Cla97C10G185100 (gene) Watermelon (97103) v2

Overview
NameCla97C10G185100
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionRING finger protein 44-like
LocationCla97Chr10 : 545137 .. 545550 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTCAACAAGGTGTTCTTCTTCTTCTACAACTTCATCGGCTTCCGAAGCAAGCCGAGATTCAAACAAGCAACTCTATTTTCTCGCTGTGGCAATTTGAACCTCCGACCTATGACACCTGATGATTGTAGTGTCGTAGCTGTTTCAAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGGAACAAGGGGGTTGGCACGAGTGTTCTTCCTTGCTTGCACCAGTTTCACAAGGTATGTGTCGAACGATGGTTCAACGAGTGTCGGAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGAAAGTCATGAAGATGGGAGTAATCAAATACTCACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

mRNA sequence

ATGGTTTTCAACAAGGTGTTCTTCTTCTTCTACAACTTCATCGGCTTCCGAAGCAAGCCGAGATTCAAACAAGCAACTCTATTTTCTCGCTGTGGCAATTTGAACCTCCGACCTATGACACCTGATGATTGTAGTGTCGTAGCTGTTTCAAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGGAACAAGGGGGTTGGCACGAGTGTTCTTCCTTGCTTGCACCAGTTTCACAAGGTATGTGTCGAACGATGGTTCAACGAGTGTCGGAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGAAAGTCATGAAGATGGGAGTAATCAAATACTCACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

Coding sequence (CDS)

ATGGTTTTCAACAAGGTGTTCTTCTTCTTCTACAACTTCATCGGCTTCCGAAGCAAGCCGAGATTCAAACAAGCAACTCTATTTTCTCGCTGTGGCAATTTGAACCTCCGACCTATGACACCTGATGATTGTAGTGTCGTAGCTGTTTCAAGTCCTGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCGAGTATGGGGAACAAGGGGGTTGGCACGAGTGTTCTTCCTTGCTTGCACCAGTTTCACAAGGTATGTGTCGAACGATGGTTCAACGAGTGTCGGAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGAAAGTCATGAAGATGGGAGTAATCAAATACTCACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

Protein sequence

MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSNQILTDEMVIWFSSFHTSGF
Homology
[Close]
BLAST of Cla97C10G185100 vs. NCBI nr
Match: XP_004146205.1 (PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus] >KGN55642.1 hypothetical protein Csa_3G002620 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.7e-60
Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = 0 

Query: 1   MVFNKVFFFFY-NFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGE 60
           M+FNKVFFFFY N IGFRS+PRFKQAT   R GN +LRP+  DDC+++A+SS EKALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSSMGN------KGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESH 120
           TCCVCLSSMGN      KGVGTSVLPCLH+FHKVCVERWF ECRRTCPICRYSMEGG SH
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120

Query: 121 EDGSNQILTDEMVIWFSSFHTSGF 138
           ED +NQILTDEMVIWFSSFHTSGF
Sbjct: 121 EDETNQILTDEMVIWFSSFHTSGF 144

[Close]
BLAST of Cla97C10G185100 vs. NCBI nr
Match: XP_022145297.1 (E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 4.9e-44
Identity = 93/141 (65.96%), Postives = 106/141 (75.18%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSV---VAVSSPEKALE 60
           MVFN+VFFFFYNFIGFR +P+ KQ TL    G+  LR M  D+  +   V +SS  KALE
Sbjct: 1   MVFNRVFFFFYNFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDESRIPDCVTLSSSGKALE 60

Query: 61  GE-TCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDG 120
           GE  CCVCLSS+  +G+ TSVLPCLH+FHKVCV+RWF E RRTCPICRYSMEG     + 
Sbjct: 61  GEMCCCVCLSSI-EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEGAGQGNEN 120

Query: 121 SNQILTDEMVIWFSSFHTSGF 138
             QILTDEMVIWFSSFHTSGF
Sbjct: 121 GTQILTDEMVIWFSSFHTSGF 140

[Close]
BLAST of Cla97C10G185100 vs. NCBI nr
Match: EXC35312.1 (E3 ubiquitin-protein ligase Arkadia [Morus notabilis])

HSP 1 Score: 124.8 bits (312), Expect = 2.3e-25
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGET 60
           MV NK      NFI  + +PR K+A         N+     +     A  S   A EGE 
Sbjct: 1   MVLNKFLSVICNFISLKGQPRLKEAPASWEVIEPNVELKLEEGLDESAAESSTGA-EGEF 60

Query: 61  CCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSNQI 120
           CCVCLS++  +G  TS+LPC H+FHK CVERWF+ C++TCPICR+SME  + +E    ++
Sbjct: 61  CCVCLSTLEEEGEETSLLPCQHKFHKDCVERWFSLCKKTCPICRFSMEEDKCYE---GEV 120

Query: 121 LTDEMVIWFSSFHTSGF 138
           LT+EMVI+FSSFH +GF
Sbjct: 121 LTEEMVIYFSSFHAAGF 133

[Close]
BLAST of Cla97C10G185100 vs. NCBI nr
Match: XP_021622976.1 (E3 ubiquitin-protein ligase RHA2A-like [Manihot esculenta] >OAY60918.1 hypothetical protein MANES_01G149700 [Manihot esculenta])

HSP 1 Score: 124.4 bits (311), Expect = 3.0e-25
Identity = 68/139 (48.92%), Postives = 80/139 (57.55%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKAL--EG 60
           M   K+  F  NFIG R + R K    +                     SS  KA+  EG
Sbjct: 1   MALKKLASFICNFIGLRRQLRIKDVIAYEAMALDVSENAKEGVLQSAGGSSSAKAMEAEG 60

Query: 61  ETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSN 120
           E CCVCLS M N G+   VLPCLH+FHKVC+ERWFN CR+TCPICR+SM G E       
Sbjct: 61  EHCCVCLSRM-NGGLDMRVLPCLHKFHKVCIERWFNVCRKTCPICRFSM-GEEERSHKRE 120

Query: 121 QILTDEMVIWFSSFHTSGF 138
           + LT+EMVIWFSSFH +GF
Sbjct: 121 EQLTEEMVIWFSSFHVAGF 137

[Close]
BLAST of Cla97C10G185100 vs. NCBI nr
Match: XP_021656440.1 (E3 ubiquitin-protein ligase RHA2A [Hevea brasiliensis])

HSP 1 Score: 122.9 bits (307), Expect = 8.7e-25
Identity = 65/137 (47.45%), Postives = 83/137 (60.58%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGET 60
           MVF K+  F +NFIG R + R K  T +     + L      D  + ++     A EGE 
Sbjct: 1   MVFKKLASFIFNFIGLRRQLRIKDVTSYE---TMALEVSENADGMLKSLGGSSSA-EGEF 60

Query: 61  CCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSNQI 120
           CCVCLS + N G     LPCLH+FHKVC++RWF  CR+TCP+CR++ME  E       Q 
Sbjct: 61  CCVCLSRL-NGGDDMRALPCLHKFHKVCIDRWFKVCRKTCPVCRFAMEEKERSYKREEQ- 120

Query: 121 LTDEMVIWFSSFHTSGF 138
           LT+EMVIWFSSFH +GF
Sbjct: 121 LTEEMVIWFSSFHVAGF 131

[Close]
BLAST of Cla97C10G185100 vs. TrEMBL
Match: tr|A0A0A0L4W7|A0A0A0L4W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.5e-60
Identity = 115/144 (79.86%), Postives = 125/144 (86.81%), Query Frame = 0 

Query: 1   MVFNKVFFFFY-NFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGE 60
           M+FNKVFFFFY N IGFRS+PRFKQAT   R GN +LRP+  DDC+++A+SS EKALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSSMGN------KGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESH 120
           TCCVCLSSMGN      KGVGTSVLPCLH+FHKVCVERWF ECRRTCPICRYSMEGG SH
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120

Query: 121 EDGSNQILTDEMVIWFSSFHTSGF 138
           ED +NQILTDEMVIWFSSFHTSGF
Sbjct: 121 EDETNQILTDEMVIWFSSFHTSGF 144

[Close]
BLAST of Cla97C10G185100 vs. TrEMBL
Match: tr|W9SMW3|W9SMW3_9ROSA (E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKALEGET 60
           MV NK      NFI  + +PR K+A         N+     +     A  S   A EGE 
Sbjct: 1   MVLNKFLSVICNFISLKGQPRLKEAPASWEVIEPNVELKLEEGLDESAAESSTGA-EGEF 60

Query: 61  CCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSNQI 120
           CCVCLS++  +G  TS+LPC H+FHK CVERWF+ C++TCPICR+SME  + +E    ++
Sbjct: 61  CCVCLSTLEEEGEETSLLPCQHKFHKDCVERWFSLCKKTCPICRFSMEEDKCYE---GEV 120

Query: 121 LTDEMVIWFSSFHTSGF 138
           LT+EMVI+FSSFH +GF
Sbjct: 121 LTEEMVIYFSSFHAAGF 133

[Close]
BLAST of Cla97C10G185100 vs. TrEMBL
Match: tr|A0A2C9WNJ5|A0A2C9WNJ5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G149700 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25
Identity = 68/139 (48.92%), Postives = 80/139 (57.55%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRCGNLNLRPMTPDDCSVVAVSSPEKAL--EG 60
           M   K+  F  NFIG R + R K    +                     SS  KA+  EG
Sbjct: 1   MALKKLASFICNFIGLRRQLRIKDVIAYEAMALDVSENAKEGVLQSAGGSSSAKAMEAEG 60

Query: 61  ETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGESHEDGSN 120
           E CCVCLS M N G+   VLPCLH+FHKVC+ERWFN CR+TCPICR+SM G E       
Sbjct: 61  EHCCVCLSRM-NGGLDMRVLPCLHKFHKVCIERWFNVCRKTCPICRFSM-GEEERSHKRE 120

Query: 121 QILTDEMVIWFSSFHTSGF 138
           + LT+EMVIWFSSFH +GF
Sbjct: 121 EQLTEEMVIWFSSFHVAGF 137

[Close]
BLAST of Cla97C10G185100 vs. TrEMBL
Match: tr|U5GF03|U5GF03_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G109600v3 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-24
Identity = 70/146 (47.95%), Postives = 83/146 (56.85%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFKQATLFSRC--------GNLNLRPMTPDDCSVVAVSSP 60
           MV  K   F Y+FIG R  PR K A   + C        GN+    +   +  V + SS 
Sbjct: 1   MVLKKFVSFVYSFIGLRWHPRIKDAAAAAACRRITVDVSGNVKQGVL---ESPVGSSSSE 60

Query: 61  EKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNE-CRRTCPICRYSMEGGE 120
               EGE CCVCLS +      TS LPCLH+FHKVC+E WFN  CRRTCP+CR SM GGE
Sbjct: 61  IIEAEGEYCCVCLSRL-KADEDTSALPCLHRFHKVCIEGWFNNVCRRTCPLCRSSM-GGE 120

Query: 121 SHEDGSNQILTDEMVIWFSSFHTSGF 138
                  +  T+EMVIWFSSFH +GF
Sbjct: 121 ERSHKREEQFTEEMVIWFSSFHVAGF 141

[Close]
BLAST of Cla97C10G185100 vs. TrEMBL
Match: tr|A0A2I4FD42|A0A2I4FD42_9ROSI (RING finger protein 165-like OS=Juglans regia OX=51240 GN=LOC108997662 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-24
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 0 

Query: 1   MVFNKVFFFFYNFIGFRSKPRFK--QATLFSRCGNLNLR------PMTPDDCSVVAVSSP 60
           M F K+  F Y+F+G R +P  K   +T +      +L+      PM+P        S  
Sbjct: 1   MDFRKLVSFLYDFLGPRVQPSLKGFPSTSYRGLKWEDLQKVKEDPPMSPHGSG----SRS 60

Query: 61  EKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGGES 120
            + LE E CCVCLS +  KG  T  LPCLH+FHKVCV+RWF+ CR+TCP+CR+S+ G ++
Sbjct: 61  VELLEVEQCCVCLSRL-KKGQDTRTLPCLHEFHKVCVDRWFDACRKTCPVCRFSIGGEDN 120

Query: 121 HEDGSNQILTDEMVIWFSSFHTSGF 138
                 ++LTDEMVIWFSSFH +GF
Sbjct: 121 FH--IQEVLTDEMVIWFSSFHVAGF 138

[Close]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match: sp|Q9H6Y7|RN167_HUMAN (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08
Identity = 28/95 (29.47%), Postives = 43/95 (45.26%), Query Frame = 0 

Query: 25  ATLFSRC----GNLNLRPMTPDDCSVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPC 84
           A + +RC      L    +T +    +     +K  + + C +CL      G    VLPC
Sbjct: 190 AVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEY-EDGDKLRVLPC 249

Query: 85  LHQFHKVCVERWFNECRRTCPICRYSMEGGESHED 116
            H +H  CV+ W  + R+TCPIC+  +  G   ED
Sbjct: 250 AHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDED 283

[Close]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match: sp|Q4R6Y5|ZNRF4_MACFA (E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 59  ETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNEC-RRTCPICRYSMEGGESHEDGS 118
           + C +CL     +G    +LPC H +H  C++ WF++  RR+CP+C+ S+ G E   D +
Sbjct: 307 DLCAICLDEY-EEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAGTEDSFDST 366

Query: 119 NQILTDE 125
               +DE
Sbjct: 367 TDSFSDE 372

[Close]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match: sp|Q91XF4|RN167_MOUSE (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 24/77 (31.17%), Postives = 37/77 (48.05%), Query Frame = 0 

Query: 39  MTPDDCSVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRR 98
           +T +    +     +K  E + C +CL      G    VLPC H +H  CV+ W  + R+
Sbjct: 208 LTKEQLKQIPTHDYQKGDEYDVCAICLDEY-EDGDKLRVLPCAHAYHSRCVDPWLTQTRK 267

Query: 99  TCPICRYSMEGGESHED 116
           TCPIC+  +  G   E+
Sbjct: 268 TCPICKQPVHRGPGDEE 283

[Close]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match: sp|Q5XIL0|RN167_RAT (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 23/77 (29.87%), Postives = 37/77 (48.05%), Query Frame = 0 

Query: 39  MTPDDCSVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRR 98
           +T +    +     +K  E + C +CL      G    +LPC H +H  CV+ W  + R+
Sbjct: 208 LTKEQLKQIPTHDYQKGDEYDVCAICLDEY-EDGDKLRILPCAHAYHSRCVDPWLTQTRK 267

Query: 99  TCPICRYSMEGGESHED 116
           TCPIC+  +  G   E+
Sbjct: 268 TCPICKQPVHRGPGDEE 283

[Close]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match: sp|Q5SPX3|RN215_MOUSE (RING finger protein 215 OS=Mus musculus OX=10090 GN=Rnf215 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-07
Identity = 35/94 (37.23%), Postives = 47/94 (50.00%), Query Frame = 0 

Query: 24  QATLFSRCGNLNLRPMTPDDC--SVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPCL 83
           Q  LF R     L  +    C  S  A S PE     ETC VCL    NK     VLPC 
Sbjct: 290 QEDLFKRRVVRRLASLKTRRCRLSRAAHSLPEPGT--ETCAVCLDYFCNK-QWLRVLPCK 349

Query: 84  HQFHKVCVERWFNECRRTCPICRYSMEGGESHED 116
           H+FH+ CV+ W    ++TCP+C++++ G    +D
Sbjct: 350 HEFHRDCVDPWL-MLQQTCPLCKFNVLGNHYSDD 379

[Close]
BLAST of Cla97C10G185100 vs. TAIR10
Match: AT3G51325.1 (RING/U-box superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 8.4e-14
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 57  EGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRR-TCPICRYSMEGGESHED 116
           E E C VCL  M  K V  S LPC H+FH +CV+ WFN  R+  CP+CR+S         
Sbjct: 22  EEECCSVCLMRMEAKDVIKS-LPCSHEFHSLCVDTWFNVSRKICCPLCRFS--------- 81

Query: 117 GSNQILTDEMVIWFSSFH 134
            +  +LTDE+++WFSSFH
Sbjct: 82  PTTILLTDELLLWFSSFH 89

[Close]
BLAST of Cla97C10G185100 vs. TAIR10
Match: AT4G32600.1 (RING/U-box superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 0 

Query: 46  VVAVSSPEKALEGE--TCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPIC 105
           V A +  E+A+ GE   CC+CL+   N       LPC H FHK CV++W  +   +CP+C
Sbjct: 346 VAAGTDNERAISGEDAVCCICLAKYAN-NEELRELPCSHFFHKECVDKWL-KINASCPLC 405

Query: 106 RYSMEGGESHEDGSNQ-ILT 123
           +   E GE + D ++Q ILT
Sbjct: 406 K--SEVGEKNSDLTSQGILT 421

[Close]
BLAST of Cla97C10G185100 vs. TAIR10
Match: AT3G55530.1 (RING/U-box superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-08
Identity = 25/69 (36.23%), Postives = 37/69 (53.62%), Query Frame = 0 

Query: 48  AVSSPEKALEGE-TCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYS 107
           + +  +K  E E TC VCL  +   G     LPCLHQFH  C++ W  + + TCP+C++ 
Sbjct: 197 SANESKKGTEDELTCSVCLEQV-TVGEIVRTLPCLHQFHAGCIDPWLRQ-QGTCPVCKFR 256

Query: 108 MEGGESHED 116
              G   +D
Sbjct: 257 AHSGWQEQD 263

[Close]
BLAST of Cla97C10G185100 vs. TAIR10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 20/60 (33.33%), Postives = 33/60 (55.00%), Query Frame = 0 

Query: 53  EKALEGETCCVCLSS--MGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPICRYSMEGG 111
           E++    TC +C+    +G K     +LPC H++H VC++ W   CR  CP+C+ +   G
Sbjct: 225 EESSTSVTCAICIDDYCVGEK---LRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTG 281

[Close]
BLAST of Cla97C10G185100 vs. TAIR10
Match: AT1G24580.1 (RING/U-box superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 21/61 (34.43%), Postives = 31/61 (50.82%), Query Frame = 0 

Query: 44  CSVVAVSSPEKALEGETCCVCLSSMGNKGVGTSVLPCLHQFHKVCVERWFNECRRTCPIC 103
           C  +     EK +E   CCVCL     +   + ++ C H FH+ C++ WF     TCP+C
Sbjct: 53  CENIEEEEEEKGVE---CCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLC 110

Query: 104 R 105
           R
Sbjct: 113 R 110

The following BLAST results are available for this feature:
BLAST of Cla97C10G185100 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146205.13.7e-6079.86PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus] >KGN55642.1... [more]
XP_022145297.14.9e-4465.96E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia][more]
EXC35312.12.3e-2546.72E3 ubiquitin-protein ligase Arkadia [Morus notabilis][more]
XP_021622976.13.0e-2548.92E3 ubiquitin-protein ligase RHA2A-like [Manihot esculenta] >OAY60918.1 hypotheti... [more]
XP_021656440.18.7e-2547.45E3 ubiquitin-protein ligase RHA2A [Hevea brasiliensis][more]
BLAST of Cla97C10G185100 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4W7|A0A0A0L4W7_CUCSA2.5e-6079.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1[more]
tr|W9SMW3|W9SMW3_9ROSA1.5e-2546.72E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 ... [more]
tr|A0A2C9WNJ5|A0A2C9WNJ5_MANES2.0e-2548.92Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G149700 PE=4 SV=... [more]
tr|U5GF03|U5GF03_POPTR1.3e-2447.95Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G109600v3 PE=... [more]
tr|A0A2I4FD42|A0A2I4FD42_9ROSI3.7e-2445.52RING finger protein 165-like OS=Juglans regia OX=51240 GN=LOC108997662 PE=4 SV=1[more]
BLAST of Cla97C10G185100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9H6Y7|RN167_HUMAN3.8e-0829.47E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1[more]
sp|Q4R6Y5|ZNRF4_MACFA1.5e-0734.33E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 S... [more]
sp|Q91XF4|RN167_MOUSE1.9e-0731.17E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1[more]
sp|Q5XIL0|RN167_RAT2.5e-0729.87E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ... [more]
sp|Q5SPX3|RN215_MOUSE5.6e-0737.23RING finger protein 215 OS=Mus musculus OX=10090 GN=Rnf215 PE=2 SV=1[more]
BLAST of Cla97C10G185100 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51325.18.4e-1447.44RING/U-box superfamily protein[more]
AT4G32600.12.4e-0840.00RING/U-box superfamily protein[more]
AT3G55530.19.0e-0836.23RING/U-box superfamily protein[more]
AT1G35630.11.2e-0733.33Protease-associated (PA) RING/U-box zinc finger family protein[more]
AT1G24580.11.5e-0734.43RING/U-box superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009987 cellular process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0061630 ubiquitin protein ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G185100.1Cla97C10G185100.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 61..103
e-value: 1.1E-5
score: 34.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 60..104
e-value: 1.4E-9
score: 38.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 61..104
score: 12.253
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 45..120
e-value: 5.7E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 10..134
NoneNo IPR availablePANTHERPTHR14155:SF194SUBFAMILY NOT NAMEDcoord: 10..134
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 50..107

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C10G185100Cla008916Watermelon (97103) v1wmwmbB056
Cla97C10G185100Cla014310Watermelon (97103) v1wmwmbB253
Cla97C10G185100Csa3G002620Cucumber (Chinese Long) v2cuwmbB181
Cla97C10G185100MELO3C013749Melon (DHL92) v3.5.1mewmbB430
Cla97C10G185100ClCG10G000530Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G185100CSPI03G00570Wild cucumber (PI 183967)cpiwmbB184
Cla97C10G185100Cucsa.322800Cucumber (Gy14) v1cgywmbB562
Cla97C10G185100CmaCh03G006660Cucurbita maxima (Rimu)cmawmbB673
Cla97C10G185100CmoCh03G006920Cucurbita moschata (Rifu)cmowmbB645
Cla97C10G185100CmoCh16G012980Cucurbita moschata (Rifu)cmowmbB320
Cla97C10G185100Lsi07G010850Bottle gourd (USVL1VR-Ls)lsiwmbB395
Cla97C10G185100Lsi01G005760Bottle gourd (USVL1VR-Ls)lsiwmbB118
Cla97C10G185100CsGy3G000530Cucumber (Gy14) v2cgybwmbB174
Cla97C10G185100MELO3C013749.2Melon (DHL92) v3.6.1medwmbB415
Cla97C10G185100Carg19461Silver-seed gourdcarwmbB0453
Cla97C10G185100CsaV3_3G000610Cucumber (Chinese Long) v3cucwmbB182
Cla97C10G185100Bhi11G000252Wax gourdwgowmbB004
Cla97C10G185100Bhi03G000614Wax gourdwgowmbB409
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C10G185100Cla97C01G019970Watermelon (97103) v2wmbwmbB003
The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G185100Silver-seed gourdcarwmbB0160
Cla97C10G185100Silver-seed gourdcarwmbB0427
Cla97C10G185100Silver-seed gourdcarwmbB0670
Cla97C10G185100Cucumber (Gy14) v2cgybwmbB400
Cla97C10G185100Cucumber (Gy14) v1cgywmbB019
Cla97C10G185100Cucurbita maxima (Rimu)cmawmbB337
Cla97C10G185100Cucurbita maxima (Rimu)cmawmbB446
Cla97C10G185100Cucurbita maxima (Rimu)cmawmbB846
Cla97C10G185100Cucurbita maxima (Rimu)cmawmbB878
Cla97C10G185100Cucurbita moschata (Rifu)cmowmbB427
Cla97C10G185100Cucurbita moschata (Rifu)cmowmbB820
Cla97C10G185100Cucurbita moschata (Rifu)cmowmbB852
Cla97C10G185100Wild cucumber (PI 183967)cpiwmbB444
Cla97C10G185100Cucumber (Chinese Long) v3cucwmbB438
Cla97C10G185100Cucumber (Chinese Long) v2cuwmbB420
Cla97C10G185100Melon (DHL92) v3.6.1medwmbB512
Cla97C10G185100Melon (DHL92) v3.5.1mewmbB520
Cla97C10G185100Watermelon (Charleston Gray)wcgwmbB095